RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 MYCBPAPQ8TBZ2 947 aa16.82■□□□□ 0.28
RPS28-203ENST00000600659 GIPC2Q8TF65 315 aa16.82■□□□□ 0.28
RPS28-203ENST00000600659 ZSWIM3Q96MP5 696 aa16.82■□□□□ 0.28
RPS28-203ENST00000600659 GBP4Q96PP9 640 aa16.82■□□□□ 0.28
RPS28-203ENST00000600659 TWNKQ96RR1 684 aa16.82■□□□□ 0.28
RPS28-203ENST00000600659 DUSP12Q9UNI6 340 aa16.82■□□□□ 0.28
RPS28-203ENST00000600659 COQ4Q9Y3A0 265 aa16.82■□□□□ 0.28
RPS28-203ENST00000600659 A0A1W2PRU2 124 aa16.81■□□□□ 0.28
RPS28-203ENST00000600659 A8MXQ7 604 aa16.81■□□□□ 0.28
RPS28-203ENST00000600659 TADA3O75528 432 aa16.81■□□□□ 0.28
RPS28-203ENST00000600659 MYL4P12829 197 aa16.81■□□□□ 0.28
RPS28-203ENST00000600659 MAGEA11P43364 429 aa16.81■□□□□ 0.28
RPS28-203ENST00000600659 MARSP56192 900 aaKnown RBP16.81■□□□□ 0.28
RPS28-203ENST00000600659 INCA1Q0VD86 236 aa16.81■□□□□ 0.28
RPS28-203ENST00000600659 TDGQ13569 410 aa16.81■□□□□ 0.28
RPS28-203ENST00000600659 TEAD2Q15562 447 aa16.81■□□□□ 0.28
RPS28-203ENST00000600659 DDR2Q16832 855 aa16.81■□□□□ 0.28
RPS28-203ENST00000600659 MDH1BQ5I0G3 518 aa16.81■□□□□ 0.28
RPS28-203ENST00000600659 STXBP5Q5T5C0 1151 aa16.81■□□□□ 0.28
RPS28-203ENST00000600659 RBM43Q6ZSC3 357 aaKnown RBP16.81■□□□□ 0.28
RPS28-203ENST00000600659 PAQR9Q6ZVX9 377 aa16.81■□□□□ 0.28
RPS28-203ENST00000600659 FRMD5Q7Z6J6 570 aa16.81■□□□□ 0.28
RPS28-203ENST00000600659 SLC44A3Q8N4M1 653 aa16.81■□□□□ 0.28
RPS28-203ENST00000600659 WHAMMQ8TF30 809 aa16.81■□□□□ 0.28
RPS28-203ENST00000600659 NXPE3Q969Y0 559 aa16.81■□□□□ 0.28
RPS28-203ENST00000600659 MCRS1Q96EZ8 462 aa16.81■□□□□ 0.28
RPS28-203ENST00000600659 NUP62CLQ9H1M0 184 aa16.81■□□□□ 0.28
RPS28-203ENST00000600659 SNX25Q9H3E2 840 aa16.81■□□□□ 0.28
RPS28-203ENST00000600659 GDE1Q9NZC3 331 aa16.81■□□□□ 0.28
RPS28-203ENST00000600659 ARMCX3Q9UH62 379 aaPredicted RBP16.81■□□□□ 0.28
RPS28-203ENST00000600659 BICDL2A1A5D9 508 aa16.8■□□□□ 0.28
RPS28-203ENST00000600659 ZNF197O14709 1029 aa16.8■□□□□ 0.28
RPS28-203ENST00000600659 NOL4O94818 638 aa16.8■□□□□ 0.28
RPS28-203ENST00000600659 PTPN1P18031 435 aaKnown RBP16.8■□□□□ 0.28
RPS28-203ENST00000600659 DPCR1Q3MIW9 517 aa16.8■□□□□ 0.28
RPS28-203ENST00000600659 DCAF17Q5H9S7 520 aaPredicted RBP16.8■□□□□ 0.28
RPS28-203ENST00000600659 TMEM31Q5JXX7 168 aa16.8■□□□□ 0.28
RPS28-203ENST00000600659 CYP4A22Q5TCH4 519 aa16.8■□□□□ 0.28
RPS28-203ENST00000600659 HFE2Q6ZVN8 426 aa16.8■□□□□ 0.28
RPS28-203ENST00000600659 SPATA2LQ8IUW3 424 aaPredicted RBP16.8■□□□□ 0.28
RPS28-203ENST00000600659 TRIM59Q8IWR1 403 aa16.8■□□□□ 0.28
RPS28-203ENST00000600659 UBALD2Q8IYN6 164 aa16.8■□□□□ 0.28
RPS28-203ENST00000600659 FBXL13Q8NEE6 735 aa16.8■□□□□ 0.28
RPS28-203ENST00000600659 ASB16Q96NS5 453 aa16.8■□□□□ 0.28
RPS28-203ENST00000600659 B3GNT5Q9BYG0 378 aa16.8■□□□□ 0.28
RPS28-203ENST00000600659 PLA2G2FQ9BZM2 168 aa16.8■□□□□ 0.28
RPS28-203ENST00000600659 NIF3L1Q9GZT8 377 aa16.8■□□□□ 0.28
RPS28-203ENST00000600659 RAB20Q9NX57 234 aa16.8■□□□□ 0.28
RPS28-203ENST00000600659 HELZP42694 1942 aaKnown RBP16.8■□□□□ 0.28
RPS28-203ENST00000600659 TMEM221A6NGB7 291 aa16.79■□□□□ 0.28
RPS28-203ENST00000600659 PRR33A8MZF0 331 aa16.79■□□□□ 0.28
RPS28-203ENST00000600659 M0R296 226 aa16.79■□□□□ 0.28
RPS28-203ENST00000600659 F11P03951 625 aa16.79■□□□□ 0.28
RPS28-203ENST00000600659 BDNFP23560 247 aa16.79■□□□□ 0.28
RPS28-203ENST00000600659 GABRR2P28476 465 aa16.79■□□□□ 0.28
RPS28-203ENST00000600659 NDST1P52848 882 aa16.79■□□□□ 0.28
RPS28-203ENST00000600659 ORC1Q13415 861 aa16.79■□□□□ 0.28
RPS28-203ENST00000600659 MAPRE1Q15691 268 aaKnown RBP16.79■□□□□ 0.28
RPS28-203ENST00000600659 FAM78AQ5JUQ0 283 aa16.79■□□□□ 0.28
RPS28-203ENST00000600659 TCERG1LQ5VWI1 586 aa16.79■□□□□ 0.28
RPS28-203ENST00000600659 C4orf50Q6ZRC1 276 aa16.79■□□□□ 0.28
RPS28-203ENST00000600659 ITIH5Q86UX2 942 aa16.79■□□□□ 0.28
RPS28-203ENST00000600659 KXD1Q9BQD3 176 aa16.79■□□□□ 0.28
RPS28-203ENST00000600659 ZNF518BQ9C0D4 1074 aa16.79■□□□□ 0.28
RPS28-203ENST00000600659 METTL14Q9HCE5 456 aaKnown RBP16.79■□□□□ 0.28
RPS28-203ENST00000600659 MAGEC2Q9UBF1 373 aaPredicted RBP16.79■□□□□ 0.28
RPS28-203ENST00000600659 RWDD2AQ9UIY3 292 aa16.79■□□□□ 0.28
RPS28-203ENST00000600659 TICRRQ7Z2Z1 1910 aa16.79■□□□□ 0.28
RPS28-203ENST00000600659 CLDN5O00501 218 aa16.78■□□□□ 0.28
RPS28-203ENST00000600659 PMM2O15305 246 aa16.78■□□□□ 0.28
RPS28-203ENST00000600659 PDGFBP01127 241 aaPredicted RBP16.78■□□□□ 0.28
RPS28-203ENST00000600659 FMO5P49326 533 aa16.78■□□□□ 0.28
RPS28-203ENST00000600659 CYP4F8P98187 520 aa16.78■□□□□ 0.28
RPS28-203ENST00000600659 CYP27A1Q02318 531 aa16.78■□□□□ 0.28
RPS28-203ENST00000600659 VEPH1Q14D04 833 aa16.78■□□□□ 0.28
RPS28-203ENST00000600659 IER5LQ5T953 404 aa16.78■□□□□ 0.28
RPS28-203ENST00000600659 TANGO2Q6ICL3 276 aa16.78■□□□□ 0.28
RPS28-203ENST00000600659 VSTM1Q6UX27 236 aa16.78■□□□□ 0.28
RPS28-203ENST00000600659 MTSS1LQ765P7 747 aa16.78■□□□□ 0.28
RPS28-203ENST00000600659 BMP8AQ7Z5Y6 402 aa16.78■□□□□ 0.28
RPS28-203ENST00000600659 IRF2BP1Q8IU81 584 aa16.78■□□□□ 0.28
RPS28-203ENST00000600659 CRYBG2Q8N1P7 616 aa16.78■□□□□ 0.28
RPS28-203ENST00000600659 LMO3Q8TAP4 145 aa16.78■□□□□ 0.28
RPS28-203ENST00000600659 TATDN2Q93075 761 aa16.78■□□□□ 0.28
RPS28-203ENST00000600659 RSPRY1Q96DX4 576 aa16.78■□□□□ 0.28
RPS28-203ENST00000600659 MYRFLQ96LU7 910 aa16.78■□□□□ 0.28
RPS28-203ENST00000600659 ARID3AQ99856 593 aa16.78■□□□□ 0.28
RPS28-203ENST00000600659 SRRTQ9BXP5 876 aaKnown RBP16.78■□□□□ 0.28
RPS28-203ENST00000600659 TRPV4Q9HBA0 871 aa16.78■□□□□ 0.28
RPS28-203ENST00000600659 MYO16Q9Y6X6 1858 aa16.78■□□□□ 0.28
RPS28-203ENST00000600659 SLC38A8A6NNN8 435 aa16.77■□□□□ 0.28
RPS28-203ENST00000600659 STX10O60499 249 aa16.77■□□□□ 0.28
RPS28-203ENST00000600659 CILPO75339 1184 aa16.77■□□□□ 0.28
RPS28-203ENST00000600659 ECI2O75521 394 aa16.77■□□□□ 0.28
RPS28-203ENST00000600659 CSH1P0DML2 217 aa16.77■□□□□ 0.28
RPS28-203ENST00000600659 CSH2P0DML3 217 aa16.77■□□□□ 0.28
RPS28-203ENST00000600659 P4HA1P13674 534 aa16.77■□□□□ 0.28
RPS28-203ENST00000600659 NLRP12P59046 1061 aa16.77■□□□□ 0.28
RPS28-203ENST00000600659 ACOT1Q86TX2 421 aa16.77■□□□□ 0.28
RPS28-203ENST00000600659 FAM35AQ86V20 835 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms