RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 GPM6BQ13491 265 aa22.13■■□□□ 1.13
IRF3-214ENST00000596788 STILQ15468 1287 aa22.13■■□□□ 1.13
IRF3-214ENST00000596788 SLC39A12Q504Y0 691 aa22.13■■□□□ 1.13
IRF3-214ENST00000596788 SLC8B1Q6J4K2 584 aa22.13■■□□□ 1.13
IRF3-214ENST00000596788 PAQR9Q6ZVX9 377 aa22.13■■□□□ 1.13
IRF3-214ENST00000596788 FAM35AQ86V20 835 aa22.13■■□□□ 1.13
IRF3-214ENST00000596788 TTC30AQ86WT1 665 aa22.13■■□□□ 1.13
IRF3-214ENST00000596788 SLC30A5Q8TAD4 765 aa22.13■■□□□ 1.13
IRF3-214ENST00000596788 CCDC42Q96M95 316 aa22.13■■□□□ 1.13
IRF3-214ENST00000596788 HNRNPABQ99729 332 aaKnown RBP22.13■■□□□ 1.13
IRF3-214ENST00000596788 TCF25Q9BQ70 676 aa22.13■■□□□ 1.13
IRF3-214ENST00000596788 CLSTN3Q9BQT9 956 aa22.13■■□□□ 1.13
IRF3-214ENST00000596788 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.13■■□□□ 1.13
IRF3-214ENST00000596788 RHOBTB2Q9BYZ6 727 aa22.13■■□□□ 1.13
IRF3-214ENST00000596788 ZNF518BQ9C0D4 1074 aa22.13■■□□□ 1.13
IRF3-214ENST00000596788 SLC28A3Q9HAS3 691 aa22.13■■□□□ 1.13
IRF3-214ENST00000596788 TLR9Q9NR96 1032 aa22.13■■□□□ 1.13
IRF3-214ENST00000596788 MRPL17Q9NRX2 175 aaKnown RBP22.13■■□□□ 1.13
IRF3-214ENST00000596788 SPTLC3Q9NUV7 552 aa22.13■■□□□ 1.13
IRF3-214ENST00000596788 ADAMTS1Q9UHI8 967 aa22.13■■□□□ 1.13
IRF3-214ENST00000596788 NENFQ9UMX5 172 aa22.13■■□□□ 1.13
IRF3-214ENST00000596788 A0A1W2PPC1 479 aa22.12■■□□□ 1.13
IRF3-214ENST00000596788 EPOPA6NHQ4 379 aa22.12■■□□□ 1.13
IRF3-214ENST00000596788 H3BNC9 293 aa22.12■■□□□ 1.13
IRF3-214ENST00000596788 ARHGAP6O43182 974 aa22.12■■□□□ 1.13
IRF3-214ENST00000596788 NRDCO43847 1150 aa22.12■■□□□ 1.13
IRF3-214ENST00000596788 AKR1B10O60218 316 aa22.12■■□□□ 1.13
IRF3-214ENST00000596788 CPB1P15086 417 aa22.12■■□□□ 1.13
IRF3-214ENST00000596788 ARPP19P56211 112 aa22.12■■□□□ 1.13
IRF3-214ENST00000596788 ROR1Q01973 937 aa22.12■■□□□ 1.13
IRF3-214ENST00000596788 CYP27A1Q02318 531 aa22.12■■□□□ 1.13
IRF3-214ENST00000596788 GFPT1Q06210 699 aaPredicted RBP22.12■■□□□ 1.13
IRF3-214ENST00000596788 BMS1Q14692 1282 aaKnown RBP22.12■■□□□ 1.13
IRF3-214ENST00000596788 VPS36Q86VN1 386 aa22.12■■□□□ 1.13
IRF3-214ENST00000596788 CCDC170Q8IYT3 715 aa22.12■■□□□ 1.13
IRF3-214ENST00000596788 DCP1BQ8IZD4 617 aaKnown RBP22.12■■□□□ 1.13
IRF3-214ENST00000596788 ARNTL2Q8WYA1 636 aa22.12■■□□□ 1.13
IRF3-214ENST00000596788 PDCL3Q9H2J4 239 aa22.12■■□□□ 1.13
IRF3-214ENST00000596788 RXFP1Q9HBX9 757 aa22.12■■□□□ 1.13
IRF3-214ENST00000596788 ENTPD7Q9NQZ7 604 aa22.12■■□□□ 1.13
IRF3-214ENST00000596788 KRT82Q9NSB4 513 aa22.12■■□□□ 1.13
IRF3-214ENST00000596788 COLQQ9Y215 455 aaPredicted RBP22.12■■□□□ 1.13
IRF3-214ENST00000596788 PCDHGC5Q9Y5F6 944 aa22.12■■□□□ 1.13
IRF3-214ENST00000596788 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.12■■□□□ 1.13
IRF3-214ENST00000596788 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.11■■□□□ 1.13
IRF3-214ENST00000596788 FAM170AA1A519 330 aa22.11■■□□□ 1.13
IRF3-214ENST00000596788 FSCN2O14926 492 aa22.11■■□□□ 1.13
IRF3-214ENST00000596788 CYP1A1P04798 512 aaPredicted RBP22.11■■□□□ 1.13
IRF3-214ENST00000596788 OR1D2P34982 312 aa22.11■■□□□ 1.13
IRF3-214ENST00000596788 CYLC1P35663 651 aaPredicted RBP22.11■■□□□ 1.13
IRF3-214ENST00000596788 NOMO3P69849 1222 aa22.11■■□□□ 1.13
IRF3-214ENST00000596788 CAMK1Q14012 370 aa22.11■■□□□ 1.13
IRF3-214ENST00000596788 MAPRE1Q15691 268 aaKnown RBP22.11■■□□□ 1.13
IRF3-214ENST00000596788 SLC18A3Q16572 532 aa22.11■■□□□ 1.13
IRF3-214ENST00000596788 CLEC16AQ2KHT3 1053 aa22.11■■□□□ 1.13
IRF3-214ENST00000596788 PKDCCQ504Y2 493 aa22.11■■□□□ 1.13
IRF3-214ENST00000596788 PLPP4Q5VZY2 271 aa22.11■■□□□ 1.13
IRF3-214ENST00000596788 TRIM72Q6ZMU5 477 aa22.11■■□□□ 1.13
IRF3-214ENST00000596788 TMC7Q7Z402 723 aa22.11■■□□□ 1.13
IRF3-214ENST00000596788 UBA3Q8TBC4 463 aa22.11■■□□□ 1.13
IRF3-214ENST00000596788 GDPD5Q8WTR4 605 aa22.11■■□□□ 1.13
IRF3-214ENST00000596788 MED10Q9BTT4 135 aa22.11■■□□□ 1.13
IRF3-214ENST00000596788 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.11■■□□□ 1.13
IRF3-214ENST00000596788 CHD7Q9P2D1 2997 aa22.1■■□□□ 1.13
IRF3-214ENST00000596788 WDR27A2RRH5 827 aa22.1■■□□□ 1.13
IRF3-214ENST00000596788 ZNF263O14978 683 aa22.1■■□□□ 1.13
IRF3-214ENST00000596788 NDUFA10O95299 355 aa22.1■■□□□ 1.13
IRF3-214ENST00000596788 VNN2O95498 520 aa22.1■■□□□ 1.13
IRF3-214ENST00000596788 LSM8O95777 96 aaKnown RBP22.1■■□□□ 1.13
IRF3-214ENST00000596788 CDH5P33151 784 aaPredicted RBP22.1■■□□□ 1.13
IRF3-214ENST00000596788 CA8P35219 290 aa22.1■■□□□ 1.13
IRF3-214ENST00000596788 IRS1P35568 1242 aa22.1■■□□□ 1.13
IRF3-214ENST00000596788 CREMQ03060 361 aa22.1■■□□□ 1.13
IRF3-214ENST00000596788 GPR17Q13304 367 aa22.1■■□□□ 1.13
IRF3-214ENST00000596788 SMC1AQ14683 1233 aaKnown RBP22.1■■□□□ 1.13
IRF3-214ENST00000596788 NFE2Q16621 373 aaPredicted RBP22.1■■□□□ 1.13
IRF3-214ENST00000596788 NAA35Q5VZE5 725 aa22.1■■□□□ 1.13
IRF3-214ENST00000596788 SPATA2LQ8IUW3 424 aaPredicted RBP22.1■■□□□ 1.13
IRF3-214ENST00000596788 C1orf131Q8NDD1 294 aaKnown RBP22.1■■□□□ 1.13
IRF3-214ENST00000596788 PGLYRP2Q96PD5 576 aa22.1■■□□□ 1.13
IRF3-214ENST00000596788 LHX5Q9H2C1 402 aa22.1■■□□□ 1.13
IRF3-214ENST00000596788 TMEM30AQ9NV96 361 aa22.1■■□□□ 1.13
IRF3-214ENST00000596788 TAS2R14Q9NYV8 317 aa22.1■■□□□ 1.13
IRF3-214ENST00000596788 FNIP2Q9P278 1114 aa22.1■■□□□ 1.13
IRF3-214ENST00000596788 HESX1Q9UBX0 185 aa22.1■■□□□ 1.13
IRF3-214ENST00000596788 NAGPAQ9UK23 515 aa22.1■■□□□ 1.13
IRF3-214ENST00000596788 SSX2IPQ9Y2D8 614 aa22.1■■□□□ 1.13
IRF3-214ENST00000596788 EPN1Q9Y6I3 576 aaPredicted RBP22.1■■□□□ 1.13
IRF3-214ENST00000596788 ATP8B3O60423 1300 aa22.09■■□□□ 1.13
IRF3-214ENST00000596788 MTMR11A4FU01 709 aa22.09■■□□□ 1.13
IRF3-214ENST00000596788 EIF3CLB5ME19 914 aaKnown RBP22.09■■□□□ 1.13
IRF3-214ENST00000596788 TEX28O15482 410 aa22.09■■□□□ 1.13
IRF3-214ENST00000596788 LCA5LO95447 670 aa22.09■■□□□ 1.13
IRF3-214ENST00000596788 CXCL14O95715 111 aa22.09■■□□□ 1.13
IRF3-214ENST00000596788 UNGP13051 313 aaPredicted RBP22.09■■□□□ 1.13
IRF3-214ENST00000596788 NDUFV1P49821 464 aa22.09■■□□□ 1.13
IRF3-214ENST00000596788 CACNA2D1P54289 1103 aa22.09■■□□□ 1.13
IRF3-214ENST00000596788 BCAT1P54687 386 aa22.09■■□□□ 1.13
IRF3-214ENST00000596788 LRIT3Q3SXY7 679 aa22.09■■□□□ 1.13
IRF3-214ENST00000596788 RNF19BQ6ZMZ0 732 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms