RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 PCDH9Q9HC56 1237 aa20.63■□□□□ 0.89
GRAMD1A-207ENST00000598118 ALOX15BO15296 676 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 SPAG7O75391 227 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 UBOX5O94941 541 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 ERBB2P04626 1255 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 GSTA1P08263 222 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 ARHGEF18Q6ZSZ5 1173 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 MAGEB18Q96M61 343 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 SGIP1Q9BQI5 828 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 PDGFCQ9NRA1 345 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 NKIRAS1Q9NYS0 192 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 RBPJLQ9UBG7 517 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 AGTPBP1Q9UPW5 1226 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 CST8O60676 142 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 PDIA2Q13087 525 aaKnown RBP20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 TAF5Q15542 800 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 PKN2Q16513 984 aaKnown RBP20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 ZNF667Q5HYK9 610 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 CEP128Q6ZU80 1094 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 FAM228AQ86W67 206 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 XYLT1Q86Y38 959 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 PARP9Q8IXQ6 854 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 RIBC1Q8N443 379 aaPredicted RBP20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 SLC4A11Q8NBS3 891 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 ADAM33Q9BZ11 813 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 RNPEPQ9H4A4 650 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 VPS37BQ9H9H4 285 aa20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 RPF1Q9H9Y2 349 aaKnown RBP20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 METTL5Q9NRN9 209 aaKnown RBP20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 FARP1Q9Y4F1 1045 aaPredicted RBP20.62■□□□□ 0.89
GRAMD1A-207ENST00000598118 LACTBL1A8MY62 500 aa20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 TAC1P20366 129 aa20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 KDELR1P24390 212 aa20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 POLR2BP30876 1174 aaKnown RBP20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 ANKRD22Q5VYY1 191 aa20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 MOB2Q70IA6 237 aa20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 SPATA21Q7Z572 469 aa20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 CXorf38Q8TB03 319 aa20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 TTC25Q96NG3 672 aa20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 ELOVL4Q9GZR5 314 aa20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 PRKAG3Q9UGI9 489 aa20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 SHOC2Q9UQ13 582 aa20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 TNFSF13BQ9Y275 285 aa20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 DNAJC25-GNG10A0A024R161 153 aa20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 TFDP1Q14186 410 aa20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 TDRPQ86YL5 185 aa20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 ANKMY2Q8IV38 441 aa20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 EXOC8Q8IYI6 725 aa20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 MRRFQ96E11 262 aaKnown RBP20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 PPP1R16BQ96T49 567 aa20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 IFT122Q9HBG6 1241 aa20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 PCSK1NQ9UHG2 260 aa20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 DICER1Q9UPY3 1922 aaKnown RBP20.61■□□□□ 0.89
GRAMD1A-207ENST00000598118 FAM47DPA6NHR8 397 aa20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 SUN1O94901 812 aa20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 ITGB3P05106 788 aa20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 GTF2A1P52655 376 aaPredicted RBP20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 GPX6P59796 221 aa20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 MSS51Q4VC12 460 aa20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 JADE1Q6IE81 842 aa20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 TAB3Q8N5C8 712 aaPredicted RBP20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 FNIP1Q8TF40 1166 aa20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 CPT1BQ92523 772 aa20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 MED7O43513 233 aa20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 DDNO94850 711 aaPredicted RBP20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 KRT7P08729 469 aa20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 TXNP10599 105 aaKnown RBP20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 IGBP1P78318 339 aa20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 ELF3P78545 371 aaPredicted RBP20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 MGAT5Q09328 741 aa20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 TAZQ16635 292 aa20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 GALNTL6Q49A17 601 aa20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 SWT1Q5T5J6 900 aaKnown RBP20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 PPP1R21Q6ZMI0 780 aa20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 BBS12Q6ZW61 710 aa20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 CENPUQ71F23 418 aa20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 DENND1AQ8TEH3 1009 aa20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 RMDN2Q96LZ7 410 aa20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 SMARCAD1Q9H4L7 1026 aa20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 EFR3BQ9Y2G0 817 aa20.6■□□□□ 0.89
GRAMD1A-207ENST00000598118 ASMTLO95671 621 aa20.59■□□□□ 0.89
GRAMD1A-207ENST00000598118 SLC25A27O95847 323 aa20.59■□□□□ 0.89
GRAMD1A-207ENST00000598118 STAG3L1P0CL83 205 aa20.59■□□□□ 0.89
GRAMD1A-207ENST00000598118 CTCFP49711 727 aaPredicted RBP20.59■□□□□ 0.89
GRAMD1A-207ENST00000598118 PTPN11Q06124 597 aaPredicted RBP20.59■□□□□ 0.89
GRAMD1A-207ENST00000598118 FNBP1LQ5T0N5 605 aa20.59■□□□□ 0.89
GRAMD1A-207ENST00000598118 PAIP2Q9BPZ3 127 aaKnown RBP20.59■□□□□ 0.89
GRAMD1A-207ENST00000598118 WDR83Q9BRX9 315 aaKnown RBP20.59■□□□□ 0.89
GRAMD1A-207ENST00000598118 TRABDQ9H4I3 376 aa20.59■□□□□ 0.89
GRAMD1A-207ENST00000598118 CLUHO75153 1309 aa20.59■□□□□ 0.89
GRAMD1A-207ENST00000598118 TCRBV7S3A2A0A539 114 aa20.58■□□□□ 0.89
GRAMD1A-207ENST00000598118 MGRN1O60291 552 aa20.58■□□□□ 0.89
GRAMD1A-207ENST00000598118 HBP1O60381 514 aa20.58■□□□□ 0.89
GRAMD1A-207ENST00000598118 PIAS1O75925 651 aa20.58■□□□□ 0.89
GRAMD1A-207ENST00000598118 MICAL2O94851 1124 aa20.58■□□□□ 0.89
GRAMD1A-207ENST00000598118 IL18RAPO95256 599 aa20.58■□□□□ 0.89
GRAMD1A-207ENST00000598118 C22orf31O95567 290 aa20.58■□□□□ 0.89
GRAMD1A-207ENST00000598118 NRLP54845 237 aa20.58■□□□□ 0.89
GRAMD1A-207ENST00000598118 MYO1EQ12965 1108 aa20.58■□□□□ 0.89
GRAMD1A-207ENST00000598118 MTM1Q13496 603 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms