RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 FBXO4Q9UKT5 387 aa20.28■□□□□ 0.84
CLN6-213ENST00000636212 PIEZO1Q92508 2521 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 A0A1W2PQ27 194 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 A0A1W2PQ64 194 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 A0A1W2PQD8 194 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 MYBPHLA2RUH7 354 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 SLC38A8A6NNN8 435 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 PDXKO00764 312 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 CALUO43852 315 aaPredicted RBP20.27■□□□□ 0.84
CLN6-213ENST00000636212 CST3P01034 146 aaPredicted RBP20.27■□□□□ 0.84
CLN6-213ENST00000636212 F11P03951 625 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 HMGA1P17096 107 aaKnown RBP20.27■□□□□ 0.84
CLN6-213ENST00000636212 GNL1P36915 607 aaPredicted RBP20.27■□□□□ 0.84
CLN6-213ENST00000636212 GPR15P49685 360 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 PSMC1P62191 440 aaKnown RBP20.27■□□□□ 0.84
CLN6-213ENST00000636212 CYP27A1Q02318 531 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 PPP2R5DQ14738 602 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 FAM171BQ6P995 826 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 VSTM1Q6UX27 236 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 ASCL5Q7RTU5 278 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 LIMS2Q7Z4I7 341 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 MAB21L3Q8N8X9 362 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 KIAA0895Q8NCT3 520 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 KBTBD7Q8WVZ9 684 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 RSPRY1Q96DX4 576 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 TRMT2BQ96GJ1 504 aaKnown RBP20.27■□□□□ 0.84
CLN6-213ENST00000636212 PKMYT1Q99640 499 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 IER2Q9BTL4 223 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 SLC46A2Q9BY10 475 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 KIF9Q9HAQ2 790 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 EHD2Q9NZN4 543 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 FRMD4BQ9Y2L6 1034 aa20.27■□□□□ 0.84
CLN6-213ENST00000636212 NUP210Q8TEM1 1887 aaPredicted RBP20.26■□□□□ 0.83
CLN6-213ENST00000636212 TACC1O75410 805 aa20.26■□□□□ 0.83
CLN6-213ENST00000636212 NOL4O94818 638 aa20.26■□□□□ 0.83
CLN6-213ENST00000636212 STAU1O95793 577 aaKnown RBP20.26■□□□□ 0.83
CLN6-213ENST00000636212 CCNE1P24864 410 aa20.26■□□□□ 0.83
CLN6-213ENST00000636212 LMO2P25791 158 aa20.26■□□□□ 0.83
CLN6-213ENST00000636212 GRIK1P39086 918 aa20.26■□□□□ 0.83
CLN6-213ENST00000636212 NDUFA8P51970 172 aa20.26■□□□□ 0.83
CLN6-213ENST00000636212 CSTF1Q05048 431 aaKnown RBP20.26■□□□□ 0.83
CLN6-213ENST00000636212 LRRC32Q14392 662 aa20.26■□□□□ 0.83
CLN6-213ENST00000636212 ZNF528Q3MIS6 628 aa20.26■□□□□ 0.83
CLN6-213ENST00000636212 SDHAF4Q5VUM1 108 aa20.26■□□□□ 0.83
CLN6-213ENST00000636212 SLC9A9Q8IVB4 645 aa20.26■□□□□ 0.83
CLN6-213ENST00000636212 CEP295NLQ96MC4 621 aa20.26■□□□□ 0.83
CLN6-213ENST00000636212 NXF1Q9UBU9 619 aaKnown RBP20.26■□□□□ 0.83
CLN6-213ENST00000636212 R4GN57 208 aa20.26■□□□□ 0.83
CLN6-213ENST00000636212 NCANO14594 1321 aa20.26■□□□□ 0.83
CLN6-213ENST00000636212 COL4A3Q01955 1670 aa20.26■□□□□ 0.83
CLN6-213ENST00000636212 TICRRQ7Z2Z1 1910 aa20.25■□□□□ 0.83
CLN6-213ENST00000636212 FAM237AA0A1B0GTK4 181 aa20.25■□□□□ 0.83
CLN6-213ENST00000636212 GOLGA6L4A6NEF3 574 aa20.25■□□□□ 0.83
CLN6-213ENST00000636212 TRIM66O15016 1216 aa20.25■□□□□ 0.83
CLN6-213ENST00000636212 HCRTO43612 131 aa20.25■□□□□ 0.83
CLN6-213ENST00000636212 ATP2C2O75185 946 aa20.25■□□□□ 0.83
CLN6-213ENST00000636212 PRAMEF12O95522 483 aa20.25■□□□□ 0.83
CLN6-213ENST00000636212 LMNAP02545 664 aaKnown RBP20.25■□□□□ 0.83
CLN6-213ENST00000636212 MYL6P60660 151 aa20.25■□□□□ 0.83
CLN6-213ENST00000636212 CC2D1AQ6P1N0 951 aaPredicted RBP20.25■□□□□ 0.83
CLN6-213ENST00000636212 MON1AQ86VX9 555 aa20.25■□□□□ 0.83
CLN6-213ENST00000636212 RALGPS2Q86X27 583 aaPredicted RBP20.25■□□□□ 0.83
CLN6-213ENST00000636212 MYCBPAPQ8TBZ2 947 aa20.25■□□□□ 0.83
CLN6-213ENST00000636212 MYLPFQ96A32 169 aa20.25■□□□□ 0.83
CLN6-213ENST00000636212 MYRFLQ96LU7 910 aa20.25■□□□□ 0.83
CLN6-213ENST00000636212 LMAN1LQ9HAT1 526 aa20.25■□□□□ 0.83
CLN6-213ENST00000636212 TDP1Q9NUW8 608 aa20.25■□□□□ 0.83
CLN6-213ENST00000636212 A8MXQ7 604 aa20.24■□□□□ 0.83
CLN6-213ENST00000636212 ARNTLO00327 626 aa20.24■□□□□ 0.83
CLN6-213ENST00000636212 KINO60870 393 aaKnown RBP20.24■□□□□ 0.83
CLN6-213ENST00000636212 NR3C1P04150 777 aa20.24■□□□□ 0.83
CLN6-213ENST00000636212 P4HA1P13674 534 aa20.24■□□□□ 0.83
CLN6-213ENST00000636212 BDNFP23560 247 aa20.24■□□□□ 0.83
CLN6-213ENST00000636212 CASP4P49662 377 aa20.24■□□□□ 0.83
CLN6-213ENST00000636212 PDE6CP51160 858 aa20.24■□□□□ 0.83
CLN6-213ENST00000636212 ZNF699Q32M78 642 aa20.24■□□□□ 0.83
CLN6-213ENST00000636212 ZNF667Q5HYK9 610 aa20.24■□□□□ 0.83
CLN6-213ENST00000636212 MDH1BQ5I0G3 518 aa20.24■□□□□ 0.83
CLN6-213ENST00000636212 CEP135Q66GS9 1140 aa20.24■□□□□ 0.83
CLN6-213ENST00000636212 TXNDC8Q6A555 127 aa20.24■□□□□ 0.83
CLN6-213ENST00000636212 KRBA2Q6ZNG9 492 aa20.24■□□□□ 0.83
CLN6-213ENST00000636212 STKLD1Q8NE28 680 aa20.24■□□□□ 0.83
CLN6-213ENST00000636212 PARD3BQ8TEW8 1205 aa20.24■□□□□ 0.83
CLN6-213ENST00000636212 TMEM174Q8WUU8 243 aa20.24■□□□□ 0.83
CLN6-213ENST00000636212 ZNF516Q92618 1163 aa20.24■□□□□ 0.83
CLN6-213ENST00000636212 CHAMP1Q96JM3 812 aa20.24■□□□□ 0.83
CLN6-213ENST00000636212 MRPL45Q9BRJ2 306 aaKnown RBP20.24■□□□□ 0.83
CLN6-213ENST00000636212 SMG9Q9H0W8 520 aaKnown RBP20.24■□□□□ 0.83
CLN6-213ENST00000636212 KCTD10Q9H3F6 313 aa20.24■□□□□ 0.83
CLN6-213ENST00000636212 TRPC7Q9HCX4 862 aa20.24■□□□□ 0.83
CLN6-213ENST00000636212 DMAC2Q9NW81 257 aa20.24■□□□□ 0.83
CLN6-213ENST00000636212 LRRIQ3A6PVS8 624 aaPredicted RBP20.23■□□□□ 0.83
CLN6-213ENST00000636212 SPECC1L-ADORA2AF8WAN1 911 aa20.23■□□□□ 0.83
CLN6-213ENST00000636212 RHOBTB3O94955 611 aa20.23■□□□□ 0.83
CLN6-213ENST00000636212 USP17L7P0C7H9 530 aa20.23■□□□□ 0.83
CLN6-213ENST00000636212 TRIM21P19474 475 aaKnown RBP20.23■□□□□ 0.83
CLN6-213ENST00000636212 ITPRIPL2Q3MIP1 535 aa20.23■□□□□ 0.83
CLN6-213ENST00000636212 TMEM150AQ86TG1 271 aa20.23■□□□□ 0.83
CLN6-213ENST00000636212 ADSSL1Q8N142 457 aa20.23■□□□□ 0.83
CLN6-213ENST00000636212 TTC8Q8TAM2 541 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms