RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 HPS4Q9NQG7 708 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 FAM49BQ9NUQ9 324 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 GARTP22102 1010 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 RPS12P25398 132 aaKnown RBP11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 PTGER2P43116 358 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 ST13P50502 369 aaKnown RBP11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 NCF4Q15080 339 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 PRPF39Q86UA1 669 aaKnown RBP11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 INPP5DQ92835 1189 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 CNDP1Q96KN2 507 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 POLE3Q9NRF9 147 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 M0R3G1 203 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 TAF6P49848 677 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 C12orf60Q5U649 245 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 ANGEL2Q5VTE6 544 aaKnown RBP11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 ZNF544Q6NX49 715 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 GAS2L3Q86XJ1 694 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 HERC6Q8IVU3 1022 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 HOMEZQ8IX15 550 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 TRMT2AQ8IZ69 625 aaKnown RBP11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 C19orf60Q96EN9 201 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 FAR2Q96K12 515 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 ADGRE3Q9BY15 652 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 NFKBIZQ9BYH8 718 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 SATB2Q9UPW6 733 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 E9PCH4 1651 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 DCDC2CA8MYV0 355 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 WLSQ5T9L3 541 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 MRNIPQ6NTE8 343 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 PHACTR4Q8IZ21 702 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 CCDC3Q9BQI4 270 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 RMND5AQ9H871 391 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 C17orf75Q9HAS0 396 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 LRRIQ1Q96JM4 1722 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 AIM2O14862 343 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 ALBP02768 609 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 THPOP40225 353 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 ARHGAP17Q68EM7 881 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 CYP4Z1Q86W10 505 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 CAPN10Q9HC96 672 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 NPTXRO95502 500 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 KBTBD12Q3ZCT8 623 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 TRIM9Q9C026 710 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 NMRK2Q9NPI5 230 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 CAND2O75155 1236 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 TGM2P21980 687 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 EN1Q05925 392 aaPredicted RBP11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 DPYDQ12882 1025 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 USP39Q53GS9 565 aaKnown RBP11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 MRPS26Q9BYN8 205 aaKnown RBP11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 UBXN6Q9BZV1 441 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 DIABLOQ9NR28 239 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 SNX12Q9UMY4 172 aa11.6□□□□□ -0.55
CCDC144B-208ENST00000618081 PP2D1A8MPX8 630 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 PLCL1Q15111 1095 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 PKN2Q16513 984 aaKnown RBP11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 AGGF1Q8N302 714 aaeCLIP11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 THTPAQ9BU02 230 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 PLA2R1Q13018 1463 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 ATP6V1C1P21283 382 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 SHROOM1Q2M3G4 852 aaPredicted RBP11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 SMTNL2Q2TAL5 461 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 NIF3L1Q9GZT8 377 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 MYOZ2Q9NPC6 264 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 DPP3Q9NY33 737 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 USP15Q9Y4E8 981 aaPredicted RBP11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 LRRC7Q96NW7 1537 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 STRNO43815 780 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 CYP2B6P20813 491 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 PLD1Q13393 1074 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 CYP51A1Q16850 503 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 CCDC157Q569K6 752 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 MS4A14Q96JA4 679 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 FRMD8P1Q9BZ68 369 aaPredicted RBP11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 CDC16Q13042 620 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 GPAT2Q6NUI2 795 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 RDM1Q8NG50 284 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 ZNF333Q96JL9 665 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 FAM84BQ96KN1 310 aaPredicted RBP11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 ADGRG1Q9Y653 693 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 VPS26AO75436 327 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 PTPN7P35236 360 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 HSPA13P48723 471 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 KPNA1P52294 538 aaPredicted RBP11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 CENPCQ03188 943 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 MTA1Q13330 715 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 KRR1Q13601 381 aaKnown RBP11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 LRIG3Q6UXM1 1119 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 MRPS31Q92665 395 aaKnown RBP11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 YIPF3Q9GZM5 350 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 KLC4Q9NSK0 619 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 MARCOQ9UEW3 520 aaPredicted RBP11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 STX7O15400 261 aaKnown RBP11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 CYP2C8P10632 490 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 UCHL3P15374 230 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 GPC1P35052 558 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 RAB14P61106 215 aa11.59□□□□□ -0.55
CCDC144B-208ENST00000618081 VSNL1P62760 191 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms