RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 LEKR1Q6ZMV7 388 aa21.13■□□□□ 0.97
CLN8-208ENST00000635751 COLGALT2Q8IYK4 626 aa21.13■□□□□ 0.97
CLN8-208ENST00000635751 ZNF560Q96MR9 790 aa21.13■□□□□ 0.97
CLN8-208ENST00000635751 AP1M1Q9BXS5 423 aa21.13■□□□□ 0.97
CLN8-208ENST00000635751 SLITRK6Q9H5Y7 841 aa21.13■□□□□ 0.97
CLN8-208ENST00000635751 NRDE2Q9H7Z3 1164 aa21.13■□□□□ 0.97
CLN8-208ENST00000635751 DDX3YO15523 660 aaKnown RBP21.13■□□□□ 0.97
CLN8-208ENST00000635751 RTN2O75298 545 aa21.13■□□□□ 0.97
CLN8-208ENST00000635751 TBXAS1P24557 533 aaPredicted RBP21.13■□□□□ 0.97
CLN8-208ENST00000635751 USP8P40818 1118 aa21.13■□□□□ 0.97
CLN8-208ENST00000635751 PNPLA4P41247 253 aa21.13■□□□□ 0.97
CLN8-208ENST00000635751 ASPAP45381 313 aa21.13■□□□□ 0.97
CLN8-208ENST00000635751 LILRA4P59901 499 aa21.13■□□□□ 0.97
CLN8-208ENST00000635751 C3orf58Q8NDZ4 430 aa21.13■□□□□ 0.97
CLN8-208ENST00000635751 DDX27Q96GQ7 796 aaKnown RBP21.13■□□□□ 0.97
CLN8-208ENST00000635751 FAM81BQ96LP2 452 aa21.13■□□□□ 0.97
CLN8-208ENST00000635751 UROC1Q96N76 676 aa21.13■□□□□ 0.97
CLN8-208ENST00000635751 MRPL9Q9BYD2 267 aaKnown RBP21.13■□□□□ 0.97
CLN8-208ENST00000635751 PLEKHA4Q9H4M7 779 aa21.13■□□□□ 0.97
CLN8-208ENST00000635751 SNX9Q9Y5X1 595 aa21.13■□□□□ 0.97
CLN8-208ENST00000635751 GOLGA6CA6NDK9 693 aa21.12■□□□□ 0.97
CLN8-208ENST00000635751 KPNA7A9QM74 516 aa21.12■□□□□ 0.97
CLN8-208ENST00000635751 SART1O43290 800 aaKnown RBP21.12■□□□□ 0.97
CLN8-208ENST00000635751 FTLP02792 175 aaPredicted RBP21.12■□□□□ 0.97
CLN8-208ENST00000635751 WEE2P0C1S8 567 aa21.12■□□□□ 0.97
CLN8-208ENST00000635751 GOLGA6DP0CG33 693 aa21.12■□□□□ 0.97
CLN8-208ENST00000635751 OR1G1P47890 313 aa21.12■□□□□ 0.97
CLN8-208ENST00000635751 CLUL1Q15846 466 aa21.12■□□□□ 0.97
CLN8-208ENST00000635751 SV2CQ496J9 727 aa21.12■□□□□ 0.97
CLN8-208ENST00000635751 C11orf63Q6NUN7 778 aa21.12■□□□□ 0.97
CLN8-208ENST00000635751 ENOSF1Q7L5Y1 443 aa21.12■□□□□ 0.97
CLN8-208ENST00000635751 FAM76AQ8TAV0 307 aa21.12■□□□□ 0.97
CLN8-208ENST00000635751 EPS8L1Q8TE68 723 aa21.12■□□□□ 0.97
CLN8-208ENST00000635751 HERVK_113Q902F9 699 aa21.12■□□□□ 0.97
CLN8-208ENST00000635751 SHC3Q92529 594 aa21.12■□□□□ 0.97
CLN8-208ENST00000635751 ZNF689Q96CS4 500 aaPredicted RBP21.12■□□□□ 0.97
CLN8-208ENST00000635751 GOLGA6AQ9NYA3 693 aa21.12■□□□□ 0.97
CLN8-208ENST00000635751 NOCTQ9UK39 431 aaKnown RBP21.12■□□□□ 0.97
CLN8-208ENST00000635751 COG5Q9UP83 839 aa21.12■□□□□ 0.97
CLN8-208ENST00000635751 BHMG1C9JSJ3 638 aaPredicted RBP21.11■□□□□ 0.97
CLN8-208ENST00000635751 B3GAT3O94766 335 aa21.11■□□□□ 0.97
CLN8-208ENST00000635751 FAM153BP0C7A2 387 aa21.11■□□□□ 0.97
CLN8-208ENST00000635751 GZMAP12544 262 aa21.11■□□□□ 0.97
CLN8-208ENST00000635751 RAP1GAPP47736 663 aa21.11■□□□□ 0.97
CLN8-208ENST00000635751 CDH8P55286 799 aa21.11■□□□□ 0.97
CLN8-208ENST00000635751 GPC5P78333 572 aa21.11■□□□□ 0.97
CLN8-208ENST00000635751 FAM153CQ494X1 144 aa21.11■□□□□ 0.97
CLN8-208ENST00000635751 RSPH1Q8WYR4 309 aa21.11■□□□□ 0.97
CLN8-208ENST00000635751 NAP1L3Q99457 506 aaPredicted RBP21.11■□□□□ 0.97
CLN8-208ENST00000635751 CARD9Q9H257 536 aa21.11■□□□□ 0.97
CLN8-208ENST00000635751 FAM153AQ9UHL3 310 aa21.11■□□□□ 0.97
CLN8-208ENST00000635751 LAMA2P24043 3122 aaKnown RBP21.11■□□□□ 0.97
CLN8-208ENST00000635751 F8W810 466 aa21.11■□□□□ 0.97
CLN8-208ENST00000635751 P4HA1P13674 534 aa21.11■□□□□ 0.97
CLN8-208ENST00000635751 HNRNPH2P55795 449 aaKnown RBP21.11■□□□□ 0.97
CLN8-208ENST00000635751 ZSCAN26Q16670 478 aa21.11■□□□□ 0.97
CLN8-208ENST00000635751 DCLRE1AQ6PJP8 1040 aa21.11■□□□□ 0.97
CLN8-208ENST00000635751 LRRC43Q8N309 656 aa21.11■□□□□ 0.97
CLN8-208ENST00000635751 CCDC26Q8TAB7 109 aa21.11■□□□□ 0.97
CLN8-208ENST00000635751 HASPINQ8TF76 798 aa21.11■□□□□ 0.97
CLN8-208ENST00000635751 BCO2Q9BYV7 579 aa21.11■□□□□ 0.97
CLN8-208ENST00000635751 DDX47Q9H0S4 455 aaKnown RBP21.11■□□□□ 0.97
CLN8-208ENST00000635751 SDCBP2Q9H190 292 aa21.11■□□□□ 0.97
CLN8-208ENST00000635751 SMYD3Q9H7B4 428 aa21.11■□□□□ 0.97
CLN8-208ENST00000635751 CTTNBP2NLQ9P2B4 639 aa21.11■□□□□ 0.97
CLN8-208ENST00000635751 KIAA1671Q9BY89 1806 aa21.1■□□□□ 0.97
CLN8-208ENST00000635751 CHRNB2P17787 502 aa21.1■□□□□ 0.97
CLN8-208ENST00000635751 CD58P19256 250 aa21.1■□□□□ 0.97
CLN8-208ENST00000635751 MAGEA10P43363 369 aaPredicted RBP21.1■□□□□ 0.97
CLN8-208ENST00000635751 CFAP58Q5T655 872 aa21.1■□□□□ 0.97
CLN8-208ENST00000635751 CD300LGQ6UXG3 332 aa21.1■□□□□ 0.97
CLN8-208ENST00000635751 MAATS1Q7Z4T9 603 aa21.1■□□□□ 0.97
CLN8-208ENST00000635751 NOP9Q86U38 636 aaKnown RBP21.1■□□□□ 0.97
CLN8-208ENST00000635751 FAXDC2Q96IV6 333 aa21.1■□□□□ 0.97
CLN8-208ENST00000635751 ZIM3Q96PE6 472 aa21.1■□□□□ 0.97
CLN8-208ENST00000635751 RC3H2Q9HBD1 1191 aaKnown RBP21.1■□□□□ 0.97
CLN8-208ENST00000635751 GDAP2Q9NXN4 497 aa21.1■□□□□ 0.97
CLN8-208ENST00000635751 SLC4A7Q9Y6M7 1214 aa21.1■□□□□ 0.97
CLN8-208ENST00000635751 MIF4GDA9UHW6 222 aaKnown RBP21.09■□□□□ 0.97
CLN8-208ENST00000635751 CYP26A1O43174 497 aa21.09■□□□□ 0.97
CLN8-208ENST00000635751 FGGP02679 453 aa21.09■□□□□ 0.97
CLN8-208ENST00000635751 ITGB1P05556 798 aa21.09■□□□□ 0.97
CLN8-208ENST00000635751 ACO1P21399 889 aaKnown RBP21.09■□□□□ 0.97
CLN8-208ENST00000635751 DCAF12L1Q5VU92 463 aa21.09■□□□□ 0.97
CLN8-208ENST00000635751 PCDHB18PQ96TA0 734 aa21.09■□□□□ 0.97
CLN8-208ENST00000635751 CISHQ9NSE2 258 aa21.09■□□□□ 0.97
CLN8-208ENST00000635751 PRG3Q9Y2Y8 225 aaPredicted RBP21.09■□□□□ 0.97
CLN8-208ENST00000635751 PCDHB4Q9Y5E5 795 aa21.09■□□□□ 0.97
CLN8-208ENST00000635751 NRP1O14786 923 aa21.08■□□□□ 0.97
CLN8-208ENST00000635751 GJB5O95377 273 aa21.08■□□□□ 0.97
CLN8-208ENST00000635751 ALDH2P05091 517 aa21.08■□□□□ 0.97
CLN8-208ENST00000635751 HLTFQ14527 1009 aaKnown RBP eCLIP21.08■□□□□ 0.97
CLN8-208ENST00000635751 TRADDQ15628 312 aa21.08■□□□□ 0.97
CLN8-208ENST00000635751 PPP2R5EQ16537 467 aa21.08■□□□□ 0.97
CLN8-208ENST00000635751 IQCKQ8N0W5 287 aa21.08■□□□□ 0.97
CLN8-208ENST00000635751 UBR7Q8N806 425 aa21.08■□□□□ 0.97
CLN8-208ENST00000635751 SENP8Q96LD8 212 aa21.08■□□□□ 0.97
CLN8-208ENST00000635751 RNPC3Q96LT9 517 aaKnown RBP21.08■□□□□ 0.97
CLN8-208ENST00000635751 YME1L1Q96TA2 773 aa21.08■□□□□ 0.97
CLN8-208ENST00000635751 CWH43Q9H720 699 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms