RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 CLCNKBP51801 687 aa23.51■■□□□ 1.35
PPFIA3-211ENST00000602848 LRRC38Q5VT99 294 aa23.51■■□□□ 1.35
PPFIA3-211ENST00000602848 LLGL2Q6P1M3 1020 aa23.51■■□□□ 1.35
PPFIA3-211ENST00000602848 FBXO38Q6PIJ6 1188 aa23.51■■□□□ 1.35
PPFIA3-211ENST00000602848 ANKRD33Q7Z3H0 272 aa23.51■■□□□ 1.35
PPFIA3-211ENST00000602848 ZDHHC17Q8IUH5 632 aa23.51■■□□□ 1.35
PPFIA3-211ENST00000602848 RHOT1Q8IXI2 618 aa23.51■■□□□ 1.35
PPFIA3-211ENST00000602848 C12orf29Q8N999 325 aa23.51■■□□□ 1.35
PPFIA3-211ENST00000602848 UBA3Q8TBC4 463 aa23.51■■□□□ 1.35
PPFIA3-211ENST00000602848 KRT35Q92764 455 aa23.51■■□□□ 1.35
PPFIA3-211ENST00000602848 SMARCAL1Q9NZC9 954 aa23.51■■□□□ 1.35
PPFIA3-211ENST00000602848 PFKMP08237 780 aa23.51■■□□□ 1.35
PPFIA3-211ENST00000602848 AFF1P51825 1210 aaKnown RBP23.51■■□□□ 1.35
PPFIA3-211ENST00000602848 ACAP1Q15027 740 aa23.51■■□□□ 1.35
PPFIA3-211ENST00000602848 DSTYKQ6XUX3 929 aa23.51■■□□□ 1.35
PPFIA3-211ENST00000602848 SLC35F5Q8WV83 523 aa23.51■■□□□ 1.35
PPFIA3-211ENST00000602848 HNRNPLLQ8WVV9 542 aaKnown RBP23.51■■□□□ 1.35
PPFIA3-211ENST00000602848 SLC4A5Q9BY07 1137 aa23.51■■□□□ 1.35
PPFIA3-211ENST00000602848 TRIM7Q9C029 511 aa23.51■■□□□ 1.35
PPFIA3-211ENST00000602848 RNF216Q9NWF9 866 aaPredicted RBP23.51■■□□□ 1.35
PPFIA3-211ENST00000602848 KRIT1O00522 736 aa23.5■■□□□ 1.35
PPFIA3-211ENST00000602848 ERLIN1O75477 346 aa23.5■■□□□ 1.35
PPFIA3-211ENST00000602848 FGGP02679 453 aa23.5■■□□□ 1.35
PPFIA3-211ENST00000602848 ERBB2P04626 1255 aa23.5■■□□□ 1.35
PPFIA3-211ENST00000602848 BCAT1P54687 386 aa23.5■■□□□ 1.35
PPFIA3-211ENST00000602848 LONRF2Q1L5Z9 754 aa23.5■■□□□ 1.35
PPFIA3-211ENST00000602848 PLEKHG4Q58EX7 1191 aa23.5■■□□□ 1.35
PPFIA3-211ENST00000602848 CYP4A22Q5TCH4 519 aa23.5■■□□□ 1.35
PPFIA3-211ENST00000602848 C1orf53Q5VUE5 145 aa23.5■■□□□ 1.35
PPFIA3-211ENST00000602848 DCLRE1AQ6PJP8 1040 aa23.5■■□□□ 1.35
PPFIA3-211ENST00000602848 TMEM110Q86TL2 294 aa23.5■■□□□ 1.35
PPFIA3-211ENST00000602848 URGCPQ8TCY9 931 aa23.5■■□□□ 1.35
PPFIA3-211ENST00000602848 SEPT8Q92599 483 aa23.5■■□□□ 1.35
PPFIA3-211ENST00000602848 TOX2Q96NM4 488 aa23.5■■□□□ 1.35
PPFIA3-211ENST00000602848 HNRNPABQ99729 332 aaKnown RBP23.5■■□□□ 1.35
PPFIA3-211ENST00000602848 TMEM161AQ9NX61 479 aa23.5■■□□□ 1.35
PPFIA3-211ENST00000602848 DSEQ9UL01 958 aa23.5■■□□□ 1.35
PPFIA3-211ENST00000602848 GOLGA6L10A0A0M3HER8 536 aa23.49■■□□□ 1.35
PPFIA3-211ENST00000602848 PDGFRBP09619 1106 aa23.49■■□□□ 1.35
PPFIA3-211ENST00000602848 LMO2P25791 158 aa23.49■■□□□ 1.35
PPFIA3-211ENST00000602848 RPL34P49207 117 aaKnown RBP23.49■■□□□ 1.35
PPFIA3-211ENST00000602848 RPL7AP62424 266 aaKnown RBP23.49■■□□□ 1.35
PPFIA3-211ENST00000602848 BST2Q10589 180 aaKnown RBP23.49■■□□□ 1.35
PPFIA3-211ENST00000602848 WSCD1Q658N2 575 aa23.49■■□□□ 1.35
PPFIA3-211ENST00000602848 C8orf74Q6P047 294 aa23.49■■□□□ 1.35
PPFIA3-211ENST00000602848 TTC30AQ86WT1 665 aa23.49■■□□□ 1.35
PPFIA3-211ENST00000602848 RSPH1Q8WYR4 309 aa23.49■■□□□ 1.35
PPFIA3-211ENST00000602848 MCEEQ96PE7 176 aa23.49■■□□□ 1.35
PPFIA3-211ENST00000602848 EPC1Q9H2F5 836 aa23.49■■□□□ 1.35
PPFIA3-211ENST00000602848 DPEP3Q9H4B8 488 aa23.49■■□□□ 1.35
PPFIA3-211ENST00000602848 POMCP01189 267 aa23.48■■□□□ 1.35
PPFIA3-211ENST00000602848 ACADSBP45954 432 aa23.48■■□□□ 1.35
PPFIA3-211ENST00000602848 RNASE9P60153 205 aaKnown RBP23.48■■□□□ 1.35
PPFIA3-211ENST00000602848 SLC39A5Q6ZMH5 540 aa23.48■■□□□ 1.35
PPFIA3-211ENST00000602848 OSTM1Q86WC4 334 aa23.48■■□□□ 1.35
PPFIA3-211ENST00000602848 B3GALNT2Q8NCR0 500 aa23.48■■□□□ 1.35
PPFIA3-211ENST00000602848 MAIP1Q8WWC4 291 aa23.48■■□□□ 1.35
PPFIA3-211ENST00000602848 SLITRK6Q9H5Y7 841 aa23.48■■□□□ 1.35
PPFIA3-211ENST00000602848 FAM49BQ9NUQ9 324 aa23.48■■□□□ 1.35
PPFIA3-211ENST00000602848 CASTOR2A6NHX0 329 aa23.48■■□□□ 1.35
PPFIA3-211ENST00000602848 CYP11A1P05108 521 aa23.48■■□□□ 1.35
PPFIA3-211ENST00000602848 ODC1P11926 461 aa23.48■■□□□ 1.35
PPFIA3-211ENST00000602848 PTPN1P18031 435 aaKnown RBP23.48■■□□□ 1.35
PPFIA3-211ENST00000602848 SCNN1AP37088 669 aa23.48■■□□□ 1.35
PPFIA3-211ENST00000602848 METTL23Q86XA0 190 aa23.48■■□□□ 1.35
PPFIA3-211ENST00000602848 KATNAL2Q8IYT4 538 aa23.48■■□□□ 1.35
PPFIA3-211ENST00000602848 LINC01599Q8WXQ3 324 aa23.48■■□□□ 1.35
PPFIA3-211ENST00000602848 HSFY1Q96LI6 401 aa23.48■■□□□ 1.35
PPFIA3-211ENST00000602848 PNKPQ96T60 521 aa23.48■■□□□ 1.35
PPFIA3-211ENST00000602848 LRRC1Q9BTT6 524 aa23.48■■□□□ 1.35
PPFIA3-211ENST00000602848 DCDC2CA8MYV0 355 aa23.47■■□□□ 1.35
PPFIA3-211ENST00000602848 GOLGA8SH3BPF8 625 aa23.47■■□□□ 1.35
PPFIA3-211ENST00000602848 M0QZQ0 153 aa23.47■■□□□ 1.35
PPFIA3-211ENST00000602848 NBNO60934 754 aa23.47■■□□□ 1.35
PPFIA3-211ENST00000602848 PYGMP11217 842 aa23.47■■□□□ 1.35
PPFIA3-211ENST00000602848 CAPN2P17655 700 aa23.47■■□□□ 1.35
PPFIA3-211ENST00000602848 PCSK1P29120 753 aa23.47■■□□□ 1.35
PPFIA3-211ENST00000602848 RFC1P35251 1148 aaPredicted RBP23.47■■□□□ 1.35
PPFIA3-211ENST00000602848 MARCKSL1P49006 195 aa23.47■■□□□ 1.35
PPFIA3-211ENST00000602848 CLCN6P51797 869 aa23.47■■□□□ 1.35
PPFIA3-211ENST00000602848 SLC8A3P57103 927 aa23.47■■□□□ 1.35
PPFIA3-211ENST00000602848 NOMO2Q5JPE7 1267 aa23.47■■□□□ 1.35
PPFIA3-211ENST00000602848 CC2D1AQ6P1N0 951 aaPredicted RBP23.47■■□□□ 1.35
PPFIA3-211ENST00000602848 TMCO3Q6UWJ1 677 aa23.47■■□□□ 1.35
PPFIA3-211ENST00000602848 ST7Q9NRC1 585 aa23.47■■□□□ 1.35
PPFIA3-211ENST00000602848 CDH9Q9ULB4 789 aa23.47■■□□□ 1.35
PPFIA3-211ENST00000602848 MTUS1Q9ULD2 1270 aa23.47■■□□□ 1.35
PPFIA3-211ENST00000602848 INPP5FQ9Y2H2 1132 aa23.47■■□□□ 1.35
PPFIA3-211ENST00000602848 ENPP3O14638 875 aa23.46■■□□□ 1.35
PPFIA3-211ENST00000602848 CETN2P41208 172 aa23.46■■□□□ 1.35
PPFIA3-211ENST00000602848 RBM10P98175 930 aaKnown RBP23.46■■□□□ 1.35
PPFIA3-211ENST00000602848 PDE4CQ08493 712 aa23.46■■□□□ 1.35
PPFIA3-211ENST00000602848 ZNF211Q13398 564 aaPredicted RBP23.46■■□□□ 1.35
PPFIA3-211ENST00000602848 SLC13A5Q86YT5 568 aaPredicted RBP23.46■■□□□ 1.35
PPFIA3-211ENST00000602848 EXD1Q8NHP7 514 aa23.46■■□□□ 1.35
PPFIA3-211ENST00000602848 KRT12Q99456 494 aa23.46■■□□□ 1.35
PPFIA3-211ENST00000602848 NCAPGQ9BPX3 1015 aa23.46■■□□□ 1.35
PPFIA3-211ENST00000602848 DDX43Q9NXZ2 648 aaKnown RBP23.46■■□□□ 1.35
PPFIA3-211ENST00000602848 TDRD15B5MCY1 1934 aaKnown RBP23.46■■□□□ 1.35
PPFIA3-211ENST00000602848 B3GAT3O94766 335 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms