RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 CDK17Q00537 523 aa17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 BFSP2Q13515 415 aa17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 BTBD8Q5XKL5 378 aa17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 PKN3Q6P5Z2 889 aa17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 TTC23LQ6PF05 361 aa17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 SPATA2Q9UM82 520 aa17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 TRIM24O15164 1050 aa17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 ASNA1O43681 348 aa17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 SGPL1O95470 568 aa17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 DDX5P17844 614 aaKnown RBP17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 GPAT2Q6NUI2 795 aa17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 FAM71DQ8N9W8 422 aa17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 GCNAQ96QF7 691 aa17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 TASP1Q9H6P5 420 aa17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 SNX9Q9Y5X1 595 aa17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 CST8O60676 142 aa17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 CACNB2Q08289 660 aaPredicted RBP17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 CHI3L2Q15782 390 aa17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 RSBN1Q5VWQ0 802 aaPredicted RBP17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 ZNF772Q68DY9 489 aaPredicted RBP17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 TTI2Q6NXR4 508 aa17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 FEZF2Q8TBJ5 459 aa17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 METTL5Q9NRN9 209 aaKnown RBP17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 SELENONQ9NZV5 590 aa17.91■□□□□ 0.46
HNRNPU-217ENST00000638952 PRKCEQ02156 737 aa17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 THEMIS2Q5TEJ8 643 aa17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 BNIPLQ7Z465 357 aa17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 PPIL6Q8IXY8 311 aa17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 KAZALD1Q96I82 304 aa17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 PABPC3Q9H361 631 aaKnown RBP17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 AGPAT3Q9NRZ7 376 aa17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 CLTCQ00610 1675 aaKnown RBP17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 EXTL3O43909 919 aa17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 SNRPAP09012 282 aaKnown RBP17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 MYL2P10916 166 aa17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 KLRK1P26718 216 aa17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 OTUD4Q01804 1114 aaKnown RBP17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 OTUD5Q96G74 571 aa17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 PAK5Q9P286 719 aa17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 CEP170BQ9Y4F5 1589 aaPredicted RBP17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 SKAP2O75563 359 aaPredicted RBP17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 CYP11B2P19099 503 aa17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 USP10Q14694 798 aaKnown RBP17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 ACAD10Q6JQN1 1059 aa17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 SCFD1Q8WVM8 642 aa17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 LRRC39Q96DD0 335 aa17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 TNIP3Q96KP6 325 aa17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 RECQLP46063 649 aaPredicted RBP17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 FNTAP49354 379 aa17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 COPAP53621 1224 aa17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 OASLQ15646 514 aaKnown RBP17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 CDKAL1Q5VV42 579 aa17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 SETD3Q86TU7 594 aaPredicted RBP17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 LINC00116Q8NCU8 138 aa17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 LACRTQ9GZZ8 138 aa17.9■□□□□ 0.46
HNRNPU-217ENST00000638952 CLPTM1O96005 669 aa17.89■□□□□ 0.46
HNRNPU-217ENST00000638952 OVGP1Q12889 678 aa17.89■□□□□ 0.46
HNRNPU-217ENST00000638952 TMEM132DQ14C87 1099 aa17.89■□□□□ 0.46
HNRNPU-217ENST00000638952 C16orf72Q14CZ0 275 aa17.89■□□□□ 0.46
HNRNPU-217ENST00000638952 ZNF677Q86XU0 584 aa17.89■□□□□ 0.46
HNRNPU-217ENST00000638952 SALL3Q9BXA9 1300 aa17.89■□□□□ 0.46
HNRNPU-217ENST00000638952 MED24O75448 989 aa17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 RBP5P82980 135 aa17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 TRIM65Q6PJ69 517 aa17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 APOBEC3FQ8IUX4 373 aaKnown RBP17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 ATG4AQ8WYN0 398 aa17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 PHTF1Q9UMS5 762 aa17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 KDM6AO15550 1401 aaPredicted RBP17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 MSH4O15457 936 aa17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 PRLRP16471 622 aa17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 PSMC6P62333 389 aa17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 ITIH4Q14624 930 aa17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 ANKS3Q6ZW76 656 aa17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 E2F7Q96AV8 911 aa17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 VCPKMTQ9H867 229 aa17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 C3orf70A6NLC5 250 aaPredicted RBP17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 NDUFA5Q16718 116 aa17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 KIZQ2M2Z5 673 aa17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 UBA3Q8TBC4 463 aa17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 SPON2Q9BUD6 331 aa17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 MOV10L1Q9BXT6 1211 aaKnown RBP17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 PDZK1P1A8MUH7 402 aa17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 AP3B1O00203 1094 aa17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 EEF2KO00418 725 aaKnown RBP17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 ZNF189O75820 626 aaPredicted RBP17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 CSTF3Q12996 717 aaKnown RBP17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 RNF219Q5W0B1 726 aaPredicted RBP17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 TADA1Q96BN2 335 aa17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 RMDN1Q96DB5 314 aa17.89■□□□□ 0.45
HNRNPU-217ENST00000638952 SCTRP47872 440 aa17.88■□□□□ 0.45
HNRNPU-217ENST00000638952 ZNF235Q14590 738 aa17.88■□□□□ 0.45
HNRNPU-217ENST00000638952 PRR5LQ6MZQ0 368 aa17.88■□□□□ 0.45
HNRNPU-217ENST00000638952 APPL2Q8NEU8 664 aa17.88■□□□□ 0.45
HNRNPU-217ENST00000638952 WNK4Q96J92 1243 aa17.88■□□□□ 0.45
HNRNPU-217ENST00000638952 CATSPER2Q96P56 530 aa17.88■□□□□ 0.45
HNRNPU-217ENST00000638952 SPAG6O75602 509 aa17.88■□□□□ 0.45
HNRNPU-217ENST00000638952 HSD17B4P51659 736 aa17.88■□□□□ 0.45
HNRNPU-217ENST00000638952 SNRPFP62306 86 aaKnown RBP17.88■□□□□ 0.45
HNRNPU-217ENST00000638952 DCAF4L1Q3SXM0 396 aa17.88■□□□□ 0.45
HNRNPU-217ENST00000638952 ZNF513Q8N8E2 541 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms