RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ADORA2BP29275 332 aa22.65■■□□□ 1.22
SPAST-204ENST00000621856 RGS7P49802 495 aa22.65■■□□□ 1.22
SPAST-204ENST00000621856 SLC7A5Q01650 507 aa22.65■■□□□ 1.22
SPAST-204ENST00000621856 ZNF598Q86UK7 904 aaKnown RBP22.65■■□□□ 1.22
SPAST-204ENST00000621856 RTN4RL1Q86UN2 441 aaPredicted RBP22.65■■□□□ 1.22
SPAST-204ENST00000621856 TTC30AQ86WT1 665 aa22.65■■□□□ 1.22
SPAST-204ENST00000621856 RHOT1Q8IXI2 618 aa22.65■■□□□ 1.22
SPAST-204ENST00000621856 ARFGAP3Q9NP61 516 aa22.65■■□□□ 1.22
SPAST-204ENST00000621856 OGDHLQ9ULD0 1010 aa22.65■■□□□ 1.22
SPAST-204ENST00000621856 PSTPIP1O43586 416 aa22.64■■□□□ 1.21
SPAST-204ENST00000621856 ZMYND10O75800 440 aa22.64■■□□□ 1.21
SPAST-204ENST00000621856 IGFBP6P24592 240 aaPredicted RBP22.64■■□□□ 1.21
SPAST-204ENST00000621856 GJC1P36383 396 aa22.64■■□□□ 1.21
SPAST-204ENST00000621856 OGDHQ02218 1023 aa22.64■■□□□ 1.21
SPAST-204ENST00000621856 PIGHQ14442 188 aaPredicted RBP22.64■■□□□ 1.21
SPAST-204ENST00000621856 PKDCCQ504Y2 493 aa22.64■■□□□ 1.21
SPAST-204ENST00000621856 CC2D1AQ6P1N0 951 aaPredicted RBP22.64■■□□□ 1.21
SPAST-204ENST00000621856 SLC24A5Q71RS6 500 aa22.64■■□□□ 1.21
SPAST-204ENST00000621856 HDAC7Q8WUI4 952 aa22.64■■□□□ 1.21
SPAST-204ENST00000621856 DDX27Q96GQ7 796 aaKnown RBP22.64■■□□□ 1.21
SPAST-204ENST00000621856 C9IYK1 514 aa22.63■■□□□ 1.21
SPAST-204ENST00000621856 PIK3R2O00459 728 aa22.63■■□□□ 1.21
SPAST-204ENST00000621856 SEC31AO94979 1220 aaKnown RBP22.63■■□□□ 1.21
SPAST-204ENST00000621856 HSPA6P17066 643 aa22.63■■□□□ 1.21
SPAST-204ENST00000621856 TAS2R40P59535 323 aa22.63■■□□□ 1.21
SPAST-204ENST00000621856 ZNF252P-AS1Q0IIN9 211 aa22.63■■□□□ 1.21
SPAST-204ENST00000621856 TUSC3Q13454 348 aa22.63■■□□□ 1.21
SPAST-204ENST00000621856 UPP1Q16831 310 aa22.63■■□□□ 1.21
SPAST-204ENST00000621856 OR6B2Q6IFH4 312 aa22.63■■□□□ 1.21
SPAST-204ENST00000621856 C3orf58Q8NDZ4 430 aa22.63■■□□□ 1.21
SPAST-204ENST00000621856 JOSD2Q8TAC2 188 aa22.63■■□□□ 1.21
SPAST-204ENST00000621856 RUBCNQ92622 972 aa22.63■■□□□ 1.21
SPAST-204ENST00000621856 MCRS1Q96EZ8 462 aa22.63■■□□□ 1.21
SPAST-204ENST00000621856 PAAF1Q9BRP4 392 aa22.63■■□□□ 1.21
SPAST-204ENST00000621856 FTHL17Q9BXU8 183 aa22.63■■□□□ 1.21
SPAST-204ENST00000621856 DMGDHQ9UI17 866 aaKnown RBP22.63■■□□□ 1.21
SPAST-204ENST00000621856 E5RJQ4 531 aa22.62■■□□□ 1.21
SPAST-204ENST00000621856 EOMESO95936 686 aa22.62■■□□□ 1.21
SPAST-204ENST00000621856 PSMA2P25787 234 aa22.62■■□□□ 1.21
SPAST-204ENST00000621856 RFC1P35251 1148 aaPredicted RBP22.62■■□□□ 1.21
SPAST-204ENST00000621856 PDE4CQ08493 712 aa22.62■■□□□ 1.21
SPAST-204ENST00000621856 FAM102AQ5T9C2 384 aaPredicted RBP22.62■■□□□ 1.21
SPAST-204ENST00000621856 GLB1LQ6UWU2 654 aa22.62■■□□□ 1.21
SPAST-204ENST00000621856 TMEM86AQ8N2M4 240 aa22.62■■□□□ 1.21
SPAST-204ENST00000621856 B3GALNT2Q8NCR0 500 aa22.62■■□□□ 1.21
SPAST-204ENST00000621856 LINC01599Q8WXQ3 324 aa22.62■■□□□ 1.21
SPAST-204ENST00000621856 DDX47Q9H0S4 455 aaKnown RBP22.62■■□□□ 1.21
SPAST-204ENST00000621856 WBP1LQ9NX94 342 aa22.62■■□□□ 1.21
SPAST-204ENST00000621856 STIM2Q9P246 746 aa22.62■■□□□ 1.21
SPAST-204ENST00000621856 TULP2O00295 520 aa22.62■■□□□ 1.21
SPAST-204ENST00000621856 PQBP1O60828 265 aaKnown RBP22.62■■□□□ 1.21
SPAST-204ENST00000621856 ACAT1P24752 427 aaKnown RBP22.62■■□□□ 1.21
SPAST-204ENST00000621856 BCAT1P54687 386 aa22.62■■□□□ 1.21
SPAST-204ENST00000621856 SNX16P57768 344 aa22.62■■□□□ 1.21
SPAST-204ENST00000621856 BST2Q10589 180 aaKnown RBP22.62■■□□□ 1.21
SPAST-204ENST00000621856 ANKRD52Q8NB46 1076 aa22.62■■□□□ 1.21
SPAST-204ENST00000621856 UROC1Q96N76 676 aa22.62■■□□□ 1.21
SPAST-204ENST00000621856 HINFPQ9BQA5 517 aa22.62■■□□□ 1.21
SPAST-204ENST00000621856 DDX43Q9NXZ2 648 aaKnown RBP22.62■■□□□ 1.21
SPAST-204ENST00000621856 F8VP50 259 aa22.61■■□□□ 1.21
SPAST-204ENST00000621856 GABRDO14764 452 aa22.61■■□□□ 1.21
SPAST-204ENST00000621856 RAD51CO43502 376 aa22.61■■□□□ 1.21
SPAST-204ENST00000621856 HEXIM1O94992 359 aaKnown RBP22.61■■□□□ 1.21
SPAST-204ENST00000621856 LHX1P48742 406 aa22.61■■□□□ 1.21
SPAST-204ENST00000621856 PMF1Q6P1K2 205 aa22.61■■□□□ 1.21
SPAST-204ENST00000621856 FAM183BPQ6ZVS7 135 aa22.61■■□□□ 1.21
SPAST-204ENST00000621856 SLC13A5Q86YT5 568 aaPredicted RBP22.61■■□□□ 1.21
SPAST-204ENST00000621856 NIPA2Q8N8Q9 360 aa22.61■■□□□ 1.21
SPAST-204ENST00000621856 SLC2A14Q8TDB8 520 aa22.61■■□□□ 1.21
SPAST-204ENST00000621856 SLC35F5Q8WV83 523 aa22.61■■□□□ 1.21
SPAST-204ENST00000621856 HNRNPLLQ8WVV9 542 aaKnown RBP22.61■■□□□ 1.21
SPAST-204ENST00000621856 PLEKHA4Q9H4M7 779 aa22.61■■□□□ 1.21
SPAST-204ENST00000621856 SLITRK6Q9H5Y7 841 aa22.61■■□□□ 1.21
SPAST-204ENST00000621856 ZNF446Q9NWS9 450 aa22.61■■□□□ 1.21
SPAST-204ENST00000621856 SART1O43290 800 aaKnown RBP22.6■■□□□ 1.21
SPAST-204ENST00000621856 ATP2C2O75185 946 aa22.6■■□□□ 1.21
SPAST-204ENST00000621856 B3GAT3O94766 335 aa22.6■■□□□ 1.21
SPAST-204ENST00000621856 PTPN1P18031 435 aaKnown RBP22.6■■□□□ 1.21
SPAST-204ENST00000621856 PPP2R5EQ16537 467 aa22.6■■□□□ 1.21
SPAST-204ENST00000621856 ZFYVE27Q5T4F4 411 aa22.6■■□□□ 1.21
SPAST-204ENST00000621856 CCDC50Q8IVM0 306 aa22.6■■□□□ 1.21
SPAST-204ENST00000621856 EMC1Q8N766 993 aa22.6■■□□□ 1.21
SPAST-204ENST00000621856 URGCPQ8TCY9 931 aa22.6■■□□□ 1.21
SPAST-204ENST00000621856 FNIP1Q8TF40 1166 aa22.6■■□□□ 1.21
SPAST-204ENST00000621856 STK32AQ8WU08 396 aa22.6■■□□□ 1.21
SPAST-204ENST00000621856 SLC4A5Q9BY07 1137 aa22.6■■□□□ 1.21
SPAST-204ENST00000621856 MTUS1Q9ULD2 1270 aa22.6■■□□□ 1.21
SPAST-204ENST00000621856 TIMM13Q9Y5L4 95 aaPredicted RBP22.6■■□□□ 1.21
SPAST-204ENST00000621856 INPPL1O15357 1258 aa22.6■■□□□ 1.21
SPAST-204ENST00000621856 NBNO60934 754 aa22.6■■□□□ 1.21
SPAST-204ENST00000621856 ODC1P11926 461 aa22.6■■□□□ 1.21
SPAST-204ENST00000621856 AARSP49588 968 aaKnown RBP eCLIP22.6■■□□□ 1.21
SPAST-204ENST00000621856 ATN1P54259 1190 aaPredicted RBP22.6■■□□□ 1.21
SPAST-204ENST00000621856 FAM189BP81408 668 aa22.6■■□□□ 1.21
SPAST-204ENST00000621856 MAP9Q49MG5 647 aa22.6■■□□□ 1.21
SPAST-204ENST00000621856 PAN2Q504Q3 1202 aaKnown RBP22.6■■□□□ 1.21
SPAST-204ENST00000621856 TIGD5Q53EQ6 642 aa22.6■■□□□ 1.21
SPAST-204ENST00000621856 KATNAL2Q8IYT4 538 aa22.6■■□□□ 1.21
SPAST-204ENST00000621856 CCDC26Q8TAB7 109 aa22.6■■□□□ 1.21
SPAST-204ENST00000621856 NR2E1Q9Y466 385 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms