RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 TMC2Q8TDI7 906 aa19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 TRPM5Q9NZQ8 1165 aa19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 TTLL13PA6NNM8 815 aa19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 ALDH2P05091 517 aa19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 RPLP2P05387 115 aaKnown RBP19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 CYP24A1Q07973 514 aa19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 STX3Q13277 289 aa19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 CCNI2Q6ZMN8 369 aaPredicted RBP19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 FAM131BQ86XD5 332 aa19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 SLC13A5Q86YT5 568 aaPredicted RBP19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 TFB1MQ8WVM0 346 aaKnown RBP19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 CARD9Q9H257 536 aa19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 SNTG2Q9NY99 539 aa19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 F5H5T6 163 aa19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 F9P00740 461 aa19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 ALDH5A1P51649 535 aaPredicted RBP19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 HNRNPH2P55795 449 aaKnown RBP19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 PPATQ06203 517 aa19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 FBXO47Q5MNV8 452 aa19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 CENPPQ6IPU0 288 aa19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 REPS2Q8NFH8 660 aa19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 NRBF2Q96F24 287 aa19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 FHDC1Q9C0D6 1143 aaPredicted RBP19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 XPNPEP3Q9NQH7 507 aa19.3■□□□□ 0.68
AC008878.3-201ENST00000617428 ENDOD1O94919 500 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 ASS1P00966 412 aaKnown RBP19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 AKR1A1P14550 325 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 BCAT1P54687 386 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 EFEMP1Q12805 493 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 RGS9BPQ6ZS82 235 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 TLK2Q86UE8 772 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 CCDC33Q8N5R6 958 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 TPCN2Q8NHX9 752 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 MTG1Q9BT17 334 aaPredicted RBP19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 VPS33BQ9H267 617 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 CD274Q9NZQ7 290 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 CRLS1Q9UJA2 301 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 CARSP49589 748 aaKnown RBP19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 GRAMD1AQ96CP6 724 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 FOXP3Q9BZS1 431 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 POLR1AO95602 1720 aaPredicted RBP19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 ARHGAP10A1A4S6 786 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 TMEM150BA6NC51 233 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 CSE1LP55060 971 aaKnown RBP19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 MAP3K7CLP57077 242 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 CENPCQ03188 943 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 CUL3Q13618 768 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 SLC4A9Q96Q91 983 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 APOL5Q9BWW9 433 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 TSPYL2Q9H2G4 693 aaPredicted RBP19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 A1CFQ9NQ94 594 aaKnown RBP19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 ITM2BQ9Y287 266 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 DNAJC8O75937 253 aaPredicted RBP19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 RRM1P23921 792 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 MAPRE2Q15555 327 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 NFE2Q16621 373 aaPredicted RBP19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 ZNF280DQ6N043 979 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 RFWD2Q8NHY2 731 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 BLOC1S5Q8TDH9 187 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 GPATCH2LQ9NWQ4 482 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 USP20Q9Y2K6 914 aa19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.29■□□□□ 0.68
AC008878.3-201ENST00000617428 VIL1P09327 827 aaKnown RBP19.28■□□□□ 0.68
AC008878.3-201ENST00000617428 STIP1P31948 543 aaKnown RBP19.28■□□□□ 0.68
AC008878.3-201ENST00000617428 WDR49Q8IV35 697 aa19.28■□□□□ 0.68
AC008878.3-201ENST00000617428 TRIM17Q9Y577 477 aa19.28■□□□□ 0.68
AC008878.3-201ENST00000617428 ANXA9O76027 345 aa19.28■□□□□ 0.68
AC008878.3-201ENST00000617428 SNRPAP09012 282 aaKnown RBP19.28■□□□□ 0.68
AC008878.3-201ENST00000617428 AKAP5P24588 427 aa19.28■□□□□ 0.68
AC008878.3-201ENST00000617428 KDSRQ06136 332 aa19.28■□□□□ 0.68
AC008878.3-201ENST00000617428 MTFR1Q15390 333 aa19.28■□□□□ 0.68
AC008878.3-201ENST00000617428 FAM172AQ8WUF8 416 aa19.28■□□□□ 0.68
AC008878.3-201ENST00000617428 YIPF2Q9BWQ6 316 aa19.28■□□□□ 0.68
AC008878.3-201ENST00000617428 BAZ2BQ9UIF8 2168 aaKnown RBP19.28■□□□□ 0.68
AC008878.3-201ENST00000617428 ANGPT2O15123 496 aa19.28■□□□□ 0.68
AC008878.3-201ENST00000617428 COILP38432 576 aaPredicted RBP19.28■□□□□ 0.68
AC008878.3-201ENST00000617428 ALDH18A1P54886 795 aaKnown RBP19.28■□□□□ 0.68
AC008878.3-201ENST00000617428 PTPN11Q06124 597 aaPredicted RBP19.28■□□□□ 0.68
AC008878.3-201ENST00000617428 TEDDM1Q5T9Z0 273 aa19.28■□□□□ 0.68
AC008878.3-201ENST00000617428 LRRC8EQ6NSJ5 796 aa19.28■□□□□ 0.68
AC008878.3-201ENST00000617428 RFX8Q6ZV50 586 aa19.28■□□□□ 0.68
AC008878.3-201ENST00000617428 PRMT1Q99873 361 aaKnown RBP19.28■□□□□ 0.68
AC008878.3-201ENST00000617428 SLC39A10Q9ULF5 831 aa19.28■□□□□ 0.68
AC008878.3-201ENST00000617428 SPAG6O75602 509 aa19.27■□□□□ 0.68
AC008878.3-201ENST00000617428 OAZ1P54368 228 aa19.27■□□□□ 0.68
AC008878.3-201ENST00000617428 ERVK-9P63128 1117 aa19.27■□□□□ 0.68
AC008878.3-201ENST00000617428 ERVK-24P63145 666 aa19.27■□□□□ 0.68
AC008878.3-201ENST00000617428 POLD3Q15054 466 aaPredicted RBP19.27■□□□□ 0.68
AC008878.3-201ENST00000617428 TRADDQ15628 312 aa19.27■□□□□ 0.68
AC008878.3-201ENST00000617428 FKBP1CQ5VVH2 108 aa19.27■□□□□ 0.68
AC008878.3-201ENST00000617428 EMC1Q8N766 993 aa19.27■□□□□ 0.68
AC008878.3-201ENST00000617428 ZSWIM1Q9BR11 485 aa19.27■□□□□ 0.68
AC008878.3-201ENST00000617428 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.27■□□□□ 0.68
AC008878.3-201ENST00000617428 KDM4FA0A1W2PPD8 638 aa19.27■□□□□ 0.68
AC008878.3-201ENST00000617428 SLC12A8A0AV02 714 aa19.27■□□□□ 0.68
AC008878.3-201ENST00000617428 PTPRAP18433 802 aa19.27■□□□□ 0.68
AC008878.3-201ENST00000617428 LHX1P48742 406 aa19.27■□□□□ 0.68
AC008878.3-201ENST00000617428 CCDC15Q0P6D6 951 aa19.27■□□□□ 0.68
AC008878.3-201ENST00000617428 VGLL4Q14135 290 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms