RNA–Protein interactions for RNA: ENST00000607559.1

TPM2-208, Transcript of tropomyosin 2, human

TSL 2

Gene TPM2, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM2-208	ENST00000607559	ENPEP	Q07075	957 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	TEAD2	Q15562	447 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	INTS6L	Q5JSJ4	861 aa	Known RBP	11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	ASCL5	Q7RTU5	278 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	TMEM150A	Q86TG1	271 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	ARID3B	Q8IVW6	561 aa	Predicted RBP	11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	C1orf210	Q8IVY1	113 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	KIAA0895	Q8NCT3	520 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	PARD3B	Q8TEW8	1205 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	KBTBD7	Q8WVZ9	684 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	ZNF516	Q92618	1163 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	TRMT2B	Q96GJ1	504 aa	Known RBP	11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	MSANTD3	Q96H12	275 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	CGRRF1	Q99675	332 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	XYLT2	Q9H1B5	865 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	TASP1	Q9H6P5	420 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	SLC39A2	Q9NP94	309 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	LTB4R2	Q9NPC1	389 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	DDX43	Q9NXZ2	648 aa	Known RBP	11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	TRAF3IP3	Q9Y228	551 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	SNX9	Q9Y5X1	595 aa		11.5	□□□□□ -0.57
TPM2-208	ENST00000607559	MYH15	Q9Y2K3	1946 aa		11.49	□□□□□ -0.57
TPM2-208	ENST00000607559		A0A1W2PRU2	124 aa		11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	IKBKB	O14920	756 aa		11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	CLIC2	O15247	247 aa		11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	CSH1	P0DML2	217 aa		11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	CSH2	P0DML3	217 aa		11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	DDX6	P26196	483 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	RPL10A	P62906	217 aa	Known RBP	11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	VEPH1	Q14D04	833 aa		11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	MAPRE1	Q15691	268 aa	Known RBP	11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	ZNF528	Q3MIS6	628 aa		11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	KMT5B	Q4FZB7	885 aa		11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	C1orf228	Q6PIY5	440 aa		11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	ADGRD1	Q6QNK2	874 aa		11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	VSTM1	Q6UX27	236 aa		11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	ZNF852	Q6ZMS4	543 aa		11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	OSTM1	Q86WC4	334 aa		11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	MAML2	Q8IZL2	1156 aa	Predicted RBP	11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	NELL1	Q92832	810 aa		11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	RSPRY1	Q96DX4	576 aa		11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	LRRC3B	Q96PB8	259 aa		11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	BRD9	Q9H8M2	597 aa		11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	CDH9	Q9ULB4	789 aa		11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	MRPS17	Q9Y2R5	130 aa	Known RBP	11.49	□□□□□ -0.57
TPM2-208	ENST00000607559	FRYL	O94915	3013 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	FAM170B	A6NMN3	283 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	HEPACAM2	A8MVW5	462 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	NCAM2	O15394	837 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	SOAT2	O75908	522 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	NOL4	O94818	638 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	C4BPA	P04003	597 aa	Known RBP	11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	GJA1	P17302	382 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	LMO2	P25791	158 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	GABRR2	P28476	465 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	VIPR2	P41587	438 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	SYK	P43405	635 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	NDUFA8	P51970	172 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	NLRP12	P59046	1061 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	FOXK2	Q01167	660 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	DPYD	Q12882	1025 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	BFSP1	Q12934	665 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	KCNB1	Q14721	858 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	MGAT5B	Q3V5L5	792 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	ARHGAP15	Q53QZ3	475 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	NELFCD	Q8IXH7	590 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	GRAMD1C	Q8IYS0	662 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	ADGRF2	Q8IZF7	708 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	CMTM8	Q8IZV2	173 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	RDH13	Q8NBN7	331 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	PLEKHO2	Q8TD55	490 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	FAM84A	Q96KN4	292 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	SPATA17	Q96L03	361 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	FNBP1	Q96RU3	617 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	LPIN3	Q9BQK8	851 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	IER2	Q9BTL4	223 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	SLC46A2	Q9BY10	475 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	FOXQ1	Q9C009	403 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	ATXN3L	Q9H3M9	355 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	HEBP1	Q9NRV9	189 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	GTF3C4	Q9UKN8	822 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	FBXO4	Q9UKT5	387 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	MTF2	Q9Y483	593 aa	Predicted RBP	11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	NCAN	O14594	1321 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	TSC2	P49815	1807 aa		11.48	□□□□□ -0.57
TPM2-208	ENST00000607559	MYBPHL	A2RUH7	354 aa		11.47	□□□□□ -0.57
TPM2-208	ENST00000607559	ZNF263	O14978	683 aa		11.47	□□□□□ -0.57
TPM2-208	ENST00000607559	EXOC3	O60645	756 aa		11.47	□□□□□ -0.57
TPM2-208	ENST00000607559	KIF20A	O95235	890 aa		11.47	□□□□□ -0.57
TPM2-208	ENST00000607559	RPN1	P04843	607 aa	Known RBP	11.47	□□□□□ -0.57
TPM2-208	ENST00000607559	DCN	P07585	359 aa	Known RBP	11.47	□□□□□ -0.57
TPM2-208	ENST00000607559	KRT19	P08727	400 aa		11.47	□□□□□ -0.57
TPM2-208	ENST00000607559	TNNI1	P19237	187 aa		11.47	□□□□□ -0.57
TPM2-208	ENST00000607559	CYP2F1	P24903	491 aa		11.47	□□□□□ -0.57
TPM2-208	ENST00000607559	TARS	P26639	723 aa	Known RBP	11.47	□□□□□ -0.57
TPM2-208	ENST00000607559	GDI1	P31150	447 aa		11.47	□□□□□ -0.57
TPM2-208	ENST00000607559	CYP2J2	P51589	502 aa		11.47	□□□□□ -0.57
TPM2-208	ENST00000607559	MMRN1	Q13201	1228 aa		11.47	□□□□□ -0.57
TPM2-208	ENST00000607559	ZNF268	Q14587	947 aa	Predicted RBP	11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms