RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 PDGFBP01127 241 aaPredicted RBP13.62□□□□□ -0.23
CD9-212ENST00000610354 PTPN1P18031 435 aaKnown RBP13.62□□□□□ -0.23
CD9-212ENST00000610354 GTF2H1P32780 548 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 PPP1R2P41236 205 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 PIK3CAP42336 1068 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 CACNA2D1P54289 1103 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 STIM1Q13586 685 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 CFAP221Q4G0U5 840 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 CBWD6Q4V339 395 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 MDH1BQ5I0G3 518 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 CBWD3Q5JTY5 395 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 CBWD5Q5RIA9 395 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 STXBP5Q5T5C0 1151 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 CYP4A22Q5TCH4 519 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 FOXR2Q6PJQ5 311 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 HFE2Q6ZVN8 426 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 FILIP1Q7Z7B0 1213 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 TMEM150AQ86TG1 271 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 TRIML1Q8N9V2 468 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 TAF4BQ92750 862 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 SLC35C1Q96A29 364 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 CEP63Q96MT8 703 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 B3GNT5Q9BYG0 378 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 BCO2Q9BYV7 579 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 ABCB6Q9NP58 842 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 HMGXB4Q9UGU5 601 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 ZNF318Q5VUA4 2279 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 ZDBF2Q9HCK1 2354 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 A0A1W2PRU2 124 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 A8MXQ7 604 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 PRR33A8MZF0 331 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 BDNFP23560 247 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 MAGEA11P43364 429 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 FAM78AQ5JUQ0 283 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 IER5LQ5T953 404 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 KRT39Q6A163 491 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 TANGO2Q6ICL3 276 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 PAQR9Q6ZVX9 377 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 SPATA2LQ8IUW3 424 aaPredicted RBP13.61□□□□□ -0.23
CD9-212ENST00000610354 UBALD2Q8IYN6 164 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 LEMD2Q8NC56 503 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 MYCBPAPQ8TBZ2 947 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 TATDN2Q93075 761 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 NXPE3Q969Y0 559 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 PCED1BQ96HM7 432 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 FUBP3Q96I24 572 aaKnown RBP eCLIP13.61□□□□□ -0.23
CD9-212ENST00000610354 TWNKQ96RR1 684 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 KXD1Q9BQD3 176 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 GDE1Q9NZC3 331 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 MAGEC2Q9UBF1 373 aaPredicted RBP13.61□□□□□ -0.23
CD9-212ENST00000610354 RAPGEFL1Q9UHV5 662 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 DUSP12Q9UNI6 340 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 COQ4Q9Y3A0 265 aa13.61□□□□□ -0.23
CD9-212ENST00000610354 COL4A3Q01955 1670 aa13.6□□□□□ -0.23
CD9-212ENST00000610354 NUP210Q8TEM1 1887 aaPredicted RBP13.6□□□□□ -0.23
CD9-212ENST00000610354 SLC38A8A6NNN8 435 aa13.6□□□□□ -0.23
CD9-212ENST00000610354 CLDN5O00501 218 aa13.6□□□□□ -0.23
CD9-212ENST00000610354 F11P03951 625 aa13.6□□□□□ -0.23
CD9-212ENST00000610354 GABRR2P28476 465 aa13.6□□□□□ -0.23
CD9-212ENST00000610354 MXI1P50539 228 aa13.6□□□□□ -0.23
CD9-212ENST00000610354 NDST1P52848 882 aa13.6□□□□□ -0.23
CD9-212ENST00000610354 NOP14P78316 857 aaKnown RBP13.6□□□□□ -0.23
CD9-212ENST00000610354 CYP4F8P98187 520 aa13.6□□□□□ -0.23
CD9-212ENST00000610354 PAK1Q13153 545 aa13.6□□□□□ -0.23
CD9-212ENST00000610354 ORC1Q13415 861 aa13.6□□□□□ -0.23
CD9-212ENST00000610354 DCAF17Q5H9S7 520 aaPredicted RBP13.6□□□□□ -0.23
CD9-212ENST00000610354 TCERG1LQ5VWI1 586 aa13.6□□□□□ -0.23
CD9-212ENST00000610354 BMP8AQ7Z5Y6 402 aa13.6□□□□□ -0.23
CD9-212ENST00000610354 FRMD5Q7Z6J6 570 aa13.6□□□□□ -0.23
CD9-212ENST00000610354 FAM200AQ8TCP9 573 aa13.6□□□□□ -0.23
CD9-212ENST00000610354 WHAMMQ8TF30 809 aa13.6□□□□□ -0.23
CD9-212ENST00000610354 RSPRY1Q96DX4 576 aa13.6□□□□□ -0.23
CD9-212ENST00000610354 ASB16Q96NS5 453 aa13.6□□□□□ -0.23
CD9-212ENST00000610354 SRRTQ9BXP5 876 aaKnown RBP13.6□□□□□ -0.23
CD9-212ENST00000610354 ZNF518BQ9C0D4 1074 aa13.6□□□□□ -0.23
CD9-212ENST00000610354 ARMCX3Q9UH62 379 aaPredicted RBP13.6□□□□□ -0.23
CD9-212ENST00000610354 MYH10P35580 1976 aa13.59□□□□□ -0.23
CD9-212ENST00000610354 BICDL2A1A5D9 508 aa13.59□□□□□ -0.23
CD9-212ENST00000610354 TADA3O75528 432 aa13.59□□□□□ -0.23
CD9-212ENST00000610354 NOL4O94818 638 aa13.59□□□□□ -0.23
CD9-212ENST00000610354 VIPR2P41587 438 aa13.59□□□□□ -0.23
CD9-212ENST00000610354 RPL10AP62906 217 aaKnown RBP13.59□□□□□ -0.23
CD9-212ENST00000610354 GPC5P78333 572 aa13.59□□□□□ -0.23
CD9-212ENST00000610354 CYP27A1Q02318 531 aa13.59□□□□□ -0.23
CD9-212ENST00000610354 VEPH1Q14D04 833 aa13.59□□□□□ -0.23
CD9-212ENST00000610354 C4orf50Q6ZRC1 276 aa13.59□□□□□ -0.23
CD9-212ENST00000610354 MTSS1LQ765P7 747 aa13.59□□□□□ -0.23
CD9-212ENST00000610354 ACOT1Q86TX2 421 aa13.59□□□□□ -0.23
CD9-212ENST00000610354 ITIH5Q86UX2 942 aa13.59□□□□□ -0.23
CD9-212ENST00000610354 GPIHBP1Q8IV16 184 aa13.59□□□□□ -0.23
CD9-212ENST00000610354 TRIM59Q8IWR1 403 aa13.59□□□□□ -0.23
CD9-212ENST00000610354 SCN4BQ8IWT1 228 aa13.59□□□□□ -0.23
CD9-212ENST00000610354 CRYBG2Q8N1P7 616 aa13.59□□□□□ -0.23
CD9-212ENST00000610354 B3GALNT2Q8NCR0 500 aa13.59□□□□□ -0.23
CD9-212ENST00000610354 FBXL13Q8NEE6 735 aa13.59□□□□□ -0.23
CD9-212ENST00000610354 GBP4Q96PP9 640 aa13.59□□□□□ -0.23
CD9-212ENST00000610354 NUP62CLQ9H1M0 184 aa13.59□□□□□ -0.23
CD9-212ENST00000610354 RAB20Q9NX57 234 aa13.59□□□□□ -0.23
CD9-212ENST00000610354 KMT2EQ8IZD2 1858 aa13.58□□□□□ -0.23
CD9-212ENST00000610354 KRBA1A5PL33 1030 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms