RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 TFRCP02786 760 aaKnown RBP11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 IGKV5-2P06315 115 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 YY1P25490 414 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 CDC25BP30305 580 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 RAD23BP54727 409 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 MARSP56192 900 aaKnown RBP11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 TMPRSS15P98073 1019 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 MPP3Q13368 585 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 WASHC2DQ5SRD0 308 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 DGLUCYQ7Z3D6 616 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ENGASEQ8NFI3 743 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 CRELD1Q96HD1 420 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 NARFQ9UHQ1 456 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PHF11Q9UIL8 331 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 TMEM2Q9UHN6 1383 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 RAD51DO75771 328 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 USP1O94782 785 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 UBXN11Q5T124 520 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 NRDE2Q9H7Z3 1164 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PHF24Q9UPV7 400 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 SH3BP1Q9Y3L3 701 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 EPN1Q9Y6I3 576 aaPredicted RBP11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 STAU1O95793 577 aaKnown RBP11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 CASP9P55211 416 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 SNRNP48Q6IEG0 339 aaKnown RBP11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 RHBGQ9H310 441 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 SLC39A2Q9NP94 309 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 NGRNQ9NPE2 291 aaKnown RBP11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 E2F3O00716 465 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 AKAP10O43572 662 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 HIST1H2AGP0C0S8 130 aaPredicted RBP11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 VCLP18206 1134 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 HIST1H2ADP20671 130 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 WLSQ5T9L3 541 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 GPBP1Q86WP2 473 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 SCUBE1Q8IWY4 988 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 SPICE1Q8N0Z3 855 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 CCDC197Q8NCU1 140 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 SYTL5Q8TDW5 730 aaPredicted RBP11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 CATSPER2Q96P56 530 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 DENND2AQ9ULE3 1009 aa11.25□□□□□ -0.61
CNTNAP3B-211ENST00000612828 MEI4A8MW99 385 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 SCAMP3O14828 347 aaKnown RBP11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 EIF3EP60228 445 aaKnown RBP11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 TFDP1Q14186 410 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ARMCX6Q7L4S7 300 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 VSTM4Q8IW00 320 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ASAP3Q8TDY4 903 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 LENG1Q96BZ8 264 aaPredicted RBP11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ITCHQ96J02 903 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 CLMNQ96JQ2 1002 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ZNF354BQ96LW1 612 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 RBCK1Q9BYM8 510 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 BRINP2Q9C0B6 783 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ZYG11BQ9C0D3 744 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ROGDIQ9GZN7 287 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PIF1Q9H611 641 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ZNF226Q9NYT6 803 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PLOD2O00469 737 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 GYG2O15488 501 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ATP9BO43861 1147 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 CLTBP09497 229 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ACTN3Q08043 901 aaPredicted RBP11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ATP8B4Q8TF62 1192 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 MAGOHBQ96A72 148 aaKnown RBP11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 KIAA1257Q9ULG3 409 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 HYKKA2RU49 373 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 SMNDC1O75940 238 aaKnown RBP eCLIP11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 BDH1Q02338 343 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ZNF544Q6NX49 715 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 HSDL2Q6YN16 418 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 TIMMDC1Q9NPL8 285 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 CD274Q9NZQ7 290 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 MAN1B1Q9UKM7 699 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ZBTB1Q9Y2K1 713 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 EIF4G3O43432 1585 aaKnown RBP11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ZBTB22O15209 634 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 TALDO1P37837 337 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 DOK7Q18PE1 504 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PGS1Q32NB8 556 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PUS10Q3MIT2 529 aaKnown RBP11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 GALNT4Q8N4A0 578 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ZNF879B4DU55 563 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PCDH8O95206 1070 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ABCB1P08183 1280 aaPredicted RBP11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 MMEP08473 750 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ITIH2P19823 946 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 IL10P22301 178 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 CAPZA1P52907 286 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 RAP1GAP2Q684P5 730 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 HIST2H2AA3Q6FI13 130 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 OTOAQ7RTW8 1153 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 C12orf4Q9NQ89 552 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PKD2L2Q9NZM6 624 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 CYP2D7A0A087X1C5 515 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 HNRNPDLO14979 420 aaKnown RBP11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PGK2P07205 417 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 SCNN1DP51172 638 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 CYP3A43Q9HB55 503 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms