RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 PEX6Q13608 980 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 C18orf25Q96B23 403 aaPredicted RBP13.12□□□□□ -0.31
TCF4-248ENST00000616053 ZNF354BQ96LW1 612 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 ZCCHC2Q9C0B9 1178 aaKnown RBP13.12□□□□□ -0.31
TCF4-248ENST00000616053 AFF2P51816 1311 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 MAGEB2O15479 319 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 STAU1O95793 577 aaKnown RBP13.12□□□□□ -0.31
TCF4-248ENST00000616053 RPL10AP62906 217 aaKnown RBP13.12□□□□□ -0.31
TCF4-248ENST00000616053 BLOC1S5Q8TDH9 187 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 THUMPD3Q9BV44 507 aaKnown RBP13.12□□□□□ -0.31
TCF4-248ENST00000616053 TASP1Q9H6P5 420 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 IL1RL2Q9HB29 575 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 C20orf96Q9NUD7 363 aaPredicted RBP13.12□□□□□ -0.31
TCF4-248ENST00000616053 SRP68Q9UHB9 627 aaKnown RBP13.12□□□□□ -0.31
TCF4-248ENST00000616053 CPSF4O95639 269 aaKnown RBP13.12□□□□□ -0.31
TCF4-248ENST00000616053 VAV1P15498 845 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 ATP5F1P24539 256 aaPredicted RBP13.12□□□□□ -0.31
TCF4-248ENST00000616053 MAPK1P28482 360 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 DDI2Q5TDH0 399 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 PRUNE1Q86TP1 453 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 AVILO75366 819 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 LRRC49Q8IUZ0 686 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 ATXN3LQ9H3M9 355 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 FDX1P10109 184 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 TAP1Q03518 808 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 PODXLO00592 558 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 PCCAP05165 728 aaPredicted RBP13.12□□□□□ -0.31
TCF4-248ENST00000616053 CDC27P30260 824 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 P3H1Q32P28 736 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 LLGL2Q6P1M3 1020 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 EFL1Q7Z2Z2 1120 aaKnown RBP13.12□□□□□ -0.31
TCF4-248ENST00000616053 PMM1Q92871 262 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 UBXN6Q9BZV1 441 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 RMND5AQ9H871 391 aa13.12□□□□□ -0.31
TCF4-248ENST00000616053 ZNF624Q9P2J8 865 aaPredicted RBP13.12□□□□□ -0.31
TCF4-248ENST00000616053 NEURL1BA8MQ27 555 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 IGFALSP35858 605 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 TRPV3Q8NET8 790 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 LINC00854A0A1B0GVQ3 168 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 SRP72O76094 671 aaKnown RBP13.11□□□□□ -0.31
TCF4-248ENST00000616053 IFNA14P01570 189 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 PAICSP22234 425 aaKnown RBP13.11□□□□□ -0.31
TCF4-248ENST00000616053 PDIA2Q13087 525 aaKnown RBP13.11□□□□□ -0.31
TCF4-248ENST00000616053 CTXN3Q4LDR2 81 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 DCAF6Q58WW2 860 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 PRMT1Q99873 361 aaKnown RBP13.11□□□□□ -0.31
TCF4-248ENST00000616053 NT5C1AQ9BXI3 368 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 TBKBP1A7MCY6 615 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 H0Y3Z8 333 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 OR10H2O60403 315 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 PGM3O95394 542 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 MIB1Q86YT6 1006 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 NKD1Q969G9 470 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 CLIC6Q96NY7 704 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 CLPBQ9H078 707 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 PLA2G4AP47712 749 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 ME3Q16798 604 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 NDUFAF6Q330K2 333 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 NOTUMQ6P988 496 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 ZSCAN1Q8NBB4 408 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 ABCC1P33527 1531 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 FOSL2P15408 326 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 ELK3P41970 407 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 KCNJ5P48544 419 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 MASP1P48740 699 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 ATP2C1P98194 919 aaPredicted RBP13.11□□□□□ -0.31
TCF4-248ENST00000616053 H2AFXP16104 143 aaPredicted RBP13.11□□□□□ -0.31
TCF4-248ENST00000616053 EIF2S3P41091 472 aaKnown RBP13.11□□□□□ -0.31
TCF4-248ENST00000616053 EIF3EP60228 445 aaKnown RBP13.11□□□□□ -0.31
TCF4-248ENST00000616053 COG2Q14746 738 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 TLK2Q86UE8 772 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 MYO1HQ8N1T3 1032 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 CHORDC1Q9UHD1 332 aaPredicted RBP13.11□□□□□ -0.31
TCF4-248ENST00000616053 MAP3K19Q56UN5 1328 aa13.11□□□□□ -0.31
TCF4-248ENST00000616053 WNK4Q96J92 1243 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 PARVAQ9NVD7 372 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 MRFAP1Q9Y605 127 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 CYP2C19P33261 490 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 ARF3P61204 181 aaPredicted RBP13.1□□□□□ -0.31
TCF4-248ENST00000616053 ARF1P84077 181 aaKnown RBP13.1□□□□□ -0.31
TCF4-248ENST00000616053 PLA2G4FQ68DD2 849 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 PMF1Q6P1K2 205 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 NARS2Q96I59 477 aaKnown RBP13.1□□□□□ -0.31
TCF4-248ENST00000616053 TUBGCP4Q9UGJ1 667 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 RNF112Q9ULX5 631 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 NOVA2Q9UNW9 492 aaKnown RBP13.1□□□□□ -0.31
TCF4-248ENST00000616053 OR10H1Q9Y4A9 318 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 MCIDASD6RGH6 385 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 TSPAN9O75954 239 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 FAM200BP0CF97 657 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 GPD1LQ8N335 351 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 VIPAS39Q9H9C1 493 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 NOX1Q9Y5S8 564 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 FLT1P17948 1338 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 RRN3P2A6NIE6 340 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 PDE8BO95263 885 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 SCP2P22307 547 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 PLIN5Q00G26 463 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 PKN2Q16513 984 aaKnown RBP13.1□□□□□ -0.31
TCF4-248ENST00000616053 CARTPTQ16568 116 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms