RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	SNX9	Q9Y5X1	595 aa		7.86	□□□□□ -1.15
CACNA1A-222	ENST00000636022	SPAG17	Q6Q759	2223 aa		7.86	□□□□□ -1.15
CACNA1A-222	ENST00000636022	SPECC1L-ADORA2A	F8WAN1	911 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	DPYSL4	O14531	572 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	POLR2D	O15514	142 aa	Known RBP	7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	ATMIN	O43313	823 aa	Predicted RBP	7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	PRPF40A	O75400	957 aa	Known RBP	7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	TADA3	O75528	432 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	PAPSS2	O95340	614 aa	Predicted RBP	7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	F13A1	P00488	732 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	KRT19	P08727	400 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	TMEM191B	P0C7N4	346 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	CSH1	P0DML2	217 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	CSH2	P0DML3	217 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	PDIA4	P13667	645 aa	Known RBP	7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	LMO2	P25791	158 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	DDX6	P26196	483 aa	Known RBP eCLIP	7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	CASP1	P29466	404 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	CTH	P32929	405 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	ID4	P47928	161 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	LHX1	P48742	406 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	KPNA1	P52294	538 aa	Predicted RBP	7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	ASIC1	P78348	528 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	PLCB2	Q00722	1185 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	AMPD3	Q01432	767 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	MYL7	Q01449	175 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	TNK2	Q07912	1038 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	MYO1E	Q12965	1108 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	CCIN	Q13939	588 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	SURF1	Q15526	300 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	SNRNP35	Q16560	246 aa	Known RBP	7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	BMT2	Q1RMZ1	405 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	FAM26F	Q5R3K3	315 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	SDHAF4	Q5VUM1	108 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	RESP18	Q5W5W9	173 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	TXNDC8	Q6A555	127 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	UNC13D	Q70J99	1090 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	DPH6	Q7L8W6	267 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	MON1A	Q86VX9	555 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	RALGPS2	Q86X27	583 aa	Predicted RBP	7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	WDR49	Q8IV35	697 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	KIAA2013	Q8IYS2	634 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	ADGRF2	Q8IZF7	708 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	CMTM8	Q8IZV2	173 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	SPEM1	Q8N4L4	309 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	CELF5	Q8N6W0	485 aa	Known RBP	7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	STKLD1	Q8NE28	680 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	TTC8	Q8TAM2	541 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	RIN3	Q8TB24	985 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	CSGALNACT1	Q8TDX6	532 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	NOC3L	Q8WTT2	800 aa	Known RBP	7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	USP13	Q92995	863 aa	Predicted RBP	7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	CHFR	Q96EP1	664 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	TRMT2B	Q96GJ1	504 aa	Known RBP	7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	FUBP3	Q96I24	572 aa	Known RBP eCLIP	7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	HPDL	Q96IR7	371 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	ANKRD36BP1	Q96IX9	119 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	MYRFL	Q96LU7	910 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	GCNA	Q96QF7	691 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	MAGEF1	Q9HAY2	307 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	KIAA1586	Q9HCI6	787 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	RBM12	Q9NTZ6	932 aa	Known RBP	7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	TDP1	Q9NUW8	608 aa		7.85	□□□□□ -1.15
CACNA1A-222	ENST00000636022	UBE4B	O95155	1302 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	PVALEF	A0A1B0GWK0	134 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	OTOL1	A6NHN0	477 aa	Predicted RBP	7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022		K7ESF4	209 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	TULP1	O00294	542 aa	Predicted RBP	7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	KLRC4	O43908	158 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	ATP2C2	O75185	946 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	CST3	P01034	146 aa	Predicted RBP	7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	TNNC2	P02585	160 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	WARS	P23381	471 aa	Known RBP	7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	PCSK1	P29120	753 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	AVPR1A	P37288	418 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	MAGEA11	P43364	429 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	CXCL12	P48061	93 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	CCR3	P51677	355 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	NRL	P54845	237 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	SNRPF	P62306	86 aa	Known RBP	7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	RPL10A	P62906	217 aa	Known RBP	7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	FOXK2	Q01167	660 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	SATB1	Q01826	763 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	CYP24A1	Q07973	514 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	CUL4B	Q13620	913 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	ZNF268	Q14587	947 aa	Predicted RBP	7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	PSMD6	Q15008	389 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	TAF12	Q16514	161 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	ITPRIPL2	Q3MIP1	535 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	DGKK	Q5KSL6	1271 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	ATL3	Q6DD88	541 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	FOXD4L3	Q6VB84	417 aa	Predicted RBP	7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022		Q6ZS52	159 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	TRAPPC11	Q7Z392	1133 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	C12orf56	Q8IXR9	622 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	MAB21L3	Q8N8X9	362 aa		7.84	□□□□□ -1.15
CACNA1A-222	ENST00000636022	RDH13	Q8NBN7	331 aa		7.84	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms