RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 ATP9AO75110 1047 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 GGPS1O95749 300 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 TIMP1P01033 207 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 ERBB2P04626 1255 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 POLR2MP0CAP2 368 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 CDK11BP21127 795 aaKnown RBP5.24□□□□□ -1.57
CUL3-216ENST00000617432 HSPA4P34932 840 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 LIFRP42702 1097 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 GIPRP48546 466 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 NT5C2P49902 561 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 RACK1P63244 317 aaKnown RBP5.24□□□□□ -1.57
CUL3-216ENST00000617432 SP4Q02446 784 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 FPGSQ05932 587 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 SART3Q15020 963 aaKnown RBP5.24□□□□□ -1.57
CUL3-216ENST00000617432 STXBP2Q15833 593 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 EMC4Q5J8M3 183 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 TMEM240Q5SV17 173 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 ZNF365Q70YC5 407 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 HEATR3Q7Z4Q2 680 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 TMCO2Q7Z6W1 182 aaPredicted RBP5.24□□□□□ -1.57
CUL3-216ENST00000617432 SGMS1Q86VZ5 419 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 MCF2L2Q86YR7 1114 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 DEFB123Q8N688 67 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 DTX3Q8N9I9 347 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 FANCBQ8NB91 859 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 SCFD2Q8WU76 684 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 ZBTB10Q96DT7 871 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 RNPC3Q96LT9 517 aaKnown RBP5.24□□□□□ -1.57
CUL3-216ENST00000617432 MTG1Q9BT17 334 aaPredicted RBP5.24□□□□□ -1.57
CUL3-216ENST00000617432 ALG1Q9BT22 464 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 SPZ1Q9BXG8 430 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 HIPK3Q9H422 1215 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 NCOA5Q9HCD5 579 aaKnown RBP5.24□□□□□ -1.57
CUL3-216ENST00000617432 METTL5Q9NRN9 209 aaKnown RBP5.24□□□□□ -1.57
CUL3-216ENST00000617432 NAP1L2Q9ULW6 460 aaPredicted RBP5.24□□□□□ -1.57
CUL3-216ENST00000617432 EMC9Q9Y3B6 208 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 MRVI1Q9Y6F6 885 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 CDH23Q9H251 3354 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 PTPRSQ13332 1948 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 LAMA2P24043 3122 aaKnown RBP5.24□□□□□ -1.57
CUL3-216ENST00000617432 GBF1Q92538 1859 aa5.24□□□□□ -1.57
CUL3-216ENST00000617432 EIF3JO75822 258 aaKnown RBP5.23□□□□□ -1.57
CUL3-216ENST00000617432 PEX11BO96011 259 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 GH1P01241 217 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 MYOGP15173 224 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 CPT1AP50416 773 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 RABGGTBP53611 331 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 CCT2P78371 535 aaKnown RBP5.23□□□□□ -1.57
CUL3-216ENST00000617432 TOB2Q14106 344 aaPredicted RBP5.23□□□□□ -1.57
CUL3-216ENST00000617432 GPNMBQ14956 572 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 STEAP3Q658P3 488 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 MFSD5Q6N075 450 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 VHLLQ6RSH7 139 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 OTOP2Q7RTS6 562 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 DEFB128Q7Z7B8 93 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 ZNF808Q8N4W9 903 aaPredicted RBP5.23□□□□□ -1.57
CUL3-216ENST00000617432 CYP2W1Q8TAV3 490 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 RASGRP4Q8TDF6 673 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 PHKBQ93100 1093 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 RRP36Q96EU6 259 aaKnown RBP5.23□□□□□ -1.57
CUL3-216ENST00000617432 SPATA32Q96LK8 384 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 UPF3BQ9BZI7 483 aaKnown RBP5.23□□□□□ -1.57
CUL3-216ENST00000617432 MTMR10Q9NXD2 777 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 HDAC6Q9UBN7 1215 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 Q9Y3F1 56 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 MROH7Q68CQ1 1323 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 LOC102724159A0A0B4J2E5 919 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 HAS3O00219 553 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 ZBTB43O43298 467 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 EDIL3O43854 480 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 ZEB2O60315 1214 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 FBXO21O94952 628 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 F2P00734 622 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 NAT2P11245 290 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 CASTP20810 708 aaKnown RBP5.23□□□□□ -1.57
CUL3-216ENST00000617432 RPS6KB1P23443 525 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 CCND2P30279 289 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 KIF5BP33176 963 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 PAK2Q13177 524 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 PWP2Q15269 919 aaKnown RBP5.23□□□□□ -1.57
CUL3-216ENST00000617432 CELF3Q5SZQ8 465 aaKnown RBP5.23□□□□□ -1.57
CUL3-216ENST00000617432 UTP14CQ5TAP6 766 aaKnown RBP5.23□□□□□ -1.57
CUL3-216ENST00000617432 GTF2IRD2BQ6EKJ0 949 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 LAIR1Q6GTX8 287 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 GTF2IRD2Q86UP8 949 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 PROSER1Q86XN7 944 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 DHX37Q8IY37 1157 aaKnown RBP5.23□□□□□ -1.57
CUL3-216ENST00000617432 ZNF513Q8N8E2 541 aaPredicted RBP5.23□□□□□ -1.57
CUL3-216ENST00000617432 ZNF764Q96H86 408 aaPredicted RBP5.23□□□□□ -1.57
CUL3-216ENST00000617432 TMEM169Q96HH4 297 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 SPATA33Q96N06 139 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 AIFM3Q96NN9 605 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 INPP4AQ96PE3 977 aaPredicted RBP5.23□□□□□ -1.57
CUL3-216ENST00000617432 IWS1Q96ST2 819 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 MAP3K14Q99558 947 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 C16orf70Q9BSU1 422 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 CYP26B1Q9NR63 512 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 PTGFRNQ9P2B2 879 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 SEC63Q9UGP8 760 aaKnown RBP5.23□□□□□ -1.57
CUL3-216ENST00000617432 PNMA2Q9UL42 364 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms