RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 IER5Q5VY09 327 aa15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 ZNF449Q6P9G9 518 aa15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 KIAA1586Q9HCI6 787 aa15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 PCDHA3Q9Y5H8 950 aa15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 GLTPD2A6NH11 291 aa15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 PSMC1P62191 440 aaKnown RBP15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 TAF5Q15542 800 aa15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 CNGA2Q16280 664 aa15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 RAB6CQ53S08 254 aa15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 JADE1Q6IE81 842 aa15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 FBF1Q8TES7 1133 aa15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 RAB6CQ9H0N0 254 aa15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 PAPOLBQ9NRJ5 636 aaKnown RBP15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 A0A0G2JLL6 359 aaPredicted RBP15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 TMEM120BA0PK00 339 aa15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 POC1B-GALNT4F8VUJ3 575 aa15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 SOCS7O14512 581 aa15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 CYP1A2P05177 515 aa15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 CETPP11597 493 aa15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 UNGP13051 313 aaPredicted RBP15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 RFC1P35251 1148 aaPredicted RBP15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 MFSD7Q6UXD7 560 aa15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 PRRT2Q7Z6L0 340 aaPredicted RBP15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 VSIG1Q86XK7 387 aa15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 CENPTQ96BT3 561 aa15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 TWNKQ96RR1 684 aa15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 OSBPL8Q9BZF1 889 aa15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 G3BP2Q9UN86 482 aaKnown RBP15.22■□□□□ 0.03
SHROOM1-208ENST00000617339 MYO9BQ13459 2157 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 PECAM1P16284 738 aaPredicted RBP15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 BPIFB4P59827 614 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 NOMO3P69849 1222 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 SH3PXD2AQ5TCZ1 1133 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 PLVAPQ9BX97 442 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 CDT1Q9H211 546 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 SMARCAD1Q9H4L7 1026 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 MCM3APO60318 1980 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 CNTNAP2Q9UHC6 1331 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 H3BRB1 525 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 SGK1O00141 431 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 ATP2A1O14983 1001 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 ZBTB48P10074 688 aaPredicted RBP15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 ACO1P21399 889 aaKnown RBP15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 PSMA2P25787 234 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 CHRNA3P32297 505 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 ITGA8P53708 1063 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 ZNF200P98182 395 aaPredicted RBP15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 TFDP1Q14186 410 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 SPATA21Q7Z572 469 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 JOSD2Q8TAC2 188 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 TEKT4Q8WW24 435 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 OSMRQ99650 979 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 TMEM121Q9BTD3 319 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 TUT1Q9H6E5 874 aaKnown RBP15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 UVRAGQ9P2Y5 699 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 ANAPC5Q9UJX4 755 aa15.21■□□□□ 0.03
SHROOM1-208ENST00000617339 PASKQ96RG2 1323 aa15.21■□□□□ 0.02
SHROOM1-208ENST00000617339 EVPLQ92817 2033 aa15.21■□□□□ 0.02
SHROOM1-208ENST00000617339 M0QYV0 167 aa15.21■□□□□ 0.02
SHROOM1-208ENST00000617339 LGALS2P05162 132 aa15.21■□□□□ 0.02
SHROOM1-208ENST00000617339 PAPOLAP51003 745 aaKnown RBP15.21■□□□□ 0.02
SHROOM1-208ENST00000617339 RABGGTBP53611 331 aa15.21■□□□□ 0.02
SHROOM1-208ENST00000617339 BEX3Q00994 111 aa15.21■□□□□ 0.02
SHROOM1-208ENST00000617339 GHRHRQ02643 423 aa15.21■□□□□ 0.02
SHROOM1-208ENST00000617339 DUPD1Q68J44 220 aa15.21■□□□□ 0.02
SHROOM1-208ENST00000617339 ZC3H18Q86VM9 953 aaKnown RBP15.21■□□□□ 0.02
SHROOM1-208ENST00000617339 ARHGEF2Q92974 986 aaKnown RBP15.21■□□□□ 0.02
SHROOM1-208ENST00000617339 GPATCH2LQ9NWQ4 482 aa15.21■□□□□ 0.02
SHROOM1-208ENST00000617339 SNX9Q9Y5X1 595 aa15.21■□□□□ 0.02
SHROOM1-208ENST00000617339 SLC25A27O95847 323 aa15.2■□□□□ 0.02
SHROOM1-208ENST00000617339 ANXA13P27216 316 aa15.2■□□□□ 0.02
SHROOM1-208ENST00000617339 CA8P35219 290 aa15.2■□□□□ 0.02
SHROOM1-208ENST00000617339 RAB27AP51159 221 aa15.2■□□□□ 0.02
SHROOM1-208ENST00000617339 SH3D19Q5HYK7 790 aa15.2■□□□□ 0.02
SHROOM1-208ENST00000617339 C6orf118Q5T5N4 469 aa15.2■□□□□ 0.02
SHROOM1-208ENST00000617339 OR6B2Q6IFH4 312 aa15.2■□□□□ 0.02
SHROOM1-208ENST00000617339 ANKMY2Q8IV38 441 aa15.2■□□□□ 0.02
SHROOM1-208ENST00000617339 ERAP1Q9NZ08 941 aa15.2■□□□□ 0.02
SHROOM1-208ENST00000617339 PPP2R3BQ9Y5P8 575 aa15.2■□□□□ 0.02
SHROOM1-208ENST00000617339 STAM2O75886 525 aa15.2■□□□□ 0.02
SHROOM1-208ENST00000617339 LUC7L3O95232 432 aaKnown RBP15.2■□□□□ 0.02
SHROOM1-208ENST00000617339 ATF2P15336 505 aa15.2■□□□□ 0.02
SHROOM1-208ENST00000617339 TARSP26639 723 aaKnown RBP15.2■□□□□ 0.02
SHROOM1-208ENST00000617339 RFC5P40937 340 aa15.2■□□□□ 0.02
SHROOM1-208ENST00000617339 CETN2P41208 172 aa15.2■□□□□ 0.02
SHROOM1-208ENST00000617339 OGDHQ02218 1023 aa15.2■□□□□ 0.02
SHROOM1-208ENST00000617339 TMEM154Q6P9G4 183 aa15.2■□□□□ 0.02
SHROOM1-208ENST00000617339 USP50Q70EL3 339 aaPredicted RBP15.2■□□□□ 0.02
SHROOM1-208ENST00000617339 FEZF2Q8TBJ5 459 aa15.2■□□□□ 0.02
SHROOM1-208ENST00000617339 KIF12Q96FN5 646 aa15.2■□□□□ 0.02
SHROOM1-208ENST00000617339 A0A1B0GVG6 124 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 ASB14A6NK59 587 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 BTBD19C9JJ37 291 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 CXCL11O14625 94 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 MXD4Q14582 209 aaPredicted RBP15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 C11orf63Q6NUN7 778 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 BRSK2Q8IWQ3 736 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 FGD4Q96M96 766 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms