RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 ENDOD1O94919 500 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 GJB6O95452 261 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 TRUB2O95900 331 aaKnown RBP5.86□□□□□ -1.47
NEK3-211ENST00000629912 GAS8O95995 478 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 ERBB2P04626 1255 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 NUDT17P0C025 328 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 GOLGA6DP0CG33 693 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 WARSP23381 471 aaKnown RBP5.86□□□□□ -1.47
NEK3-211ENST00000629912 KDELR1P24390 212 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 PSMA2P25787 234 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 LRPAP1P30533 357 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 GNL1P36915 607 aaPredicted RBP5.86□□□□□ -1.47
NEK3-211ENST00000629912 SCNN1AP37088 669 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 CDKN2BP42772 138 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 PSMC4P43686 418 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 ZNF143P52747 638 aaPredicted RBP5.86□□□□□ -1.47
NEK3-211ENST00000629912 PMS2P54278 862 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 GYS2P54840 703 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 PLTPP55058 493 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 IRX5P78411 483 aaPredicted RBP5.86□□□□□ -1.47
NEK3-211ENST00000629912 MRPS6P82932 125 aaKnown RBP5.86□□□□□ -1.47
NEK3-211ENST00000629912 PDCLQ13371 301 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 SOWAHAQ2M3V2 549 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 NBPF20Q3BBV1 942 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 ATP13A4Q4VNC1 1196 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 TTMPQ5BVD1 217 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 GNASQ5JWF2 1037 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 CYP4A22Q5TCH4 519 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 AGBL2Q5U5Z8 902 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 MFSD7Q6UXD7 560 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 TRMT10CQ7L0Y3 403 aaKnown RBP5.86□□□□□ -1.47
NEK3-211ENST00000629912 ANKS1BQ7Z6G8 1248 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 MRPL10Q7Z7H8 261 aaKnown RBP5.86□□□□□ -1.47
NEK3-211ENST00000629912 RSPH3Q86UC2 560 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 ZDHHC17Q8IUH5 632 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 RELL1Q8IUW5 271 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 TMEM130Q8N3G9 435 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 TOP6BLQ8N6T0 577 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 ARFGAP1Q8N6T3 406 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 ANKRD52Q8NB46 1076 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 TTC13Q8NBP0 860 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 SMG8Q8ND04 991 aaKnown RBP5.86□□□□□ -1.47
NEK3-211ENST00000629912 KLHDC9Q8NEP7 349 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 JOSD2Q8TAC2 188 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 FAM76AQ8TAV0 307 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 UBA3Q8TBC4 463 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 FBXO25Q8TCJ0 367 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 CCHCR1Q8TD31 782 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 SLC35F5Q8WV83 523 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 TMEM40Q8WWA1 233 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 C1orf54Q8WWF1 131 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 RAPGEF5Q92565 580 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 KHSRPQ92945 711 aaKnown RBP eCLIP5.86□□□□□ -1.473e-8■□□□□ 11
NEK3-211ENST00000629912 NKD2Q969F2 451 aaPredicted RBP5.86□□□□□ -1.47
NEK3-211ENST00000629912 C18orf25Q96B23 403 aaPredicted RBP5.86□□□□□ -1.47
NEK3-211ENST00000629912 RNF25Q96BH1 459 aaPredicted RBP5.86□□□□□ -1.47
NEK3-211ENST00000629912 SNF8Q96H20 258 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 ATP6V1G3Q96LB4 118 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 ZNF560Q96MR9 790 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 MRPL45Q9BRJ2 306 aaKnown RBP5.86□□□□□ -1.47
NEK3-211ENST00000629912 CNPY3Q9BT09 278 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 ROPN1BQ9BZX4 212 aaPredicted RBP5.86□□□□□ -1.47
NEK3-211ENST00000629912 TRIM31Q9BZY9 425 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 TRIM6Q9C030 488 aaPredicted RBP5.86□□□□□ -1.47
NEK3-211ENST00000629912 CXCL16Q9H2A7 254 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 PABPC3Q9H361 631 aaKnown RBP5.86□□□□□ -1.47
NEK3-211ENST00000629912 ROPN1Q9HAT0 212 aaPredicted RBP5.86□□□□□ -1.47
NEK3-211ENST00000629912 SPC25Q9HBM1 224 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 PRDM10Q9NQV6 1147 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 CHST7Q9NS84 486 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 ASNSD1Q9NWL6 643 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 GOLGA6AQ9NYA3 693 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 HMGXB4Q9UGU5 601 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 PIN4Q9Y237 131 aaKnown RBP5.86□□□□□ -1.47
NEK3-211ENST00000629912 IPPQ9Y573 584 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 TRPV2Q9Y5S1 764 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 SNX9Q9Y5X1 595 aa5.86□□□□□ -1.47
NEK3-211ENST00000629912 hCG_1818297A0A087WSY0 165 aa5.85□□□□□ -1.47
NEK3-211ENST00000629912 MYADML2A6NDP7 307 aa5.85□□□□□ -1.47
NEK3-211ENST00000629912 GOLGA6L10A6NI86 522 aa5.85□□□□□ -1.47
NEK3-211ENST00000629912 C2CD4BA6NLJ0 364 aa5.85□□□□□ -1.47
NEK3-211ENST00000629912 SRRM3A6NNA2 597 aaPredicted RBP5.85□□□□□ -1.47
NEK3-211ENST00000629912 GOLGA8SH3BPF8 625 aa5.85□□□□□ -1.47
NEK3-211ENST00000629912 M0QYV0 167 aa5.85□□□□□ -1.47
NEK3-211ENST00000629912 M0QZ92 97 aa5.85□□□□□ -1.47
NEK3-211ENST00000629912 DPYSL4O14531 572 aa5.85□□□□□ -1.47
NEK3-211ENST00000629912 PPEF2O14830 753 aa5.85□□□□□ -1.47
NEK3-211ENST00000629912 TP73O15350 636 aa5.85□□□□□ -1.47
NEK3-211ENST00000629912 LIASO43766 372 aa5.85□□□□□ -1.47
NEK3-211ENST00000629912 ZNF623O75123 536 aa5.85□□□□□ -1.47
NEK3-211ENST00000629912 ADAMTS4O75173 837 aa5.85□□□□□ -1.47
NEK3-211ENST00000629912 LRCH4O75427 683 aa5.85□□□□□ -1.47
NEK3-211ENST00000629912 RNF8O76064 485 aa5.85□□□□□ -1.47
NEK3-211ENST00000629912 KRT14P02533 472 aa5.85□□□□□ -1.47
NEK3-211ENST00000629912 ITGAVP06756 1048 aa5.85□□□□□ -1.47
NEK3-211ENST00000629912 C6orf222P0C671 652 aaPredicted RBP5.85□□□□□ -1.47
NEK3-211ENST00000629912 MYZAPP0CAP1 466 aa5.85□□□□□ -1.47
NEK3-211ENST00000629912 TCF4P15884 667 aa5.85□□□□□ -1.47
NEK3-211ENST00000629912 GPD1P21695 349 aa5.85□□□□□ -1.47
NEK3-211ENST00000629912 PAX3P23760 479 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms