RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 DMAC2Q9NW81 257 aa19.38■□□□□ 0.69
CCDC12-208ENST00000603885 UXTQ9UBK9 157 aaPredicted RBP19.38■□□□□ 0.69
CCDC12-208ENST00000603885 PIAS3Q9Y6X2 628 aa19.38■□□□□ 0.69
CCDC12-208ENST00000603885 ARNTLO00327 626 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 ATP2C2O75185 946 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 TACC1O75410 805 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 PRAMEF12O95522 483 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 STAU1O95793 577 aaKnown RBP19.37■□□□□ 0.69
CCDC12-208ENST00000603885 F11P03951 625 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 NR3C1P04150 777 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 PDGFRBP09619 1106 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 FAM163BP0C2L3 166 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 PRR29P0C7W0 189 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 DDX6P26196 483 aaKnown RBP eCLIP19.37■□□□□ 0.691e-8■■■■■ 36.6
CCDC12-208ENST00000603885 ATICP31939 592 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 MAGEA11P43364 429 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 CASP4P49662 377 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 BIRC3Q13489 604 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 ARHGAP29Q52LW3 1261 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 TMEM150AQ86TG1 271 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 SCN4BQ8IWT1 228 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 STKLD1Q8NE28 680 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 PARD3BQ8TEW8 1205 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 NKD2Q969F2 451 aaPredicted RBP19.37■□□□□ 0.69
CCDC12-208ENST00000603885 MYLPFQ96A32 169 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 SYAP1Q96A49 352 aaPredicted RBP19.37■□□□□ 0.69
CCDC12-208ENST00000603885 CLDN23Q96B33 292 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 SLC46A2Q9BY10 475 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 GOLPH3LQ9H4A5 285 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 GDPD2Q9HCC8 539 aa19.37■□□□□ 0.69
CCDC12-208ENST00000603885 SPATA6Q9NWH7 488 aaPredicted RBP19.37■□□□□ 0.69
CCDC12-208ENST00000603885 MAGEC2Q9UBF1 373 aaPredicted RBP19.37■□□□□ 0.69
CCDC12-208ENST00000603885 SHISA7A6NL88 538 aa19.36■□□□□ 0.69
CCDC12-208ENST00000603885 SLC38A8A6NNN8 435 aa19.36■□□□□ 0.69
CCDC12-208ENST00000603885 LRRIQ3A6PVS8 624 aaPredicted RBP19.36■□□□□ 0.69
CCDC12-208ENST00000603885 SOBPA7XYQ1 873 aa19.36■□□□□ 0.69
CCDC12-208ENST00000603885 CALUO43852 315 aaPredicted RBP19.36■□□□□ 0.69
CCDC12-208ENST00000603885 NOL4O94818 638 aa19.36■□□□□ 0.69
CCDC12-208ENST00000603885 RHOBTB3O94955 611 aa19.36■□□□□ 0.69
CCDC12-208ENST00000603885 GNL1P36915 607 aaPredicted RBP19.36■□□□□ 0.69
CCDC12-208ENST00000603885 AVPR1AP37288 418 aa19.36■□□□□ 0.69
CCDC12-208ENST00000603885 RPS9P46781 194 aaKnown RBP19.36■□□□□ 0.69
CCDC12-208ENST00000603885 MLLT6P55198 1093 aaPredicted RBP19.36■□□□□ 0.69
CCDC12-208ENST00000603885 MYL6P60660 151 aa19.36■□□□□ 0.69
CCDC12-208ENST00000603885 DPYDQ12882 1025 aa19.36■□□□□ 0.69
CCDC12-208ENST00000603885 CMTM8Q8IZV2 173 aa19.36■□□□□ 0.69
CCDC12-208ENST00000603885 CELF5Q8N6W0 485 aaKnown RBP19.36■□□□□ 0.69
CCDC12-208ENST00000603885 OR6B3Q8NGW1 331 aa19.36■□□□□ 0.69
CCDC12-208ENST00000603885 PLEKHO2Q8TD55 490 aa19.36■□□□□ 0.69
CCDC12-208ENST00000603885 BPIFB1Q8TDL5 484 aa19.36■□□□□ 0.69
CCDC12-208ENST00000603885 FAM3CQ92520 227 aa19.36■□□□□ 0.69
CCDC12-208ENST00000603885 MRPS31Q92665 395 aaKnown RBP19.36■□□□□ 0.69
CCDC12-208ENST00000603885 TRMT2BQ96GJ1 504 aaKnown RBP19.36■□□□□ 0.69
CCDC12-208ENST00000603885 MSANTD3Q96H12 275 aa19.36■□□□□ 0.69
CCDC12-208ENST00000603885 CCDC34Q96HJ3 373 aa19.36■□□□□ 0.69
CCDC12-208ENST00000603885 MRPL45Q9BRJ2 306 aaKnown RBP19.36■□□□□ 0.69
CCDC12-208ENST00000603885 CRTAC1Q9NQ79 661 aa19.36■□□□□ 0.69
CCDC12-208ENST00000603885 NDRG2Q9UN36 371 aaKnown RBP19.36■□□□□ 0.69
CCDC12-208ENST00000603885 CACNA1IQ9P0X4 2223 aa19.36■□□□□ 0.69
CCDC12-208ENST00000603885 DMDP11532 3685 aa19.35■□□□□ 0.69
CCDC12-208ENST00000603885 PRR23AA6NEV1 266 aa19.35■□□□□ 0.69
CCDC12-208ENST00000603885 LAMTOR5O43504 91 aa19.35■□□□□ 0.69
CCDC12-208ENST00000603885 CLSTN1O94985 981 aa19.35■□□□□ 0.69
CCDC12-208ENST00000603885 ZNF202O95125 648 aa19.35■□□□□ 0.69
CCDC12-208ENST00000603885 CLDN10P78369 228 aa19.35■□□□□ 0.69
CCDC12-208ENST00000603885 PLCB2Q00722 1185 aa19.35■□□□□ 0.69
CCDC12-208ENST00000603885 CYP27A1Q02318 531 aa19.35■□□□□ 0.69
CCDC12-208ENST00000603885 TDRD10Q5VZ19 366 aaKnown RBP19.35■□□□□ 0.69
CCDC12-208ENST00000603885 C1orf228Q6PIY5 440 aa19.35■□□□□ 0.69
CCDC12-208ENST00000603885 VSTM1Q6UX27 236 aa19.35■□□□□ 0.69
CCDC12-208ENST00000603885 MAB21L3Q8N8X9 362 aa19.35■□□□□ 0.69
CCDC12-208ENST00000603885 MYCBPAPQ8TBZ2 947 aa19.35■□□□□ 0.69
CCDC12-208ENST00000603885 MYRFLQ96LU7 910 aa19.35■□□□□ 0.69
CCDC12-208ENST00000603885 LRRC3BQ96PB8 259 aa19.35■□□□□ 0.69
CCDC12-208ENST00000603885 SMG9Q9H0W8 520 aaKnown RBP19.35■□□□□ 0.69
CCDC12-208ENST00000603885 XYLT2Q9H1B5 865 aa19.35■□□□□ 0.69
CCDC12-208ENST00000603885 THG1LQ9NWX6 298 aaKnown RBP19.35■□□□□ 0.69
CCDC12-208ENST00000603885 NXF1Q9UBU9 619 aaKnown RBP19.35■□□□□ 0.69
CCDC12-208ENST00000603885 FRMD4BQ9Y2L6 1034 aa19.35■□□□□ 0.69
CCDC12-208ENST00000603885 DENND4CQ5VZ89 1909 aa19.35■□□□□ 0.69
CCDC12-208ENST00000603885 SP9P0CG40 484 aa19.34■□□□□ 0.69
CCDC12-208ENST00000603885 BDNFP23560 247 aa19.34■□□□□ 0.69
CCDC12-208ENST00000603885 KPNA1P52294 538 aaPredicted RBP19.34■□□□□ 0.69
CCDC12-208ENST00000603885 NUCB2P80303 420 aa19.34■□□□□ 0.69
CCDC12-208ENST00000603885 NCOA4Q13772 614 aa19.34■□□□□ 0.69
CCDC12-208ENST00000603885 ZNF699Q32M78 642 aa19.34■□□□□ 0.69
CCDC12-208ENST00000603885 MDH1BQ5I0G3 518 aa19.34■□□□□ 0.69
CCDC12-208ENST00000603885 CEP135Q66GS9 1140 aa19.34■□□□□ 0.69
CCDC12-208ENST00000603885 TXNDC8Q6A555 127 aa19.34■□□□□ 0.69
CCDC12-208ENST00000603885 ZC3H14Q6PJT7 736 aaKnown RBP19.34■□□□□ 0.69
CCDC12-208ENST00000603885 ASCL5Q7RTU5 278 aa19.34■□□□□ 0.69
CCDC12-208ENST00000603885 MON1AQ86VX9 555 aa19.34■□□□□ 0.69
CCDC12-208ENST00000603885 PCED1BQ96HM7 432 aa19.34■□□□□ 0.69
CCDC12-208ENST00000603885 CEP295NLQ96MC4 621 aa19.34■□□□□ 0.69
CCDC12-208ENST00000603885 C8orf33Q9H7E9 229 aaPredicted RBP19.34■□□□□ 0.69
CCDC12-208ENST00000603885 VRTNQ9H8Y1 702 aa19.34■□□□□ 0.69
CCDC12-208ENST00000603885 FBXO4Q9UKT5 387 aa19.34■□□□□ 0.69
CCDC12-208ENST00000603885 TRAF3IP3Q9Y228 551 aa19.34■□□□□ 0.69
CCDC12-208ENST00000603885 RIF1Q5UIP0 2472 aaKnown RBP19.34■□□□□ 0.69
CCDC12-208ENST00000603885 OBSL1O75147 1896 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms