RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 GDAP2Q9NXN4 497 aa23.32■■□□□ 1.32
CBWD3-207ENST00000611426 OBP2AQ9NY56 170 aa23.32■■□□□ 1.32
CBWD3-207ENST00000611426 SNX9Q9Y5X1 595 aa23.32■■□□□ 1.32
CBWD3-207ENST00000611426 SLC38A8A6NNN8 435 aa23.31■■□□□ 1.32
CBWD3-207ENST00000611426 WEE1P30291 646 aa23.31■■□□□ 1.32
CBWD3-207ENST00000611426 MORC3Q14149 939 aa23.31■■□□□ 1.32
CBWD3-207ENST00000611426 IQCB1Q15051 598 aa23.31■■□□□ 1.32
CBWD3-207ENST00000611426 C1orf228Q6PIY5 440 aa23.31■■□□□ 1.32
CBWD3-207ENST00000611426 C11orf57Q6ZUT1 292 aaPredicted RBP23.31■■□□□ 1.32
CBWD3-207ENST00000611426 MSANTD3Q96H12 275 aa23.31■■□□□ 1.32
CBWD3-207ENST00000611426 CHRDQ9H2X0 955 aa23.31■■□□□ 1.32
CBWD3-207ENST00000611426 C8orf33Q9H7E9 229 aaPredicted RBP23.31■■□□□ 1.32
CBWD3-207ENST00000611426 ZSCAN32Q9NX65 697 aa23.31■■□□□ 1.32
CBWD3-207ENST00000611426 SIX4Q9UIU6 781 aa23.31■■□□□ 1.32
CBWD3-207ENST00000611426 NUP210Q8TEM1 1887 aaPredicted RBP23.31■■□□□ 1.32
CBWD3-207ENST00000611426 ACAT1P24752 427 aaKnown RBP23.3■■□□□ 1.32
CBWD3-207ENST00000611426 MYO1EQ12965 1108 aa23.3■■□□□ 1.32
CBWD3-207ENST00000611426 SURF1Q15526 300 aa23.3■■□□□ 1.32
CBWD3-207ENST00000611426 DPCR1Q3MIW9 517 aa23.3■■□□□ 1.32
CBWD3-207ENST00000611426 LMBRD2Q68DH5 695 aaPredicted RBP23.3■■□□□ 1.32
CBWD3-207ENST00000611426 CNNM4Q6P4Q7 775 aa23.3■■□□□ 1.32
CBWD3-207ENST00000611426 SUMF1Q8NBK3 374 aa23.3■■□□□ 1.32
CBWD3-207ENST00000611426 BPIFB1Q8TDL5 484 aa23.3■■□□□ 1.32
CBWD3-207ENST00000611426 RUBCNQ92622 972 aa23.3■■□□□ 1.32
CBWD3-207ENST00000611426 ZFYVE19Q96K21 471 aa23.3■■□□□ 1.32
CBWD3-207ENST00000611426 IER2Q9BTL4 223 aa23.3■■□□□ 1.32
CBWD3-207ENST00000611426 SLC46A2Q9BY10 475 aa23.3■■□□□ 1.32
CBWD3-207ENST00000611426 PRMT8Q9NR22 394 aaPredicted RBP23.3■■□□□ 1.32
CBWD3-207ENST00000611426 INTS13Q9NVM9 706 aa23.3■■□□□ 1.32
CBWD3-207ENST00000611426 HSPBP1Q9NZL4 362 aa23.3■■□□□ 1.32
CBWD3-207ENST00000611426 ZMYM5Q9UJ78 669 aa23.3■■□□□ 1.32
CBWD3-207ENST00000611426 MAN1B1Q9UKM7 699 aa23.3■■□□□ 1.32
CBWD3-207ENST00000611426 EIF3DO15371 548 aaKnown RBP eCLIP23.29■■□□□ 1.32
CBWD3-207ENST00000611426 PRAMEF12O95522 483 aa23.29■■□□□ 1.32
CBWD3-207ENST00000611426 TNNC2P02585 160 aa23.29■■□□□ 1.32
CBWD3-207ENST00000611426 CHRNB1P11230 501 aa23.29■■□□□ 1.32
CBWD3-207ENST00000611426 HOXD13P35453 343 aa23.29■■□□□ 1.32
CBWD3-207ENST00000611426 SOX9P48436 509 aa23.29■■□□□ 1.32
CBWD3-207ENST00000611426 LHX1P48742 406 aa23.29■■□□□ 1.32
CBWD3-207ENST00000611426 DUOXA2Q1HG44 320 aa23.29■■□□□ 1.32
CBWD3-207ENST00000611426 INTS6LQ5JSJ4 861 aaKnown RBP23.29■■□□□ 1.32
CBWD3-207ENST00000611426 CBWD2Q8IUF1 395 aa23.29■■□□□ 1.32
CBWD3-207ENST00000611426 ADGRF2Q8IZF7 708 aa23.29■■□□□ 1.32
CBWD3-207ENST00000611426 TOP6BLQ8N6T0 577 aa23.29■■□□□ 1.32
CBWD3-207ENST00000611426 MLKLQ8NB16 471 aa23.29■■□□□ 1.32
CBWD3-207ENST00000611426 ZBTB44Q8NCP5 570 aa23.29■■□□□ 1.32
CBWD3-207ENST00000611426 TTC8Q8TAM2 541 aa23.29■■□□□ 1.32
CBWD3-207ENST00000611426 ZNF507Q8TCN5 953 aa23.29■■□□□ 1.32
CBWD3-207ENST00000611426 C7orf25Q9BPX7 421 aa23.29■■□□□ 1.32
CBWD3-207ENST00000611426 SMG9Q9H0W8 520 aaKnown RBP23.29■■□□□ 1.32
CBWD3-207ENST00000611426 KIAA1586Q9HCI6 787 aa23.29■■□□□ 1.32
CBWD3-207ENST00000611426 GTF3C4Q9UKN8 822 aa23.29■■□□□ 1.32
CBWD3-207ENST00000611426 MAGED2Q9UNF1 606 aaPredicted RBP23.29■■□□□ 1.32
CBWD3-207ENST00000611426 CSH1P0DML2 217 aa23.28■■□□□ 1.32
CBWD3-207ENST00000611426 CSH2P0DML3 217 aa23.28■■□□□ 1.32
CBWD3-207ENST00000611426 HMGA1P17096 107 aaKnown RBP23.28■■□□□ 1.32
CBWD3-207ENST00000611426 CYP2F1P24903 491 aa23.28■■□□□ 1.32
CBWD3-207ENST00000611426 GPR15P49685 360 aa23.28■■□□□ 1.32
CBWD3-207ENST00000611426 RPL10AP62906 217 aaKnown RBP23.28■■□□□ 1.32
CBWD3-207ENST00000611426 PLCB2Q00722 1185 aa23.28■■□□□ 1.32
CBWD3-207ENST00000611426 PPP2R5DQ14738 602 aa23.28■■□□□ 1.32
CBWD3-207ENST00000611426 FAM26FQ5R3K3 315 aa23.28■■□□□ 1.32
CBWD3-207ENST00000611426 MAMSTRQ6ZN01 415 aa23.28■■□□□ 1.32
CBWD3-207ENST00000611426 EPM2AIP1Q7L775 607 aaPredicted RBP23.28■■□□□ 1.32
CBWD3-207ENST00000611426 OSTM1Q86WC4 334 aa23.28■■□□□ 1.32
CBWD3-207ENST00000611426 GRAMD1CQ8IYS0 662 aa23.28■■□□□ 1.32
CBWD3-207ENST00000611426 CMTM8Q8IZV2 173 aa23.28■■□□□ 1.32
CBWD3-207ENST00000611426 CELF5Q8N6W0 485 aaKnown RBP23.28■■□□□ 1.32
CBWD3-207ENST00000611426 OR5B17Q8NGF7 314 aa23.28■■□□□ 1.32
CBWD3-207ENST00000611426 SPATA18Q8TC71 538 aa23.28■■□□□ 1.32
CBWD3-207ENST00000611426 NELL1Q92832 810 aa23.28■■□□□ 1.32
CBWD3-207ENST00000611426 ABCB6Q9NP58 842 aa23.28■■□□□ 1.32
CBWD3-207ENST00000611426 THG1LQ9NWX6 298 aaKnown RBP23.28■■□□□ 1.32
CBWD3-207ENST00000611426 GTSE1Q9NYZ3 720 aa23.28■■□□□ 1.32
CBWD3-207ENST00000611426 PTPRJQ12913 1337 aa23.28■■□□□ 1.32
CBWD3-207ENST00000611426 OTOGLQ3ZCN5 2332 aa23.28■■□□□ 1.32
CBWD3-207ENST00000611426 SPECC1L-ADORA2AF8WAN1 911 aa23.27■■□□□ 1.32
CBWD3-207ENST00000611426 F11P03951 625 aa23.27■■□□□ 1.32
CBWD3-207ENST00000611426 AVPR1AP37288 418 aa23.27■■□□□ 1.32
CBWD3-207ENST00000611426 ID4P47928 161 aa23.27■■□□□ 1.32
CBWD3-207ENST00000611426 DDR2Q16832 855 aa23.27■■□□□ 1.32
CBWD3-207ENST00000611426 SOWAHAQ2M3V2 549 aa23.27■■□□□ 1.32
CBWD3-207ENST00000611426 SDHAF4Q5VUM1 108 aa23.27■■□□□ 1.32
CBWD3-207ENST00000611426 DPH6Q7L8W6 267 aa23.27■■□□□ 1.32
CBWD3-207ENST00000611426 TMEM150AQ86TG1 271 aa23.27■■□□□ 1.32
CBWD3-207ENST00000611426 RALGPS2Q86X27 583 aaPredicted RBP23.27■■□□□ 1.32
CBWD3-207ENST00000611426 KIAA2013Q8IYS2 634 aa23.27■■□□□ 1.32
CBWD3-207ENST00000611426 MAB21L3Q8N8X9 362 aa23.27■■□□□ 1.32
CBWD3-207ENST00000611426 RDH13Q8NBN7 331 aa23.27■■□□□ 1.32
CBWD3-207ENST00000611426 HPDLQ96IR7 371 aa23.27■■□□□ 1.32
CBWD3-207ENST00000611426 PDLIM2Q96JY6 352 aa23.27■■□□□ 1.32
CBWD3-207ENST00000611426 PPP1R9BQ96SB3 815 aa23.27■■□□□ 1.32
CBWD3-207ENST00000611426 FAM126AQ9BYI3 521 aaPredicted RBP23.27■■□□□ 1.32
CBWD3-207ENST00000611426 MYBPHLA2RUH7 354 aa23.27■■□□□ 1.31
CBWD3-207ENST00000611426 GABRDO14764 452 aa23.27■■□□□ 1.31
CBWD3-207ENST00000611426 IKBKBO14920 756 aa23.27■■□□□ 1.31
CBWD3-207ENST00000611426 BMP6P22004 513 aa23.27■■□□□ 1.31
CBWD3-207ENST00000611426 DDX6P26196 483 aaKnown RBP eCLIP23.27■■□□□ 1.31
CBWD3-207ENST00000611426 PCSK1P29120 753 aa23.27■■□□□ 1.31
CBWD3-207ENST00000611426 AFMP43652 599 aa23.27■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms