RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 PHLPP1O60346 1717 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 TULP4Q9NRJ4 1543 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 A0A1W2PQH9 124 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 RRP8O43159 456 aaKnown RBP7.5□□□□□ -1.21
TUBE1-207ENST00000604689 CUTAO60888 179 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 SRGAP2O75044 1071 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 IFNA14P01570 189 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 THEGLP0DJG4 465 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 SFTPCP11686 197 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 TYRP1P17643 537 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 HADHQ16836 314 aaKnown RBP7.5□□□□□ -1.21
TUBE1-207ENST00000604689 ARHGAP44Q17R89 818 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 SULT1C3Q6IMI6 304 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 CXorf57Q6NSI4 855 aaKnown RBP7.5□□□□□ -1.21
TUBE1-207ENST00000604689 MAP4K3Q8IVH8 894 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 NAXEQ8NCW5 288 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 PIK3C3Q8NEB9 887 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 SLC7A14Q8TBB6 771 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 PEX13Q92968 403 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 PPP2R3CQ969Q6 453 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 CAPZA3Q96KX2 299 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 UBXN10Q96LJ8 280 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 GAL3ST1Q99999 423 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 AIFM2Q9BRQ8 373 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 KCNQ5Q9NR82 932 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 AIPL1Q9NZN9 384 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 FBXO40Q9UH90 709 aa7.5□□□□□ -1.21
TUBE1-207ENST00000604689 SHANK3Q9BYB0 1731 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 FOXP2O15409 715 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 POLR2EP19388 210 aaKnown RBP7.49□□□□□ -1.21
TUBE1-207ENST00000604689 HTR2BP41595 481 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 CCT4P50991 539 aaKnown RBP7.49□□□□□ -1.21
TUBE1-207ENST00000604689 POLR2GP62487 172 aaKnown RBP eCLIP7.49□□□□□ -1.21
TUBE1-207ENST00000604689 LIPEQ05469 1076 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 AP3B2Q13367 1082 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 GPR158Q5T848 1215 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 AADACL4Q5VUY2 407 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 METTL21CQ5VZV1 264 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 TTBK2Q6IQ55 1244 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 AGMOQ6ZNB7 445 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 VSIG1Q86XK7 387 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 TMEM139Q8IV31 216 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 MYCBPAPQ8TBZ2 947 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 BCAS4Q8TDM0 211 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 DQX1Q8TE96 717 aaKnown RBP7.49□□□□□ -1.21
TUBE1-207ENST00000604689 VCPIP1Q96JH7 1222 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 GBP5Q96PP8 586 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 NAT10Q9H0A0 1025 aaKnown RBP7.49□□□□□ -1.21
TUBE1-207ENST00000604689 ATP13A1Q9HD20 1204 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 TRIM10Q9UDY6 481 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 L3MBTL1Q9Y468 752 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 LTBP3Q9NS15 1303 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 DDX3XO00571 662 aaKnown RBP eCLIP7.49□□□□□ -1.21
TUBE1-207ENST00000604689 SLC34A2O95436 690 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 SYF2O95926 243 aaKnown RBP7.49□□□□□ -1.21
TUBE1-207ENST00000604689 INHAP05111 366 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 HPGDP15428 266 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 LPOP22079 712 aaPredicted RBP7.49□□□□□ -1.21
TUBE1-207ENST00000604689 RPS6KB1P23443 525 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 GSTT1P30711 240 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 GNAQP50148 359 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 GRB10Q13322 594 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 PWP1Q13610 501 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 PPP2R5DQ14738 602 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 ANKRD20A4Q4UJ75 823 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 ZNF362Q5T0B9 420 aaPredicted RBP7.49□□□□□ -1.21
TUBE1-207ENST00000604689 ANKRD20A1Q5TYW2 823 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 IKBIPQ70UQ0 350 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 PDZD8Q8NEN9 1154 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 ZFAND2BQ8WV99 257 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 LPIN3Q9BQK8 851 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 PHF20Q9BVI0 1012 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 UNC93B1Q9H1C4 597 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 THAP9Q9H5L6 903 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 TRPC7Q9HCX4 862 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 DDX28Q9NUL7 540 aaKnown RBP7.49□□□□□ -1.21
TUBE1-207ENST00000604689 SRPK3Q9UPE1 567 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 TRIM33Q9UPN9 1127 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 PCDHB6Q9Y5E3 794 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 MAD1L1Q9Y6D9 718 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 SSH2Q76I76 1423 aa7.49□□□□□ -1.21
TUBE1-207ENST00000604689 NCF1BA6NI72 391 aaPredicted RBP7.48□□□□□ -1.21
TUBE1-207ENST00000604689 C16orf96A6NNT2 1141 aa7.48□□□□□ -1.21
TUBE1-207ENST00000604689 NCF1CA8MVU1 366 aaPredicted RBP7.48□□□□□ -1.21
TUBE1-207ENST00000604689 E9PMD0 336 aa7.48□□□□□ -1.21
TUBE1-207ENST00000604689 K7ENM7 598 aa7.48□□□□□ -1.21
TUBE1-207ENST00000604689 SMNDC1O75940 238 aaKnown RBP eCLIP7.48□□□□□ -1.21
TUBE1-207ENST00000604689 GLRX3O76003 335 aaKnown RBP7.48□□□□□ -1.21
TUBE1-207ENST00000604689 KRT16P08779 473 aa7.48□□□□□ -1.21
TUBE1-207ENST00000604689 GGCXP38435 758 aa7.48□□□□□ -1.21
TUBE1-207ENST00000604689 HDGFP51858 240 aaKnown RBP7.48□□□□□ -1.21
TUBE1-207ENST00000604689 ATXN3P54252 364 aaPredicted RBP7.48□□□□□ -1.21
TUBE1-207ENST00000604689 DMC1Q14565 340 aa7.48□□□□□ -1.21
TUBE1-207ENST00000604689 TIGD6Q17RP2 521 aa7.48□□□□□ -1.21
TUBE1-207ENST00000604689 PPP6R3Q5H9R7 873 aaPredicted RBP7.48□□□□□ -1.21
TUBE1-207ENST00000604689 PPP1R26Q5T8A7 1209 aaPredicted RBP7.48□□□□□ -1.21
TUBE1-207ENST00000604689 KIAA0319Q5VV43 1072 aa7.48□□□□□ -1.21
TUBE1-207ENST00000604689 ZNF704Q6ZNC4 412 aaPredicted RBP7.48□□□□□ -1.21
TUBE1-207ENST00000604689 KRT25Q7Z3Z0 450 aa7.48□□□□□ -1.21
TUBE1-207ENST00000604689 GALNTL5Q7Z4T8 443 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms