RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 IDEP14735 1019 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 ARSAP15289 507 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 CYP2F1P24903 491 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 GALK1P51570 392 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 WNT7BP56706 349 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 CEBPZQ03701 1054 aaKnown RBP11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 PSMD2Q13200 908 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 CCDC6Q16204 474 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 INTS6LQ5JSJ4 861 aaKnown RBP11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 L1TD1Q5T7N2 865 aaKnown RBP11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 BRSK2Q8IWQ3 736 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 SCN4BQ8IWT1 228 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 C1orf127Q8N9H9 656 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 GAB3Q8WWW8 586 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 EXOC4Q96A65 974 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 CHAMP1Q96JM3 812 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 PCIF1Q9H4Z3 704 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 TRPC7Q9HCX4 862 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 RBAKQ9NYW8 714 aaPredicted RBP11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 GTF3C4Q9UKN8 822 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 L1RE1Q9UN81 338 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 PCDHB13Q9Y5F0 798 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 SNX9Q9Y5X1 595 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 FRYLO94915 3013 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 CCDC163A0A0D9SF12 145 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 TMEM191BP0C7N4 346 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 DRD1P21728 446 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 GARTP22102 1010 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 GJA4P35212 333 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 IFNAR2P48551 515 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 RBP5P82980 135 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 FAM160A1Q05DH4 1040 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 ZNF268Q14587 947 aaPredicted RBP11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 MTF1Q14872 753 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 PDGFRLQ15198 375 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 SF3A2Q15428 464 aaKnown RBP11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 KBTBD6Q86V97 674 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 SPATA2LQ8IUW3 424 aaPredicted RBP11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 TMEM86AQ8N2M4 240 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 CPA6Q8N4T0 437 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 LEO1Q8WVC0 666 aaPredicted RBP11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 DDX1Q92499 740 aaKnown RBP11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 DNAJC19Q96DA6 116 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 CHFRQ96EP1 664 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 LOXL4Q96JB6 756 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 CLIC6Q96NY7 704 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 CYP2S1Q96SQ9 504 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 P2RY13Q9BPV8 354 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 STRA6Q9BX79 667 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 PANK2Q9BZ23 570 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 ECT2Q9H8V3 914 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 FBRSL1Q9HCM7 1045 aaKnown RBP11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 POLR3BQ9NW08 1133 aaPredicted RBP11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 DUS2Q9NX74 493 aaKnown RBP11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 ITGA11Q9UKX5 1188 aa11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 SRPRBQ9Y5M8 271 aaKnown RBP11.34□□□□□ -0.59
CHMP2A-202ENST00000596708 TRAV19A0A0A6YYK7 116 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 KRT37O76014 449 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 NOL4O94818 638 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 PRPF6O94906 941 aaKnown RBP11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 EPN2O95208 641 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 CKMP06732 381 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 USP17L7P0C7H9 530 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 ZNF806P0C7X5 589 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 PCSK1P29120 753 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 STAT6P42226 847 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 LHX1P48742 406 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 CASP5P51878 434 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 NR1H3Q13133 447 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 ALCAMQ13740 583 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 FBXO43Q4G163 708 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 LMBRD2Q68DH5 695 aaPredicted RBP11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 SCARA3Q6AZY7 606 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 CCDC73Q6ZRK6 1079 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 OSTM1Q86WC4 334 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 ADGRF2Q8IZF7 708 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 GPD1LQ8N335 351 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 CAMKK1Q8N5S9 505 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 TOP6BLQ8N6T0 577 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 LRRC52Q8N7C0 313 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 FSIP1Q8NA03 581 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 RPLP0P6Q8NHW5 317 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 RIN3Q8TB24 985 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 OSCP1Q8WVF1 389 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 CD101Q93033 1021 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 ANKRD36BP1Q96IX9 119 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 FAM84AQ96KN4 292 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 HHIPQ96QV1 700 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 CBWD1Q9BRT8 395 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 PDE11AQ9HCR9 933 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 ABCB6Q9NP58 842 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 PANK4Q9NVE7 773 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 GDAP2Q9NXN4 497 aa11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 MAGEC2Q9UBF1 373 aaPredicted RBP11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 FBXO2Q9UK22 296 aaPredicted RBP11.33□□□□□ -0.6
CHMP2A-202ENST00000596708 MAP1BP46821 2468 aaKnown RBP11.32□□□□□ -0.6
CHMP2A-202ENST00000596708 HCRTO43612 131 aa11.32□□□□□ -0.6
CHMP2A-202ENST00000596708 TADA3O75528 432 aa11.32□□□□□ -0.6
CHMP2A-202ENST00000596708 PDCP20941 246 aa11.32□□□□□ -0.6
CHMP2A-202ENST00000596708 RAP1GAPP47736 663 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms