RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 AASDHQ4L235 1098 aaPredicted RBP22.74■■□□□ 1.23
PNKP-212ENST00000599454 RRAGBQ5VZM2 374 aa22.74■■□□□ 1.23
PNKP-212ENST00000599454 IL31Q6EBC2 164 aa22.74■■□□□ 1.23
PNKP-212ENST00000599454 SV2BQ7L1I2 683 aa22.74■■□□□ 1.23
PNKP-212ENST00000599454 CPA6Q8N4T0 437 aa22.74■■□□□ 1.23
PNKP-212ENST00000599454 C12orf50Q8NA57 414 aaPredicted RBP22.74■■□□□ 1.23
PNKP-212ENST00000599454 CHFRQ96EP1 664 aa22.74■■□□□ 1.23
PNKP-212ENST00000599454 ARRDC1-AS1Q9H2J1 176 aa22.74■■□□□ 1.23
PNKP-212ENST00000599454 OLFML3Q9NRN5 406 aa22.74■■□□□ 1.23
PNKP-212ENST00000599454 RBAKQ9NYW8 714 aaPredicted RBP22.74■■□□□ 1.23
PNKP-212ENST00000599454 PCDHGA5Q9Y5G8 931 aa22.74■■□□□ 1.23
PNKP-212ENST00000599454 RNF40O75150 1001 aa22.73■■□□□ 1.23
PNKP-212ENST00000599454 GCNT3O95395 438 aa22.73■■□□□ 1.23
PNKP-212ENST00000599454 EGFP01133 1207 aa22.73■■□□□ 1.23
PNKP-212ENST00000599454 ARSAP15289 507 aa22.73■■□□□ 1.23
PNKP-212ENST00000599454 HOXC13P31276 330 aa22.73■■□□□ 1.23
PNKP-212ENST00000599454 GPR15P49685 360 aa22.73■■□□□ 1.23
PNKP-212ENST00000599454 MTF1Q14872 753 aa22.73■■□□□ 1.23
PNKP-212ENST00000599454 CFAP221Q4G0U5 840 aa22.73■■□□□ 1.23
PNKP-212ENST00000599454 USP49Q70CQ1 688 aa22.73■■□□□ 1.23
PNKP-212ENST00000599454 TOP6BLQ8N6T0 577 aa22.73■■□□□ 1.23
PNKP-212ENST00000599454 DNAJC19Q96DA6 116 aa22.73■■□□□ 1.23
PNKP-212ENST00000599454 SAAL1Q96ER3 474 aa22.73■■□□□ 1.23
PNKP-212ENST00000599454 FUBP3Q96I24 572 aaKnown RBP eCLIP22.73■■□□□ 1.23
PNKP-212ENST00000599454 ZC3H10Q96K80 434 aaKnown RBP22.73■■□□□ 1.23
PNKP-212ENST00000599454 PKMYT1Q99640 499 aa22.73■■□□□ 1.23
PNKP-212ENST00000599454 P2RY13Q9BPV8 354 aa22.73■■□□□ 1.23
PNKP-212ENST00000599454 SRPRBQ9Y5M8 271 aaKnown RBP22.73■■□□□ 1.23
PNKP-212ENST00000599454 TRAV19A0A0A6YYK7 116 aa22.72■■□□□ 1.23
PNKP-212ENST00000599454 MYMKA6NI61 221 aa22.72■■□□□ 1.23
PNKP-212ENST00000599454 TADA3O75528 432 aa22.72■■□□□ 1.23
PNKP-212ENST00000599454 USP17L7P0C7H9 530 aa22.72■■□□□ 1.23
PNKP-212ENST00000599454 CYP2F1P24903 491 aa22.72■■□□□ 1.23
PNKP-212ENST00000599454 PCSK1P29120 753 aa22.72■■□□□ 1.23
PNKP-212ENST00000599454 GJA4P35212 333 aa22.72■■□□□ 1.23
PNKP-212ENST00000599454 LHX1P48742 406 aa22.72■■□□□ 1.23
PNKP-212ENST00000599454 GALK1P51570 392 aa22.72■■□□□ 1.23
PNKP-212ENST00000599454 WNT7BP56706 349 aa22.72■■□□□ 1.23
PNKP-212ENST00000599454 KCNA1Q09470 495 aa22.72■■□□□ 1.23
PNKP-212ENST00000599454 DDR2Q16832 855 aa22.72■■□□□ 1.23
PNKP-212ENST00000599454 SDHAF4Q5VUM1 108 aa22.72■■□□□ 1.23
PNKP-212ENST00000599454 KBTBD6Q86V97 674 aa22.72■■□□□ 1.23
PNKP-212ENST00000599454 SYCP3Q8IZU3 236 aa22.72■■□□□ 1.23
PNKP-212ENST00000599454 RIN3Q8TB24 985 aa22.72■■□□□ 1.23
PNKP-212ENST00000599454 OSCP1Q8WVF1 389 aa22.72■■□□□ 1.23
PNKP-212ENST00000599454 ECT2Q9H8V3 914 aa22.72■■□□□ 1.23
PNKP-212ENST00000599454 PDCP20941 246 aa22.71■■□□□ 1.23
PNKP-212ENST00000599454 ACAT1P24752 427 aaKnown RBP22.71■■□□□ 1.23
PNKP-212ENST00000599454 PXNP49023 591 aaPredicted RBP22.71■■□□□ 1.23
PNKP-212ENST00000599454 RBP5P82980 135 aa22.71■■□□□ 1.23
PNKP-212ENST00000599454 ZNF77Q15935 545 aa22.71■■□□□ 1.23
PNKP-212ENST00000599454 SPATA2LQ8IUW3 424 aaPredicted RBP22.71■■□□□ 1.23
PNKP-212ENST00000599454 CSGALNACT2Q8N6G5 542 aa22.71■■□□□ 1.23
PNKP-212ENST00000599454 FSIP1Q8NA03 581 aa22.71■■□□□ 1.23
PNKP-212ENST00000599454 CCDC26Q8TAB7 109 aa22.71■■□□□ 1.23
PNKP-212ENST00000599454 CXorf38Q8TB03 319 aa22.71■■□□□ 1.23
PNKP-212ENST00000599454 ATP2A3Q93084 1043 aa22.71■■□□□ 1.23
PNKP-212ENST00000599454 DUS2Q9NX74 493 aaKnown RBP22.71■■□□□ 1.23
PNKP-212ENST00000599454 TBC1D7Q9P0N9 293 aa22.71■■□□□ 1.23
PNKP-212ENST00000599454 FBXO2Q9UK22 296 aaPredicted RBP22.71■■□□□ 1.23
PNKP-212ENST00000599454 GTF3C4Q9UKN8 822 aa22.71■■□□□ 1.23
PNKP-212ENST00000599454 SNX9Q9Y5X1 595 aa22.71■■□□□ 1.23
PNKP-212ENST00000599454 CLIC4Q9Y696 253 aa22.71■■□□□ 1.23
PNKP-212ENST00000599454 THADAQ6YHU6 1953 aa22.7■■□□□ 1.23
PNKP-212ENST00000599454 KIAA0391O15091 583 aaKnown RBP22.7■■□□□ 1.22
PNKP-212ENST00000599454 CKMP06732 381 aa22.7■■□□□ 1.22
PNKP-212ENST00000599454 TCF3P15923 654 aa22.7■■□□□ 1.22
PNKP-212ENST00000599454 MAGEA11P43364 429 aa22.7■■□□□ 1.22
PNKP-212ENST00000599454 IFNAR2P48551 515 aa22.7■■□□□ 1.22
PNKP-212ENST00000599454 USP4Q13107 963 aa22.7■■□□□ 1.22
PNKP-212ENST00000599454 SF3A2Q15428 464 aaKnown RBP22.7■■□□□ 1.22
PNKP-212ENST00000599454 PLA2G2CQ5R387 149 aa22.7■■□□□ 1.22
PNKP-212ENST00000599454 CCDC73Q6ZRK6 1079 aa22.7■■□□□ 1.22
PNKP-212ENST00000599454 SYT13Q7L8C5 426 aa22.7■■□□□ 1.22
PNKP-212ENST00000599454 DPH6Q7L8W6 267 aa22.7■■□□□ 1.22
PNKP-212ENST00000599454 ADGRF2Q8IZF7 708 aa22.7■■□□□ 1.22
PNKP-212ENST00000599454 STKLD1Q8NE28 680 aa22.7■■□□□ 1.22
PNKP-212ENST00000599454 CD101Q93033 1021 aa22.7■■□□□ 1.22
PNKP-212ENST00000599454 ACDQ96AP0 544 aa22.7■■□□□ 1.22
PNKP-212ENST00000599454 CEP295NLQ96MC4 621 aa22.7■■□□□ 1.22
PNKP-212ENST00000599454 TRPC7Q9HCX4 862 aa22.7■■□□□ 1.22
PNKP-212ENST00000599454 R3HCC1Q9Y3T6 440 aaKnown RBP22.7■■□□□ 1.22
PNKP-212ENST00000599454 ABCA7Q8IZY2 2146 aa22.7■■□□□ 1.22
PNKP-212ENST00000599454 FRMD3A2A2Y4 597 aa22.69■■□□□ 1.22
PNKP-212ENST00000599454 VPS37CA5D8V6 355 aaPredicted RBP22.69■■□□□ 1.22
PNKP-212ENST00000599454 TULP1O00294 542 aaPredicted RBP22.69■■□□□ 1.22
PNKP-212ENST00000599454 GABRDO14764 452 aa22.69■■□□□ 1.22
PNKP-212ENST00000599454 KRT19P08727 400 aa22.69■■□□□ 1.22
PNKP-212ENST00000599454 TMEM191BP0C7N4 346 aa22.69■■□□□ 1.22
PNKP-212ENST00000599454 PDE6CP51160 858 aa22.69■■□□□ 1.22
PNKP-212ENST00000599454 MYO1EQ12965 1108 aa22.69■■□□□ 1.22
PNKP-212ENST00000599454 NR1H3Q13133 447 aa22.69■■□□□ 1.22
PNKP-212ENST00000599454 C4orf50Q6ZRC1 276 aa22.69■■□□□ 1.22
PNKP-212ENST00000599454 OSTM1Q86WC4 334 aa22.69■■□□□ 1.22
PNKP-212ENST00000599454 ZSWIM2Q8NEG5 633 aa22.69■■□□□ 1.22
PNKP-212ENST00000599454 FBRSL1Q9HCM7 1045 aaKnown RBP22.69■■□□□ 1.22
PNKP-212ENST00000599454 VPS45Q9NRW7 570 aa22.69■■□□□ 1.22
PNKP-212ENST00000599454 TM4SF5O14894 197 aa22.68■■□□□ 1.22
PNKP-212ENST00000599454 IDEP14735 1019 aa22.68■■□□□ 1.22
PNKP-212ENST00000599454 PFKLP17858 780 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms