RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 CNR2P34972 360 aa11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 GJA4P35212 333 aa11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 RAP1GAPP47736 663 aa11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 BFSP1Q12934 665 aa11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 PPP2R5DQ14738 602 aa11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 GAB4Q2WGN9 574 aa11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 FAM171BQ6P995 826 aa11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 SV2BQ7L1I2 683 aa11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 NT5DC4Q86YG4 428 aa11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 LEO1Q8WVC0 666 aaPredicted RBP11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 MTMR12Q9C0I1 747 aa11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 GZF1Q9H116 711 aaPredicted RBP11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 CRTAC1Q9NQ79 661 aa11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 OLFML3Q9NRN5 406 aa11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 THG1LQ9NWX6 298 aaKnown RBP11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 RBAKQ9NYW8 714 aaPredicted RBP11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 SEL1LQ9UBV2 794 aa11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 RAB23Q9ULC3 237 aa11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 MTMR6Q9Y217 621 aa11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 SNX9Q9Y5X1 595 aa11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 NUP210Q8TEM1 1887 aaPredicted RBP11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 KIF26AQ9ULI4 1882 aaPredicted RBP11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 RNF40O75150 1001 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 ADRB1P08588 477 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 CHRM1P11229 460 aaPredicted RBP11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 IDEP14735 1019 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 GAP43P17677 238 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 SDHBP21912 280 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 GARTP22102 1010 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 ABCD1P33897 745 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 AVPR1AP37288 418 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 USP46P62068 366 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 SLC39A14Q15043 492 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 ZNF77Q15935 545 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 TAF12Q16514 161 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 CBWD2Q8IUF1 395 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 SFTPA1Q8IWL2 248 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 LRRC52Q8N7C0 313 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 ARL14EPQ8N8R7 260 aaPredicted RBP11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 NETO1Q8TDF5 533 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 ARRDC1-AS1Q9H2J1 176 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 ABCB6Q9NP58 842 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 TMEM30AQ9NV96 361 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 PANK4Q9NVE7 773 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 CCDC39Q9UFE4 941 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 WNT6Q9Y6F9 365 aa11.84□□□□□ -0.51
GRAMD1A-209ENST00000598580 SOBPA7XYQ1 873 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 DCLK1O15075 740 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 HUS1O60921 280 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 CST3P01034 146 aaPredicted RBP11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 CSH1P0DML2 217 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 CSH2P0DML3 217 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 PNPLA4P41247 253 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 CACNA2D1P54289 1103 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 PSMC1P62191 440 aaKnown RBP11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 RBP5P82980 135 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 TSPY1Q01534 308 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 MESP2Q0VG99 397 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 ZNF268Q14587 947 aaPredicted RBP11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 E2F4Q16254 413 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 NFE2Q16621 373 aaPredicted RBP11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 EML3Q32P44 896 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 CFAP221Q4G0U5 840 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 PPM1JQ5JR12 505 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 PLA2G2CQ5R387 149 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 CEP68Q76N32 757 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 ADGRF2Q8IZF7 708 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 TOP6BLQ8N6T0 577 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 PDILTQ8N807 584 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 GAB3Q8WWW8 586 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 MRPS31Q92665 395 aaKnown RBP11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 TRMT2BQ96GJ1 504 aaKnown RBP11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 ZNF560Q96MR9 790 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 GCNAQ96QF7 691 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 HHIPQ96QV1 700 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 ECT2Q9H8V3 914 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 INTS13Q9NVM9 706 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 ITGA11Q9UKX5 1188 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 PCDHB13Q9Y5F0 798 aa11.83□□□□□ -0.52
GRAMD1A-209ENST00000598580 LAMA1P25391 3075 aa11.82□□□□□ -0.52
GRAMD1A-209ENST00000598580 TGFB1I1O43294 461 aa11.82□□□□□ -0.52
GRAMD1A-209ENST00000598580 RPP40O75818 363 aaKnown RBP11.82□□□□□ -0.52
GRAMD1A-209ENST00000598580 KRT19P08727 400 aa11.82□□□□□ -0.52
GRAMD1A-209ENST00000598580 PDGFRBP09619 1106 aa11.82□□□□□ -0.52
GRAMD1A-209ENST00000598580 DDX6P26196 483 aaKnown RBP eCLIP11.82□□□□□ -0.52
GRAMD1A-209ENST00000598580 RPL10AP62906 217 aaKnown RBP11.82□□□□□ -0.52
GRAMD1A-209ENST00000598580 GRSF1Q12849 480 aaKnown RBP eCLIP11.82□□□□□ -0.52
GRAMD1A-209ENST00000598580 USP4Q13107 963 aa11.82□□□□□ -0.52
GRAMD1A-209ENST00000598580 MTF1Q14872 753 aa11.82□□□□□ -0.52
GRAMD1A-209ENST00000598580 PDGFRLQ15198 375 aa11.82□□□□□ -0.52
GRAMD1A-209ENST00000598580 PLK5Q496M5 336 aa11.82□□□□□ -0.52
GRAMD1A-209ENST00000598580 TCEAL6Q6IPX3 200 aa11.82□□□□□ -0.52
GRAMD1A-209ENST00000598580 SCN4BQ8IWT1 228 aa11.82□□□□□ -0.52
GRAMD1A-209ENST00000598580 SYCP3Q8IZU3 236 aa11.82□□□□□ -0.52
GRAMD1A-209ENST00000598580 TMEM86AQ8N2M4 240 aa11.82□□□□□ -0.52
GRAMD1A-209ENST00000598580 SH3RF2Q8TEC5 729 aa11.82□□□□□ -0.52
GRAMD1A-209ENST00000598580 NOC3LQ8WTT2 800 aaKnown RBP11.82□□□□□ -0.52
GRAMD1A-209ENST00000598580 CACTINQ8WUQ7 758 aaKnown RBP11.82□□□□□ -0.52
GRAMD1A-209ENST00000598580 OSCP1Q8WVF1 389 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms