RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 AGTP01019 485 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 KRT5P13647 590 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 KCNA2P16389 499 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 CCR3P51677 355 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 SOX10P56693 466 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 WDR72Q3MJ13 1102 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 SPDYE2Q495Y8 402 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 PCNX4Q63HM2 1172 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 ACAD10Q6JQN1 1059 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 TMEM161BQ8NDZ6 487 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 FLAD1Q8NFF5 587 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 PSPC1Q8WXF1 523 aaKnown RBP13.07□□□□□ -0.32
LITAF-221ENST00000622633 DDX1Q92499 740 aaKnown RBP13.07□□□□□ -0.32
LITAF-221ENST00000622633 NT5C1BQ96P26 610 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 PI4K2AQ9BTU6 479 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 PTTG2Q9NZH5 202 aa13.07□□□□□ -0.32
LITAF-221ENST00000622633 ZNF646O15015 1829 aaPredicted RBP13.06□□□□□ -0.32
LITAF-221ENST00000622633 DENND3A2RUS2 1198 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 GRIN3BO60391 1043 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 MGEA5O60502 916 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 PDE5AO76074 875 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 CCNE2O96020 404 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 NPTX2P47972 431 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 IFNAR2P48551 515 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 SERPINB8P50452 374 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 MSLNQ13421 630 aaPredicted RBP13.06□□□□□ -0.32
LITAF-221ENST00000622633 AUHQ13825 339 aaKnown RBP13.06□□□□□ -0.32
LITAF-221ENST00000622633 Q6ZNX1 250 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 C4orf19Q8IY42 314 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 ASCC2Q9H1I8 757 aaPredicted RBP13.06□□□□□ -0.32
LITAF-221ENST00000622633 TMEM8AQ9HCN3 771 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 TBC1D22BQ9NU19 505 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 RAB20Q9NX57 234 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 UVRAGQ9P2Y5 699 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 SSX2IPQ9Y2D8 614 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 FBP2O00757 339 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 ADAM23O75077 832 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 SUN1O94901 812 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 HSPA1LP34931 641 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 TUFMP49411 452 aaKnown RBP13.06□□□□□ -0.32
LITAF-221ENST00000622633 GPC3P51654 580 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 PSMC5P62195 406 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 SNRPFP62306 86 aaKnown RBP13.06□□□□□ -0.32
LITAF-221ENST00000622633 DCTN2Q13561 401 aaKnown RBP13.06□□□□□ -0.32
LITAF-221ENST00000622633 DEPDC1Q5TB30 811 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 CAPN12Q6ZSI9 719 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 CYFIP1Q7L576 1253 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 MCF2L2Q86YR7 1114 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 TMEM109Q9BVC6 243 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 LRMDAQ9H2I8 198 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 DENND2DQ9H6A0 471 aaPredicted RBP13.06□□□□□ -0.32
LITAF-221ENST00000622633 LRRC19Q9H756 370 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 DDX43Q9NXZ2 648 aaKnown RBP13.06□□□□□ -0.32
LITAF-221ENST00000622633 CLIC5Q9NZA1 410 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 EXOC7Q9UPT5 735 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 COQ4Q9Y3A0 265 aa13.06□□□□□ -0.32
LITAF-221ENST00000622633 ACSL3O95573 720 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 HMGB2P26583 209 aaKnown RBP13.05□□□□□ -0.32
LITAF-221ENST00000622633 RPS6P62753 249 aaKnown RBP13.05□□□□□ -0.32
LITAF-221ENST00000622633 CALCOCO2Q13137 446 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 TRIP13Q15645 432 aaPredicted RBP13.05□□□□□ -0.32
LITAF-221ENST00000622633 LONRF1Q17RB8 773 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 SGO2Q562F6 1265 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 SLC39A4Q6P5W5 647 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 SV2AQ7L0J3 742 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 FBXL13Q8NEE6 735 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 ATG4AQ8WYN0 398 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 BSNDQ8WZ55 320 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 PPP1R10Q96QC0 940 aaKnown RBP13.05□□□□□ -0.32
LITAF-221ENST00000622633 GMLQ99445 158 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 AAASQ9NRG9 546 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 CHST7Q9NS84 486 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 DNAJC17Q9NVM6 304 aaKnown RBP13.05□□□□□ -0.32
LITAF-221ENST00000622633 TCEAL9Q9UHQ7 104 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 ANAPC7Q9UJX3 599 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 IQCA1LA6NCM1 817 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 O00370 1275 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 FSCN2O14926 492 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 TP73O15350 636 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 OR6B1O95007 311 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 MAPK4P31152 587 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 KRT17Q04695 432 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 DMP1Q13316 513 aaPredicted RBP13.05□□□□□ -0.32
LITAF-221ENST00000622633 CLEC16AQ2KHT3 1053 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 C2CD6Q53TS8 623 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 LLGL2Q6P1M3 1020 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 C11orf74Q86VG3 221 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 KBTBD2Q8IY47 623 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 AGGF1Q8N302 714 aaeCLIP13.05□□□□□ -0.32
LITAF-221ENST00000622633 C12orf50Q8NA57 414 aaPredicted RBP13.05□□□□□ -0.32
LITAF-221ENST00000622633 CFAP61Q8NHU2 1237 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 POMGNT1Q8WZA1 660 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 RUNDC3BQ96NL0 473 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 HEPHQ9BQS7 1158 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 HERPUD2Q9BSE4 406 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 NDEL1Q9GZM8 345 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 TRPC7Q9HCX4 862 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 KMT5AQ9NQR1 393 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 IL1RAPL1Q9NZN1 696 aa13.05□□□□□ -0.32
LITAF-221ENST00000622633 ASIC3Q9UHC3 531 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms