RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 NT5C1BQ96P26 610 aa19.47■□□□□ 0.71
LITAF-220ENST00000620789 ASAH2Q9NR71 780 aa19.47■□□□□ 0.71
LITAF-220ENST00000620789 CISHQ9NSE2 258 aa19.47■□□□□ 0.71
LITAF-220ENST00000620789 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.47■□□□□ 0.71
LITAF-220ENST00000620789 NOTCH4Q99466 2003 aa19.47■□□□□ 0.71
LITAF-220ENST00000620789 KCNJ18B7U540 433 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 TRIM21P19474 475 aaKnown RBP19.46■□□□□ 0.71
LITAF-220ENST00000620789 BDNFP23560 247 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 TBXAS1P24557 533 aaPredicted RBP19.46■□□□□ 0.71
LITAF-220ENST00000620789 EEF1GP26641 437 aaKnown RBP19.46■□□□□ 0.71
LITAF-220ENST00000620789 GBP2P32456 591 aaPredicted RBP19.46■□□□□ 0.71
LITAF-220ENST00000620789 GPR15P49685 360 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 MYL5Q02045 173 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 KCNJ12Q14500 433 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 SLC5A9Q2M3M2 681 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 ANO6Q4KMQ2 910 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 PRSS36Q5K4E3 855 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 CYP4A22Q5TCH4 519 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 CDKAL1Q5VV42 579 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 PDZD4Q76G19 769 aaPredicted RBP19.46■□□□□ 0.71
LITAF-220ENST00000620789 DNAJB7Q7Z6W7 309 aaPredicted RBP19.46■□□□□ 0.71
LITAF-220ENST00000620789 TMC8Q8IU68 726 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 ZDHHC14Q8IZN3 488 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 HS6ST3Q8IZP7 471 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 PLCD3Q8N3E9 789 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 ITFG1Q8TB96 612 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 WHAMMQ8TF30 809 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 GIPC2Q8TF65 315 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 TWNKQ96RR1 684 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 MYADMQ96S97 322 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 TUBGCP2Q9BSJ2 902 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 NT5C1AQ9BXI3 368 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 LRRC3Q9BY71 257 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 B3GNT5Q9BYG0 378 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 ELOVL4Q9GZR5 314 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 MRPS23Q9Y3D9 190 aaKnown RBP19.46■□□□□ 0.71
LITAF-220ENST00000620789 PTPRDP23468 1912 aa19.46■□□□□ 0.71
LITAF-220ENST00000620789 CUL9Q8IWT3 2517 aa19.45■□□□□ 0.7
LITAF-220ENST00000620789 ZNF197O14709 1029 aa19.45■□□□□ 0.7
LITAF-220ENST00000620789 CCR2P41597 374 aa19.45■□□□□ 0.7
LITAF-220ENST00000620789 DDR2Q16832 855 aa19.45■□□□□ 0.7
LITAF-220ENST00000620789 TCP11X2Q5H9J9 407 aa19.45■□□□□ 0.7
LITAF-220ENST00000620789 SCN4BQ8IWT1 228 aa19.45■□□□□ 0.7
LITAF-220ENST00000620789 GPR152Q8TDT2 470 aa19.45■□□□□ 0.7
LITAF-220ENST00000620789 DNAI2Q9GZS0 605 aa19.45■□□□□ 0.7
LITAF-220ENST00000620789 NAT10Q9H0A0 1025 aaKnown RBP19.45■□□□□ 0.7
LITAF-220ENST00000620789 INTS2Q9H0H0 1204 aaKnown RBP19.45■□□□□ 0.7
LITAF-220ENST00000620789 GCNT4Q9P109 453 aa19.45■□□□□ 0.7
LITAF-220ENST00000620789 SYCE3A1L190 88 aa19.44■□□□□ 0.7
LITAF-220ENST00000620789 TNFRSF10AO00220 468 aa19.44■□□□□ 0.7
LITAF-220ENST00000620789 MICAL2O94851 1124 aa19.44■□□□□ 0.7
LITAF-220ENST00000620789 MYL4P12829 197 aa19.44■□□□□ 0.7
LITAF-220ENST00000620789 PRKCSHP14314 528 aaPredicted RBP19.44■□□□□ 0.7
LITAF-220ENST00000620789 GRIK1P39086 918 aa19.44■□□□□ 0.7
LITAF-220ENST00000620789 YWHAEP62258 255 aaKnown RBP19.44■□□□□ 0.7
LITAF-220ENST00000620789 TAF12Q16514 161 aa19.44■□□□□ 0.7
LITAF-220ENST00000620789 MIIPQ5JXC2 388 aa19.44■□□□□ 0.7
LITAF-220ENST00000620789 SDHAF4Q5VUM1 108 aa19.44■□□□□ 0.7
LITAF-220ENST00000620789 FAM35AQ86V20 835 aa19.44■□□□□ 0.7
LITAF-220ENST00000620789 RNF135Q8IUD6 432 aa19.44■□□□□ 0.7
LITAF-220ENST00000620789 PPM1KQ8N3J5 372 aa19.44■□□□□ 0.7
LITAF-220ENST00000620789 FGF13Q92913 245 aa19.44■□□□□ 0.7
LITAF-220ENST00000620789 TCEAL4Q96EI5 215 aa19.44■□□□□ 0.7
LITAF-220ENST00000620789 FUCA2Q9BTY2 467 aa19.44■□□□□ 0.7
LITAF-220ENST00000620789 ZNF518BQ9C0D4 1074 aa19.44■□□□□ 0.7
LITAF-220ENST00000620789 NDST4Q9H3R1 872 aa19.44■□□□□ 0.7
LITAF-220ENST00000620789 ZNF334Q9HCZ1 680 aaPredicted RBP19.44■□□□□ 0.7
LITAF-220ENST00000620789 FANCLQ9NW38 375 aa19.44■□□□□ 0.7
LITAF-220ENST00000620789 EPS15L1Q9UBC2 864 aa19.44■□□□□ 0.7
LITAF-220ENST00000620789 CDH7Q9ULB5 785 aa19.44■□□□□ 0.7
LITAF-220ENST00000620789 ZFP37Q9Y6Q3 630 aaPredicted RBP19.44■□□□□ 0.7
LITAF-220ENST00000620789 ATP8B3O60423 1300 aa19.44■□□□□ 0.7
LITAF-220ENST00000620789 DOCK8Q8NF50 2099 aa19.44■□□□□ 0.7
LITAF-220ENST00000620789 GTPBP10A4D1E9 387 aaKnown RBP19.43■□□□□ 0.7
LITAF-220ENST00000620789 CLDN5O00501 218 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 TRIM66O15016 1216 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 CSH1P0DML2 217 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 CSH2P0DML3 217 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 LAMP2P13473 410 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 CCDC130P13994 396 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 CEBPBP17676 345 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 GCNT1Q02742 428 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 VWA3BQ502W6 1294 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 ZNF394Q53GI3 561 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 GBP6Q6ZN66 633 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 PAQR9Q6ZVX9 377 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 ARHGEF19Q8IW93 802 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 NPAS3Q8IXF0 933 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 FUKQ8N0W3 1084 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 UBR7Q8N806 425 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 C12orf29Q8N999 325 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 STKLD1Q8NE28 680 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 ING5Q8WYH8 240 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 SPATA17Q96L03 361 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 CEP295NLQ96MC4 621 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 BPIFA3Q9BQP9 254 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 CRACR2AQ9BSW2 395 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 MED10Q9BTT4 135 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 FAM49BQ9NUQ9 324 aa19.43■□□□□ 0.7
LITAF-220ENST00000620789 SLC38A8A6NNN8 435 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms