RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 TSPAN1O60635 241 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 PYGMP11217 842 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 GNAT1P11488 350 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 MMP8P22894 467 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 CDH5P33151 784 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-230ENST00000634433 GRM5P41594 1212 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 FNTAP49354 379 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 MAMLD1Q13495 774 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 TMEM95Q3KNT9 176 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 MARCH8Q5T0T0 291 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 JADE1Q6IE81 842 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 CCSAPQ6IQ19 270 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-230ENST00000634433 FBXO46Q6PJ61 603 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-230ENST00000634433 ERICH1Q86X53 443 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 RASAL3Q86YV0 1011 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 PASD1Q8IV76 773 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 RHOT1Q8IXI2 618 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 SOCS4Q8WXH5 440 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 TBC1D20Q96BZ9 403 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 CPB2Q96IY4 423 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 BTBD6Q96KE9 485 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 HINFPQ9BQA5 517 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 ERP44Q9BS26 406 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 BCO2Q9BYV7 579 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 MIS12Q9H081 205 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 ZFYVE28Q9HCC9 887 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 VPS18Q9P253 973 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 NXF1Q9UBU9 619 aaKnown RBP7.56□□□□□ -1.2
BRCA1-230ENST00000634433 CHORDC1Q9UHD1 332 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-230ENST00000634433 PCYOX1Q9UHG3 505 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 POLG2Q9UHN1 485 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 KIAA1257Q9ULG3 409 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 EVPLQ92817 2033 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 FSCN2O14926 492 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 TTI1O43156 1089 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 AGR2O95994 175 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 F2P00734 622 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 CALCAP01258 141 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 WEE2P0C1S8 567 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 GGCXP38435 758 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 HSPA9P38646 679 aaKnown RBP7.56□□□□□ -1.2
BRCA1-230ENST00000634433 ASPAP45381 313 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 MASP1P48740 699 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 YARSP54577 528 aaKnown RBP7.56□□□□□ -1.2
BRCA1-230ENST00000634433 CYP1B1Q16678 543 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 SLC10A6Q3KNW5 377 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 WDR72Q3MJ13 1102 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 ACBD5Q5T8D3 534 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-230ENST00000634433 DNAJC24Q6P3W2 148 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 MMS22LQ6ZRQ5 1243 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 SYDE1Q6ZW31 735 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-230ENST00000634433 CATSPER4Q7RTX7 472 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 C1orf127Q8N9H9 656 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 ZBTB10Q96DT7 871 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 GDAP1L1Q96MZ0 367 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 DNAI2Q9GZS0 605 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 ST7Q9NRC1 585 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 SETD4Q9NVD3 440 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 WDR35Q9P2L0 1181 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 FAM170AA1A519 330 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 TRIM64CA6NLI5 447 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 TLR3O15455 904 aaKnown RBP7.55□□□□□ -1.2
BRCA1-230ENST00000634433 KPNA6O60684 536 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 RNF40O75150 1001 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 SYF2O95926 243 aaKnown RBP7.55□□□□□ -1.2
BRCA1-230ENST00000634433 ITGB3P05106 788 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 NFICP08651 508 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 SMIM10L2AP0DMW4 78 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 SMIM10L2BP0DMW5 78 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 PSEN2P49810 448 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 MYO1EQ12965 1108 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 STILQ15468 1287 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 SPDYCQ5MJ68 293 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 NOTUMQ6P988 496 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 SLC27A1Q6PCB7 646 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 DCUN1D2Q6PH85 259 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 C17orf99Q6UX52 265 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 LRIG3Q6UXM1 1119 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 SCARA5Q6ZMJ2 495 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 TLK2Q86UE8 772 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 CDR2LQ86X02 465 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-230ENST00000634433 C12orf50Q8NA57 414 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-230ENST00000634433 FLCNQ8NFG4 579 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 GRK7Q8WTQ7 553 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 USP6NLQ92738 828 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 ARMC5Q96C12 935 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 HPDLQ96IR7 371 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 ADAMTS10Q9H324 1103 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 DPP3Q9NY33 737 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 SIX4Q9UIU6 781 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 ADAM21Q9UKJ8 722 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 KAT6AQ92794 2004 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 MBLAC1A4D2B0 266 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-230ENST00000634433 ZNF865P0CJ78 1059 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-230ENST00000634433 CYP2C9P11712 490 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 CD19P15391 556 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 COILP38432 576 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-230ENST00000634433 GUCY2FP51841 1108 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 DMTNQ08495 405 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 SREBF2Q12772 1141 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms