RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 TCP1P17987 556 aaKnown RBP9.53□□□□□ -0.88
HDAC9-229ENST00000622668 CLCNKBP51801 687 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 CASP5P51878 434 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 LMNB2Q03252 620 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 PSMD6Q15008 389 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 TRIM65Q6PJ69 517 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 HERC6Q8IVU3 1022 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 CHPFQ8IZ52 775 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 OR6P1Q8NGX9 317 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 ADAM32Q8TC27 787 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 SMYD2Q9NRG4 433 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 AGPAT5Q9NUQ2 364 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 TUBGCP4Q9UGJ1 667 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 CBX4O00257 560 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 FOXN3O00409 490 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-229ENST00000622668 WNT7AO00755 349 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 NCAM2O15394 837 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 LZTS3O60299 673 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-229ENST00000622668 MFAP3LO75121 409 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 TJP3O95049 919 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 PCDH8O95206 1070 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 KRT15P19012 456 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 SMAD3P84022 425 aaKnown RBP9.53□□□□□ -0.88
HDAC9-229ENST00000622668 MAP3K10Q02779 954 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 HIC1Q14526 733 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 SPDYE1Q8NFV5 336 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-229ENST00000622668 PPP4R1Q8TF05 950 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 SUSD6Q92537 303 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 AGAP3Q96P47 875 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 CATSPERBQ9H7T0 1116 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 TBC1D13Q9NVG8 400 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 MARCH2Q9P0N8 246 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 TRIM66O15016 1216 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 BUB1BO60566 1050 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-229ENST00000622668 TIMP1P01033 207 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 RHOCP08134 193 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 SETSIPP0DME0 302 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 GTF2BQ00403 316 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 MIR1-1HGQ9H1L0 117 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 SEMA6BQ9H3T3 888 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 SARS2Q9NP81 518 aaKnown RBP9.53□□□□□ -0.88
HDAC9-229ENST00000622668 ZKSCAN5Q9Y2L8 839 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 C2CD2Q9Y426 696 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 C5P01031 1676 aa9.53□□□□□ -0.88
HDAC9-229ENST00000622668 XIRP1Q702N8 1843 aaKnown RBP9.52□□□□□ -0.88
HDAC9-229ENST00000622668 CNMDO75829 334 aa9.52□□□□□ -0.88
HDAC9-229ENST00000622668 SLU7O95391 586 aaKnown RBP9.52□□□□□ -0.88
HDAC9-229ENST00000622668 USP17L7P0C7H9 530 aa9.52□□□□□ -0.88
HDAC9-229ENST00000622668 GPD1P21695 349 aa9.52□□□□□ -0.88
HDAC9-229ENST00000622668 TBX4P57082 545 aa9.52□□□□□ -0.88
HDAC9-229ENST00000622668 TAP1Q03518 808 aa9.52□□□□□ -0.88
HDAC9-229ENST00000622668 PREPLQ4J6C6 727 aaPredicted RBP9.52□□□□□ -0.88
HDAC9-229ENST00000622668 TIGD5Q53EQ6 642 aa9.52□□□□□ -0.88
HDAC9-229ENST00000622668 TTC23LQ6PF05 361 aa9.52□□□□□ -0.88
HDAC9-229ENST00000622668 UNC45BQ8IWX7 931 aa9.52□□□□□ -0.88
HDAC9-229ENST00000622668 MCUQ8NE86 351 aa9.52□□□□□ -0.88
HDAC9-229ENST00000622668 GLIS3Q8NEA6 775 aa9.52□□□□□ -0.88
HDAC9-229ENST00000622668 SPPL2BQ8TCT7 592 aa9.52□□□□□ -0.88
HDAC9-229ENST00000622668 CDKL2Q92772 493 aa9.52□□□□□ -0.88
HDAC9-229ENST00000622668 RAB17Q9H0T7 212 aa9.52□□□□□ -0.88
HDAC9-229ENST00000622668 SMYD3Q9H7B4 428 aa9.52□□□□□ -0.88
HDAC9-229ENST00000622668 ATMINO43313 823 aaPredicted RBP9.52□□□□□ -0.89
HDAC9-229ENST00000622668 ZMYND10O75800 440 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 CPP00450 1065 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 F9P00740 461 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 TUBB4AP04350 444 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 SMTNL2Q2TAL5 461 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 PRR23CQ6ZRP0 262 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 KIAA0895Q8NCT3 520 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 UHMK1Q8TAS1 419 aaKnown RBP9.52□□□□□ -0.89
HDAC9-229ENST00000622668 BSNDQ8WZ55 320 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 FAM107BQ9H098 131 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 TLR9Q9NR96 1032 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 A0A0U1RQF3 1178 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 NRP1O14786 923 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 CAND2O75155 1236 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 FGF18O76093 207 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 FBXO21O94952 628 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 MYBL1P10243 752 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 CDC25CP30307 473 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 GATMP50440 423 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 PDE1BQ01064 536 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 E2F5Q15329 346 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 CFAP157Q5JU67 520 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 RHOT1Q8IXI2 618 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 DCLK2Q8N568 766 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 ST13P5Q8NFI4 369 aaPredicted RBP9.52□□□□□ -0.89
HDAC9-229ENST00000622668 OR5B17Q8NGF7 314 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 MYLPFQ96A32 169 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 CDK5RAP1Q96SZ6 601 aaKnown RBP9.52□□□□□ -0.89
HDAC9-229ENST00000622668 SELENOSQ9BQE4 189 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 PLCD4Q9BRC7 762 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 ULBP1Q9BZM6 244 aa9.52□□□□□ -0.89
HDAC9-229ENST00000622668 EIF3CLB5ME19 914 aaKnown RBP9.51□□□□□ -0.89
HDAC9-229ENST00000622668 KPNA3O00505 521 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-229ENST00000622668 MX2P20592 715 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 MYBPC2Q14324 1141 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 SMAD1Q15797 465 aaKnown RBP9.51□□□□□ -0.89
HDAC9-229ENST00000622668 BBS9Q3SYG4 887 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 FNDC3BQ53EP0 1204 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms