RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 GAKO14976 1311 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 TRIM64CA6NLI5 447 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 PRPF4O43172 522 aaKnown RBP eCLIP10.86□□□□□ -0.67
VPS11-207ENST00000620429 CDH16O75309 829 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 ESRRAP11474 423 aaPredicted RBP10.86□□□□□ -0.67
VPS11-207ENST00000620429 NR2F2P24468 414 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 HOXD13P35453 343 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 STT3AP46977 705 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 HSD17B4P51659 736 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 SPCS2Q15005 226 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 PHKG1Q16816 387 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 OTOAQ7RTW8 1153 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 TMPRSS6Q8IU80 811 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 SP8Q8IXZ3 490 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 ZNF280CQ8ND82 737 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 CCDC110Q8TBZ0 833 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 BORCS5Q969J3 196 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 CENPOQ9BU64 300 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 OSBPL8Q9BZF1 889 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 TRNAU1APQ9NX07 287 aaKnown RBP10.86□□□□□ -0.67
VPS11-207ENST00000620429 KANSL3Q9P2N6 904 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 PCDHAC2Q9Y5I4 1007 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 DDX60LQ5H9U9 1706 aaKnown RBP10.85□□□□□ -0.67
VPS11-207ENST00000620429 ZMYM2Q9UBW7 1377 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 FRMPD2Q68DX3 1309 aaPredicted RBP10.85□□□□□ -0.67
VPS11-207ENST00000620429 TTLL13PA6NNM8 815 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 USP17L5A8MUK1 530 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 FOXO6A8MYZ6 492 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 E9PMD0 336 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 H3BSA7 217 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 PFDN6O15212 129 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 XPOTO43592 962 aaKnown RBP10.85□□□□□ -0.67
VPS11-207ENST00000620429 ITM2AO43736 263 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 MTRF1O75570 445 aaKnown RBP10.85□□□□□ -0.67
VPS11-207ENST00000620429 TM7SF2O76062 418 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 TNFAIP8O95379 198 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 APOEP02649 317 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 KRT18P05783 430 aaKnown RBP10.85□□□□□ -0.67
VPS11-207ENST00000620429 COPB2P35606 906 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 CETN2P41208 172 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 NT5C2P49902 561 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 ADCY7P51828 1080 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 PLEKHG4Q58EX7 1191 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 PPP2R2DQ66LE6 453 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 CCDC62Q6P9F0 684 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 SRRM1Q8IYB3 904 aaKnown RBP10.85□□□□□ -0.67
VPS11-207ENST00000620429 TMCO5AQ8N6Q1 288 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 TTC25Q96NG3 672 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 CYTH2Q99418 400 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 KCTD10Q9H3F6 313 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 ZNF287Q9HBT7 754 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 S100A14Q9HCY8 104 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 CLEC11AQ9Y240 323 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 NEU2Q9Y3R4 380 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 KMOO15229 486 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 DDX3YO15523 660 aaKnown RBP10.85□□□□□ -0.67
VPS11-207ENST00000620429 EDIL3O43854 480 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 FOLH1Q04609 750 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 ARHGEF6Q15052 776 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 DCAF17Q5H9S7 520 aaPredicted RBP10.85□□□□□ -0.67
VPS11-207ENST00000620429 TMEM63BQ5T3F8 832 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 DCAF12L1Q5VU92 463 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 TMC7Q7Z402 723 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 NLRX1Q86UT6 975 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 GPBP1Q86WP2 473 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 LRRC47Q8N1G4 583 aaKnown RBP10.85□□□□□ -0.67
VPS11-207ENST00000620429 CENPSQ8N2Z9 138 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 SPERTQ8NA61 448 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 NEDD1Q8NHV4 660 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 KLRG1Q96E93 195 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 MAELQ96JY0 434 aaKnown RBP10.85□□□□□ -0.67
VPS11-207ENST00000620429 PRPF18Q99633 342 aaKnown RBP10.85□□□□□ -0.67
VPS11-207ENST00000620429 KLHL3Q9UH77 587 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 NAALADL1Q9UQQ1 740 aa10.85□□□□□ -0.67
VPS11-207ENST00000620429 LOC105371267A0A1B0GV96 52 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 ESYT2A0FGR8 921 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 ACSL3O95573 720 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 UBL4AP11441 157 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 AKR1B1P15121 316 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 PON1P27169 355 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 ANXA13P27216 316 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 SERPINB6P35237 376 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 FXNQ16595 210 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 TRIM71Q2Q1W2 868 aaKnown RBP10.84□□□□□ -0.67
VPS11-207ENST00000620429 ZNF829Q3KNS6 432 aaPredicted RBP10.84□□□□□ -0.67
VPS11-207ENST00000620429 DALRD3Q5D0E6 543 aaKnown RBP10.84□□□□□ -0.67
VPS11-207ENST00000620429 GJC2Q5T442 439 aaPredicted RBP10.84□□□□□ -0.67
VPS11-207ENST00000620429 KYAT3Q6YP21 454 aaKnown RBP10.84□□□□□ -0.67
VPS11-207ENST00000620429 RHOT2Q8IXI1 618 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 ESX1Q8N693 406 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 TRIM55Q9BYV6 548 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 ZC3H12CQ9C0D7 883 aaKnown RBP10.84□□□□□ -0.67
VPS11-207ENST00000620429 NENFQ9UMX5 172 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 KIAA1024Q9UPX6 916 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 PCDHA2Q9Y5H9 948 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 FAM170AA1A519 330 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 TBKBP1A7MCY6 615 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 NOTOA8MTQ0 251 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 K7EPI3 171 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 CASQ2O14958 399 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms