RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 MAGED2Q9UNF1 606 aaPredicted RBP13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 AGAP1Q9UPQ3 857 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 SLC8A2Q9UPR5 921 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 SMC3Q9UQE7 1217 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 CHD6Q8TD26 2715 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 KIF26AQ9ULI4 1882 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 ZZEF1O43149 2961 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 GABRDO14764 452 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 HCRTO43612 131 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 CCDC192P0DO97 292 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 PMLP29590 882 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 FAM160A1Q05DH4 1040 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 USP4Q13107 963 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 ST3GAL2Q16842 350 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 PLK5Q496M5 336 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 CC2D1AQ6P1N0 951 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 TMEM86AQ8N2M4 240 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 C12orf50Q8NA57 414 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 OSCP1Q8WVF1 389 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 ACCSQ96QU6 501 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 HHIPQ96QV1 700 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 CYP2S1Q96SQ9 504 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 P2RY13Q9BPV8 354 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 FGFBP2Q9BYJ0 223 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 SMOC1Q9H4F8 434 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 ECT2Q9H8V3 914 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 MRPL44Q9H9J2 332 aaKnown RBP13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 GDAP2Q9NXN4 497 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 RBAKQ9NYW8 714 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 GCNT4Q9P109 453 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 STK17AQ9UEE5 414 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 SIX4Q9UIU6 781 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 FBXO2Q9UK22 296 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 GTF3C4Q9UKN8 822 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 PCDHGA5Q9Y5G8 931 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 CLIC4Q9Y696 253 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 SCN1AP35498 2009 aa13.04□□□□□ -0.32
CACNA1A-250ENST00000637809 GAP43P17677 238 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 MPLP40238 635 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 RPL10AP62906 217 aaKnown RBP13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 AMPD2Q01433 879 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 EML3Q32P44 896 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 CFAP221Q4G0U5 840 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 FBXO43Q4G163 708 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 N4BP2L1Q5TBK1 243 aaPredicted RBP13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 STPG1Q5TH74 334 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 IL31Q6EBC2 164 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 SYT13Q7L8C5 426 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 LIMS2Q7Z4I7 341 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 CPA6Q8N4T0 437 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 CSGALNACT2Q8N6G5 542 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 TOP6BLQ8N6T0 577 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 RPLP0P6Q8NHW5 317 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 SPATA18Q8TC71 538 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 CBWD1Q9BRT8 395 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 DUSP15Q9H1R2 295 aaPredicted RBP13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 TMEM206Q9H813 350 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 OLFML3Q9NRN5 406 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 TBC1D7Q9P0N9 293 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 UXTQ9UBK9 157 aaPredicted RBP13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 EBF1Q9UH73 591 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 ITGA11Q9UKX5 1188 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 EXOC7Q9UPT5 735 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 WNT6Q9Y6F9 365 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 CNOT1A5YKK6 2376 aaKnown RBP13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 MYH11P35749 1972 aa13.03□□□□□ -0.32
CACNA1A-250ENST00000637809 SPEGQ15772 3267 aa13.02□□□□□ -0.32
CACNA1A-250ENST00000637809 FRMD3A2A2Y4 597 aa13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 GOLGA8IPA6NC78 632 aa13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 GOLGA8JA6NMD2 632 aa13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 HUS1O60921 280 aa13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 GARTP22102 1010 aa13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 ZXDBP98169 803 aa13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 MYL7Q01449 175 aa13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 SOWAHAQ2M3V2 549 aa13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 TCEAL6Q6IPX3 200 aa13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 FAM171BQ6P995 826 aa13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 ADGRF2Q8IZF7 708 aa13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 CACTINQ8WUQ7 758 aaKnown RBP13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 TCEAL3Q969E4 200 aa13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 FUBP3Q96I24 572 aaKnown RBP eCLIP13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 CLIC6Q96NY7 704 aa13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 MTMR12Q9C0I1 747 aa13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 PDE11AQ9HCR9 933 aa13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 TRPC7Q9HCX4 862 aa13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 DUS2Q9NX74 493 aaKnown RBP13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 SRPRBQ9Y5M8 271 aaKnown RBP13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 SNX9Q9Y5X1 595 aa13.02□□□□□ -0.33
CACNA1A-250ENST00000637809 TRAV19A0A0A6YYK7 116 aa13.01□□□□□ -0.33
CACNA1A-250ENST00000637809 C2orf78A6NCI8 922 aa13.01□□□□□ -0.33
CACNA1A-250ENST00000637809 DCLK1O15075 740 aa13.01□□□□□ -0.33
CACNA1A-250ENST00000637809 ATP2C2O75185 946 aa13.01□□□□□ -0.33
CACNA1A-250ENST00000637809 GCNT3O95395 438 aa13.01□□□□□ -0.33
CACNA1A-250ENST00000637809 APBB3O95704 486 aa13.01□□□□□ -0.33
CACNA1A-250ENST00000637809 LDHAP00338 332 aaKnown RBP13.01□□□□□ -0.33
CACNA1A-250ENST00000637809 CKMP06732 381 aa13.01□□□□□ -0.33
CACNA1A-250ENST00000637809 USP17L7P0C7H9 530 aa13.01□□□□□ -0.33
CACNA1A-250ENST00000637809 TCF3P15923 654 aa13.01□□□□□ -0.33
CACNA1A-250ENST00000637809 KCNA4P22459 653 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms