RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 CEP135Q66GS9 1140 aa13.97□□□□□ -0.17
ATRX-208ENST00000622960 CC2D1AQ6P1N0 951 aaPredicted RBP13.97□□□□□ -0.17
ATRX-208ENST00000622960 VSTM1Q6UX27 236 aa13.97□□□□□ -0.17
ATRX-208ENST00000622960 KIAA0895Q8NCT3 520 aa13.97□□□□□ -0.17
ATRX-208ENST00000622960 EXOC4Q96A65 974 aa13.97□□□□□ -0.17
ATRX-208ENST00000622960 TRMT2BQ96GJ1 504 aaKnown RBP13.97□□□□□ -0.17
ATRX-208ENST00000622960 CEP295NLQ96MC4 621 aa13.97□□□□□ -0.17
ATRX-208ENST00000622960 IMPG2Q9BZV3 1241 aa13.97□□□□□ -0.17
ATRX-208ENST00000622960 DNAI2Q9GZS0 605 aa13.97□□□□□ -0.17
ATRX-208ENST00000622960 C8orf33Q9H7E9 229 aaPredicted RBP13.97□□□□□ -0.17
ATRX-208ENST00000622960 TMLHEQ9NVH6 421 aa13.97□□□□□ -0.17
ATRX-208ENST00000622960 NXF1Q9UBU9 619 aaKnown RBP13.97□□□□□ -0.17
ATRX-208ENST00000622960 HOOK1Q9UJC3 728 aaKnown RBP13.97□□□□□ -0.17
ATRX-208ENST00000622960 TICRRQ7Z2Z1 1910 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 SLC38A8A6NNN8 435 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 A8MXQ7 604 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 KLRC4O43908 158 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 TACC1O75410 805 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 STAU1O95793 577 aaKnown RBP13.96□□□□□ -0.17
ATRX-208ENST00000622960 PDGFRBP09619 1106 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 FAM163BP0C2L3 166 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 KRT13P13646 458 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 RPL13P26373 211 aaKnown RBP13.96□□□□□ -0.17
ATRX-208ENST00000622960 TARSP26639 723 aaKnown RBP13.96□□□□□ -0.17
ATRX-208ENST00000622960 GRIK1P39086 918 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 MAGEA11P43364 429 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 MLLT6P55198 1093 aaPredicted RBP13.96□□□□□ -0.17
ATRX-208ENST00000622960 KCNB1Q14721 858 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 DDR2Q16832 855 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 ZNF667Q5HYK9 610 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 KRBA2Q6ZNG9 492 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 OSTM1Q86WC4 334 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 SLC9A9Q8IVB4 645 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 CMTM8Q8IZV2 173 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 MAB21L3Q8N8X9 362 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 CCDC150Q8NCX0 1101 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 KBTBD7Q8WVZ9 684 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 MYLPFQ96A32 169 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 TRPC7Q9HCX4 862 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 RMND1Q9NWS8 449 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 DLGAP2Q9P1A6 1054 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 FBXO4Q9UKT5 387 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 ZDHHC9Q9Y397 364 aa13.96□□□□□ -0.17
ATRX-208ENST00000622960 TRAV19A0A0A6YYK7 116 aa13.95□□□□□ -0.18
ATRX-208ENST00000622960 FAM237AA0A1B0GTK4 181 aa13.95□□□□□ -0.18
ATRX-208ENST00000622960 MYBPHLA2RUH7 354 aa13.95□□□□□ -0.18
ATRX-208ENST00000622960 PRR23AA6NEV1 266 aa13.95□□□□□ -0.18
ATRX-208ENST00000622960 LRRN2O75325 713 aa13.95□□□□□ -0.18
ATRX-208ENST00000622960 NOL4O94818 638 aa13.95□□□□□ -0.18
ATRX-208ENST00000622960 RHOBTB3O94955 611 aa13.95□□□□□ -0.18
ATRX-208ENST00000622960 CKMP06732 381 aa13.95□□□□□ -0.18
ATRX-208ENST00000622960 MYL6P60660 151 aa13.95□□□□□ -0.18
ATRX-208ENST00000622960 AMPD2Q01433 879 aa13.95□□□□□ -0.18
ATRX-208ENST00000622960 NCOA4Q13772 614 aa13.95□□□□□ -0.18
ATRX-208ENST00000622960 MDH1BQ5I0G3 518 aa13.95□□□□□ -0.18
ATRX-208ENST00000622960 SDHAF4Q5VUM1 108 aa13.95□□□□□ -0.18
ATRX-208ENST00000622960 RALGPS2Q86X27 583 aaPredicted RBP13.95□□□□□ -0.18
ATRX-208ENST00000622960 MYCBPAPQ8TBZ2 947 aa13.95□□□□□ -0.18
ATRX-208ENST00000622960 PARD3BQ8TEW8 1205 aa13.95□□□□□ -0.18
ATRX-208ENST00000622960 TNIP3Q96KP6 325 aa13.95□□□□□ -0.18
ATRX-208ENST00000622960 ELOVL4Q9GZR5 314 aa13.95□□□□□ -0.18
ATRX-208ENST00000622960 IL21Q9HBE4 155 aa13.95□□□□□ -0.18
ATRX-208ENST00000622960 TDP1Q9NUW8 608 aa13.95□□□□□ -0.18
ATRX-208ENST00000622960 PIEZO1Q92508 2521 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 LRRIQ3A6PVS8 624 aaPredicted RBP13.94□□□□□ -0.18
ATRX-208ENST00000622960 NRG2O14511 850 aaPredicted RBP13.94□□□□□ -0.18
ATRX-208ENST00000622960 KINO60870 393 aaKnown RBP13.94□□□□□ -0.18
ATRX-208ENST00000622960 ZNF202O95125 648 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 PRAMEF12O95522 483 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 CST3P01034 146 aaPredicted RBP13.94□□□□□ -0.18
ATRX-208ENST00000622960 USP17L7P0C7H9 530 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 SP9P0CG40 484 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 HMGA1P17096 107 aaKnown RBP13.94□□□□□ -0.18
ATRX-208ENST00000622960 BDNFP23560 247 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 NR2F2P24468 414 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 CCNE1P24864 410 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 LMO2P25791 158 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 PIK3CAP42336 1068 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 CASP4P49662 377 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 GPR15P49685 360 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 ITPRIPL2Q3MIP1 535 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 ZNF528Q3MIS6 628 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 FAM171BQ6P995 826 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 POTEHQ6S545 545 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 DENND5BQ6ZUT9 1274 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 INTS8Q75QN2 995 aaKnown RBP13.94□□□□□ -0.18
ATRX-208ENST00000622960 MON1AQ86VX9 555 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 GPIHBP1Q8IV16 184 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 TTC16Q8NEE8 873 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 TMC2Q8TDI7 906 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 TMEM174Q8WUU8 243 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 TAF4BQ92750 862 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 CLDN23Q96B33 292 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 SPATA17Q96L03 361 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 PKMYT1Q99640 499 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 HINFPQ9BQA5 517 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 MED10Q9BTT4 135 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 MKNK1Q9BUB5 465 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 SLC46A2Q9BY10 475 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 GTPBP4Q9BZE4 634 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms