RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 IL23AQ9NPF7 189 aa19.03■□□□□ 0.64
VRK3-225ENST00000601912 ST7Q9NRC1 585 aa19.03■□□□□ 0.64
VRK3-225ENST00000601912 CYTH4Q9UIA0 394 aa19.03■□□□□ 0.64
VRK3-225ENST00000601912 CDC23Q9UJX2 597 aa19.03■□□□□ 0.64
VRK3-225ENST00000601912 AMFRQ9UKV5 643 aa19.03■□□□□ 0.64
VRK3-225ENST00000601912 MRFAP1Q9Y605 127 aa19.03■□□□□ 0.64
VRK3-225ENST00000601912 F8W810 466 aa19.02■□□□□ 0.64
VRK3-225ENST00000601912 ATP2C2O75185 946 aa19.02■□□□□ 0.64
VRK3-225ENST00000601912 PRLRP16471 622 aa19.02■□□□□ 0.64
VRK3-225ENST00000601912 AMPD2Q01433 879 aa19.02■□□□□ 0.64
VRK3-225ENST00000601912 TAP1Q03518 808 aa19.02■□□□□ 0.64
VRK3-225ENST00000601912 YWHAHQ04917 246 aaPredicted RBP19.02■□□□□ 0.64
VRK3-225ENST00000601912 BST2Q10589 180 aaKnown RBP19.02■□□□□ 0.64
VRK3-225ENST00000601912 DNAJC24Q6P3W2 148 aa19.02■□□□□ 0.64
VRK3-225ENST00000601912 TTC30AQ86WT1 665 aa19.02■□□□□ 0.64
VRK3-225ENST00000601912 STK32AQ8WU08 396 aa19.02■□□□□ 0.64
VRK3-225ENST00000601912 CPXM1Q96SM3 734 aa19.02■□□□□ 0.64
VRK3-225ENST00000601912 LPIN3Q9BQK8 851 aa19.02■□□□□ 0.64
VRK3-225ENST00000601912 ANAPC7Q9UJX3 599 aa19.02■□□□□ 0.64
VRK3-225ENST00000601912 ADAM28Q9UKQ2 775 aa19.02■□□□□ 0.64
VRK3-225ENST00000601912 SNX12Q9UMY4 172 aa19.02■□□□□ 0.64
VRK3-225ENST00000601912 HYOU1Q9Y4L1 999 aa19.02■□□□□ 0.64
VRK3-225ENST00000601912 MYO1FO00160 1098 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 RIOK3O14730 519 aaKnown RBP19.01■□□□□ 0.63
VRK3-225ENST00000601912 ACRP10323 421 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 TCP1P17987 556 aaKnown RBP19.01■□□□□ 0.63
VRK3-225ENST00000601912 GABRB2P47870 512 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 SLC11A1P49279 550 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 PPIGQ13427 754 aaKnown RBP eCLIP19.01■□□□□ 0.633e-6■■■■□ 22
VRK3-225ENST00000601912 ZNF268Q14587 947 aaPredicted RBP19.01■□□□□ 0.63
VRK3-225ENST00000601912 MESDQ14696 234 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 RPS6KA1Q15418 735 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 MDH1BQ5I0G3 518 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 CYP4A22Q5TCH4 519 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 C3orf20Q8ND61 904 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 MED10Q9BTT4 135 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 TLR10Q9BXR5 811 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 GOLPH3Q9H4A6 298 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 LCMT1Q9UIC8 334 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 SYN3O14994 580 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 NCK2O43639 380 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 GALTP07902 379 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 GSCP56915 257 aaPredicted RBP19.01■□□□□ 0.63
VRK3-225ENST00000601912 WDR5P61964 334 aaKnown RBP19.01■□□□□ 0.63
VRK3-225ENST00000601912 TSPY1Q01534 308 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 PLCB3Q01970 1234 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 PDE4CQ08493 712 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 ELAVL2Q12926 359 aaKnown RBP19.01■□□□□ 0.63
VRK3-225ENST00000601912 NT5DC3Q86UY8 548 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 FEZF2Q8TBJ5 459 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 MYCBPAPQ8TBZ2 947 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 SLC35F5Q8WV83 523 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 SELENOOQ9BVL4 669 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 ABCB6Q9NP58 842 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 CRTAC1Q9NQ79 661 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 ALG6Q9Y672 507 aa19.01■□□□□ 0.63
VRK3-225ENST00000601912 SF3B1O75533 1304 aaKnown RBP eCLIP19■□□□□ 0.633e-6■■■■■ 137.9
VRK3-225ENST00000601912 TMEM110-MUSTN1A8MSY1 372 aa19■□□□□ 0.63
VRK3-225ENST00000601912 ALDH7A1P49419 539 aaKnown RBP19■□□□□ 0.63
VRK3-225ENST00000601912 MAPRE1Q15691 268 aaKnown RBP19■□□□□ 0.63
VRK3-225ENST00000601912 WHAMMP3Q1A5X7 153 aa19■□□□□ 0.63
VRK3-225ENST00000601912 INTS6LQ5JSJ4 861 aaKnown RBP19■□□□□ 0.63
VRK3-225ENST00000601912 KIAA0319Q5VV43 1072 aa19■□□□□ 0.63
VRK3-225ENST00000601912 LLGL2Q6P1M3 1020 aa19■□□□□ 0.63
VRK3-225ENST00000601912 DCUN1D2Q6PH85 259 aa19■□□□□ 0.63
VRK3-225ENST00000601912 FUKQ8N0W3 1084 aa19■□□□□ 0.63
VRK3-225ENST00000601912 DUSP16Q9BY84 665 aa19■□□□□ 0.63
VRK3-225ENST00000601912 MYBPHLA2RUH7 354 aa18.99■□□□□ 0.63
VRK3-225ENST00000601912 ERBB2P04626 1255 aa18.99■□□□□ 0.63
VRK3-225ENST00000601912 PMF1Q6P1K2 205 aa18.99■□□□□ 0.63
VRK3-225ENST00000601912 XYLT1Q86Y38 959 aa18.99■□□□□ 0.63
VRK3-225ENST00000601912 OSBPL9Q96SU4 736 aa18.99■□□□□ 0.63
VRK3-225ENST00000601912 RTP3Q9BQQ7 232 aa18.99■□□□□ 0.63
VRK3-225ENST00000601912 SLC4A5Q9BY07 1137 aa18.99■□□□□ 0.63
VRK3-225ENST00000601912 CYLDQ9NQC7 956 aa18.99■□□□□ 0.63
VRK3-225ENST00000601912 PACSIN2Q9UNF0 486 aaPredicted RBP18.99■□□□□ 0.63
VRK3-225ENST00000601912 FNDC1Q4ZHG4 1894 aaPredicted RBP18.99■□□□□ 0.63
VRK3-225ENST00000601912 LTBP2Q14767 1821 aa18.99■□□□□ 0.63
VRK3-225ENST00000601912 TCRBV5S1A1TA0A578 114 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 SIGLEC16A6NMB1 481 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 OAZ2O95190 189 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 FGBP02675 491 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 FAM200BP0CF97 657 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 KRT3P12035 628 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 NPR3P17342 541 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 TKTP29401 623 aaKnown RBP18.98■□□□□ 0.63
VRK3-225ENST00000601912 SLC1A1P43005 524 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 ACADSBP45954 432 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 RGS7P49802 495 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 BCAR1P56945 870 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 DEFB103AP81534 67 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 FPGSQ05932 587 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 FAM171A1Q5VUB5 890 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 FAM171BQ6P995 826 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 OTOP2Q7RTS6 562 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 TMEM110Q86TL2 294 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 PCED1BQ96HM7 432 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 BTBD6Q96KE9 485 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 HSFY1Q96LI6 401 aa18.98■□□□□ 0.63
VRK3-225ENST00000601912 B3GNT5Q9BYG0 378 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms