RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 TSPAN3O60637 253 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 RPS6KA5O75582 802 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 RECQL4O94761 1208 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 ENDOD1O94919 500 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 NCAM1P13591 858 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 ALDH3A1P30838 453 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 NCKAP1LP55160 1127 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 ROR1Q01973 937 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 LAMC2Q13753 1193 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 NAA25Q14CX7 972 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 MYCBPAPQ8TBZ2 947 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 MCUR1Q96AQ8 359 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 CHMP6Q96FZ7 201 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 HES6Q96HZ4 224 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 UBR2Q8IWV8 1755 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 SLX4Q8IY92 1834 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 RFX1P22670 979 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 MIPP30301 263 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 IL9RQ01113 521 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 PCSK7Q16549 785 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 KIRREL3Q8IZU9 778 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 SLC2A14Q8TDB8 520 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 USP6NLQ92738 828 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 FAM81BQ96LP2 452 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 CPXM1Q96SM3 734 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 GPR20Q99678 358 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 NPHS2Q9NP85 383 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 DMAC2Q9NW81 257 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 CHD4Q14839 1912 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 PPEF2O14830 753 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 PHBP35232 272 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 RIOX2Q8IUF8 465 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 APPL2Q8NEU8 664 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 DNERQ8NFT8 737 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 ERLEC1Q96DZ1 483 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 RMDN2Q96LZ7 410 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 TSNARE1Q96NA8 513 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 TRABDQ9H4I3 376 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 VIPAS39Q9H9C1 493 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 C17orf75Q9HAS0 396 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 LRRC4CQ9HCJ2 640 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 PRDM5Q9NQX1 630 aaPredicted RBP15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 USP18Q9UMW8 372 aa15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 MYO18AQ92614 2054 aaKnown RBP15.53■□□□□ 0.08
TNFRSF11A-206ENST00000617039 ARHGAP42A6NI28 874 aa15.52■□□□□ 0.08
TNFRSF11A-206ENST00000617039 ACKR2O00590 384 aa15.52■□□□□ 0.08
TNFRSF11A-206ENST00000617039 KRT4P19013 534 aa15.52■□□□□ 0.08
TNFRSF11A-206ENST00000617039 SULT1E1P49888 294 aa15.52■□□□□ 0.08
TNFRSF11A-206ENST00000617039 JAM2P57087 298 aa15.52■□□□□ 0.08
TNFRSF11A-206ENST00000617039 PTGISQ16647 500 aa15.52■□□□□ 0.08
TNFRSF11A-206ENST00000617039 HEATR6Q6AI08 1181 aaKnown RBP15.52■□□□□ 0.08
TNFRSF11A-206ENST00000617039 CHADLQ6NUI6 762 aa15.52■□□□□ 0.08
TNFRSF11A-206ENST00000617039 MIB1Q86YT6 1006 aa15.52■□□□□ 0.08
TNFRSF11A-206ENST00000617039 EFCAB13Q8IY85 973 aa15.52■□□□□ 0.08
TNFRSF11A-206ENST00000617039 PGBD4Q96DM1 585 aa15.52■□□□□ 0.08
TNFRSF11A-206ENST00000617039 ACO2Q99798 780 aaKnown RBP15.52■□□□□ 0.08
TNFRSF11A-206ENST00000617039 TRAIPQ9BWF2 469 aa15.52■□□□□ 0.08
TNFRSF11A-206ENST00000617039 EIF2AQ9BY44 585 aaKnown RBP15.52■□□□□ 0.08
TNFRSF11A-206ENST00000617039 SUDS3Q9H7L9 328 aaPredicted RBP15.52■□□□□ 0.08
TNFRSF11A-206ENST00000617039 TUBGCP4Q9UGJ1 667 aa15.52■□□□□ 0.08
TNFRSF11A-206ENST00000617039 CFAP69A5D8W1 941 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 KIAA0391O15091 583 aaKnown RBP15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 P4HA2O15460 535 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 MICAL2O94851 1124 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 BAG2O95816 211 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 CETPP11597 493 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 ARL4CP56559 192 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 FYB2Q5VWT5 728 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 BRSK2Q8IWQ3 736 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 TMEM176AQ96HP8 235 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 CALR3Q96L12 384 aaKnown RBP15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 XPO6Q96QU8 1125 aaKnown RBP15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 TWNKQ96RR1 684 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 ABCF3Q9NUQ8 709 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 COL16A1Q07092 1604 aaPredicted RBP15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 A0A0B4J269 797 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 M0QYT0 321 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 SUN1O94901 812 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 KRT7P08729 469 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 TPH1P17752 444 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 MARSP56192 900 aaKnown RBP15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 FOXD4Q12950 439 aaPredicted RBP15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 ACVR2BQ13705 512 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 SURF1Q15526 300 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 PTPN20Q4JDL3 420 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 TADA2BQ86TJ2 420 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 HVCN1Q96D96 273 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 NMRK2Q9NPI5 230 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 GDF3Q9NR23 364 aa15.52■□□□□ 0.07
TNFRSF11A-206ENST00000617039 DDX3YO15523 660 aaKnown RBP15.51■□□□□ 0.07
TNFRSF11A-206ENST00000617039 STK10O94804 968 aaKnown RBP15.51■□□□□ 0.07
TNFRSF11A-206ENST00000617039 AMPD1P23109 780 aa15.51■□□□□ 0.07
TNFRSF11A-206ENST00000617039 TMPRSS15P98073 1019 aa15.51■□□□□ 0.07
TNFRSF11A-206ENST00000617039 DENND5BQ6ZUT9 1274 aa15.51■□□□□ 0.07
TNFRSF11A-206ENST00000617039 SEC16BQ96JE7 1060 aa15.51■□□□□ 0.07
TNFRSF11A-206ENST00000617039 MAGEB5Q9BZ81 275 aa15.51■□□□□ 0.07
TNFRSF11A-206ENST00000617039 EPN3Q9H201 632 aa15.51■□□□□ 0.07
TNFRSF11A-206ENST00000617039 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.51■□□□□ 0.07
TNFRSF11A-206ENST00000617039 PCDHA3Q9Y5H8 950 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms