RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 PKDCCQ504Y2 493 aa16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 TJAP1Q5JTD0 557 aa16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 TAF3Q5VWG9 929 aa16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 SLC8B1Q6J4K2 584 aa16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 PAQR9Q6ZVX9 377 aa16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 GLYCTKQ8IVS8 523 aa16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 ANKRD52Q8NB46 1076 aa16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 PPM1EQ8WY54 764 aa16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 TMEM209Q96SK2 561 aa16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 EIF3CQ99613 913 aaKnown RBP16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 LPIN3Q9BQK8 851 aa16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 C11orf84Q9BUA3 381 aaPredicted RBP16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 ZNF518BQ9C0D4 1074 aa16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 DEF6Q9H4E7 631 aa16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 RXFP1Q9HBX9 757 aa16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 FNIP2Q9P278 1114 aa16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 GTF3C4Q9UKN8 822 aa16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 GBF1Q92538 1859 aa16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 CDH23Q9H251 3354 aa16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 NLRC5Q86WI3 1866 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 A0A087X0T9 212 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 TNFRSF10AO00220 468 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 MICAL2O94851 1124 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 NDUFA10O95299 355 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 LSM8O95777 96 aaKnown RBP16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 URODP06132 367 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 CFHP08603 1231 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 FAM228BP0C875 321 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 UNGP13051 313 aaPredicted RBP16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 CREMQ03060 361 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 GPR17Q13304 367 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 MTF1Q14872 753 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 PSMD5Q16401 504 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 NFE2Q16621 373 aaPredicted RBP16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 MDH1BQ5I0G3 518 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 PRSS55Q6UWB4 352 aaPredicted RBP16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 RSPO2Q6UXX9 243 aaPredicted RBP16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 FUKQ8N0W3 1084 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 FBXO22Q8NEZ5 403 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 POF1BQ8WVV4 589 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 PCED1BQ96HM7 432 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 CLSTN3Q9BQT9 956 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 B3GNT5Q9BYG0 378 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 NKX2-4Q9H2Z4 354 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 MRPL17Q9NRX2 175 aaKnown RBP16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 TMLHEQ9NVH6 421 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 NAGPAQ9UK23 515 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 TSPAN16Q9UKR8 245 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 IRAK3Q9Y616 596 aa16.93■□□□□ 0.3
CLTCL1-207ENST00000611723 TMEM265A0A087WTH1 108 aa16.92■□□□□ 0.3
CLTCL1-207ENST00000611723 H3BNC9 293 aa16.92■□□□□ 0.3
CLTCL1-207ENST00000611723 FSCN2O14926 492 aa16.92■□□□□ 0.3
CLTCL1-207ENST00000611723 GPD2P43304 727 aa16.92■□□□□ 0.3
CLTCL1-207ENST00000611723 CLEC16AQ2KHT3 1053 aa16.92■□□□□ 0.3
CLTCL1-207ENST00000611723 C10orf76Q5T2E6 689 aa16.92■□□□□ 0.3
CLTCL1-207ENST00000611723 PPP1R2P3Q6NXS1 205 aa16.92■□□□□ 0.3
CLTCL1-207ENST00000611723 ALKBH5Q6P6C2 394 aaKnown RBP16.92■□□□□ 0.3
CLTCL1-207ENST00000611723 C4orf50Q6ZRC1 276 aa16.92■□□□□ 0.3
CLTCL1-207ENST00000611723 SPRED2Q7Z698 418 aa16.92■□□□□ 0.3
CLTCL1-207ENST00000611723 WDTC1Q8N5D0 677 aa16.92■□□□□ 0.3
CLTCL1-207ENST00000611723 TMEM35BQ8NCS4 154 aa16.92■□□□□ 0.3
CLTCL1-207ENST00000611723 SLC2A14Q8TDB8 520 aa16.92■□□□□ 0.3
CLTCL1-207ENST00000611723 C2orf15Q8WU43 125 aaKnown RBP16.92■□□□□ 0.3
CLTCL1-207ENST00000611723 FUBP3Q96I24 572 aaKnown RBP eCLIP16.92■□□□□ 0.3
CLTCL1-207ENST00000611723 DUSP16Q9BY84 665 aa16.92■□□□□ 0.3
CLTCL1-207ENST00000611723 PDCL3Q9H2J4 239 aa16.92■□□□□ 0.3
CLTCL1-207ENST00000611723 ALG13Q9NP73 1137 aaKnown RBP16.92■□□□□ 0.3
CLTCL1-207ENST00000611723 FAM49BQ9NUQ9 324 aa16.92■□□□□ 0.3
CLTCL1-207ENST00000611723 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.92■□□□□ 0.3
CLTCL1-207ENST00000611723 ZNF263O14978 683 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 CXCL14O95715 111 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 SETSIPP0DME0 302 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 CCDC130P13994 396 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 DNAJB1P25685 340 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 NOMO3P69849 1222 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 GFPT1Q06210 699 aaPredicted RBP16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 RAB33AQ14088 237 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 PTPN14Q15678 1187 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 GOLGA7BQ2TAP0 167 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 ACAD10Q6JQN1 1059 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 PDE12Q6L8Q7 609 aaKnown RBP16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 DENND1BQ6P3S1 775 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 TTC30AQ86WT1 665 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 PALB2Q86YC2 1186 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 STK32AQ8WU08 396 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 SLC35F5Q8WV83 523 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 MYLPFQ96A32 169 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 TRIM44Q96DX7 344 aaPredicted RBP16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 UBXN6Q9BZV1 441 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 ISCUQ9H1K1 167 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 ZNF576Q9H609 170 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 ABCB6Q9NP58 842 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 NGRNQ9NPE2 291 aaKnown RBP16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 SPTLC3Q9NUV7 552 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 HESX1Q9UBX0 185 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 CEP83Q9Y592 693 aa16.91■□□□□ 0.3
CLTCL1-207ENST00000611723 GRM6O15303 877 aa16.9■□□□□ 0.3
CLTCL1-207ENST00000611723 ADAM12O43184 909 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms