RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 GNL1P36915 607 aaPredicted RBP12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 GLUD2P49448 558 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 POLR2FP61218 127 aaKnown RBP12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 CREMQ03060 361 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 TBX2Q13207 712 aaPredicted RBP12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 DRAP1Q14919 205 aaPredicted RBP12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 RTP2Q5QGT7 225 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 OVOS1Q6IE37 1185 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 ZNF280DQ6N043 979 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 RRAGAQ7L523 313 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 FAM71AQ8IYT1 594 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 VPS52Q8N1B4 723 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 CRYBG2Q8N1P7 616 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 THEM5Q8N1Q8 247 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 LNX1Q8TBB1 728 aaPredicted RBP12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 BAP1Q92560 729 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 SYN2Q92777 582 aaPredicted RBP12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 PCMTD1Q96MG8 357 aaPredicted RBP12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 ARID3AQ99856 593 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 RTP3Q9BQQ7 232 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 MRPL45Q9BRJ2 306 aaKnown RBP12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 GPR88Q9GZN0 384 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 RXFP1Q9HBX9 757 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 FNIP2Q9P278 1114 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 MTRRQ9UBK8 725 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 KIAA1257Q9ULG3 409 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 CAPN11Q9UMQ6 739 aa12.41□□□□□ -0.42
CHMP2A-207ENST00000600804 C2orf71A6NGG8 1288 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 F8VZ95 297 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 I3L4J1 428 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 GALR2O43603 387 aaPredicted RBP12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 CLASP2O75122 1294 aaKnown RBP12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 GYPCP04921 128 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 URODP06132 367 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 ASGR2P07307 311 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 PAEPP09466 180 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 ZBED6P86452 979 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 APBA1Q02410 837 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 SMARCB1Q12824 385 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 SLC8B1Q6J4K2 584 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 GJB7Q6PEY0 223 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 SCARA5Q6ZMJ2 495 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 TAS1R1Q7RTX1 841 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 OSTM1Q86WC4 334 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 C12orf76Q8N812 135 aaPredicted RBP12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 WHAMMQ8TF30 809 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 KAT5Q92993 513 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 ELMO3Q96BJ8 720 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 NT5C1AQ9BXI3 368 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 SNX25Q9H3E2 840 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 AIPL1Q9NZN9 384 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 IMPACTQ9P2X3 320 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 AJAP1Q9UKB5 411 aaPredicted RBP12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 CDH9Q9ULB4 789 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 PTPRDP23468 1912 aa12.4□□□□□ -0.42
CHMP2A-207ENST00000600804 CEP250Q9BV73 2442 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 MIA3Q5JRA6 1907 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 PRR23AA6NEV1 266 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 FOXN3O00409 490 aaPredicted RBP12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 TPM1P09493 284 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 CCDC172P0C7W6 258 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 HNRNPH3P31942 346 aaKnown RBP12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 SOX5P35711 763 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 STAT1P42224 750 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 RAP1GAPP47736 663 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 RAD23BP54727 409 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 CDH8P55286 799 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 BPIFB4P59827 614 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 PTPN14Q15678 1187 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 MAPRE1Q15691 268 aaKnown RBP12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 MEA1Q16626 185 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 KIAA1841Q6NSI8 718 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 FAM171BQ6P995 826 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 CACNA2D4Q7Z3S7 1137 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 MRPL43Q8N983 215 aaKnown RBP12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 ZNF397Q8NF99 534 aaPredicted RBP12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 OR6B3Q8NGW1 331 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 AUTS2Q8WXX7 1259 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 RIN2Q8WYP3 895 aaPredicted RBP12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 TNIP3Q96KP6 325 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 SPAG5Q96R06 1193 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 PKMYT1Q99640 499 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 ADAM7Q9H2U9 754 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 MRPL17Q9NRX2 175 aaKnown RBP12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 DDX43Q9NXZ2 648 aaKnown RBP12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 MAFFQ9ULX9 164 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 SORCS3Q9UPU3 1222 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 LUC7L2Q9Y383 392 aaKnown RBP12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 NME7Q9Y5B8 376 aa12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 TIMM13Q9Y5L4 95 aaPredicted RBP12.39□□□□□ -0.43
CHMP2A-207ENST00000600804 COL4A3Q01955 1670 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 OTOGLQ3ZCN5 2332 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 A8MXQ7 604 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 CLSTN1O94985 981 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 EPCAMP16422 314 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 HOXB8P17481 243 aaPredicted RBP12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 NBL1P41271 181 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 PRKCIP41743 596 aa12.38□□□□□ -0.43
CHMP2A-207ENST00000600804 NDST1P52848 882 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms