RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 MLKLQ8NB16 471 aa11.9□□□□□ -0.5
VRK3-210ENST00000596121 FBXL13Q8NEE6 735 aa11.9□□□□□ -0.5
VRK3-210ENST00000596121 ARID3AQ99856 593 aa11.9□□□□□ -0.5
VRK3-210ENST00000596121 PLA2G2FQ9BZM2 168 aa11.9□□□□□ -0.5
VRK3-210ENST00000596121 ZNF518BQ9C0D4 1074 aa11.9□□□□□ -0.5
VRK3-210ENST00000596121 ABCB6Q9NP58 842 aa11.9□□□□□ -0.5
VRK3-210ENST00000596121 ASAH2Q9NR71 780 aa11.9□□□□□ -0.5
VRK3-210ENST00000596121 RAB20Q9NX57 234 aa11.9□□□□□ -0.5
VRK3-210ENST00000596121 NCANO14594 1321 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 A0A1W2PRU2 124 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 MICAL2O94851 1124 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 FCARP24071 287 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 MAGEA11P43364 429 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 FMO5P49326 533 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 MARSP56192 900 aaKnown RBP11.89□□□□□ -0.51
VRK3-210ENST00000596121 CYP27A1Q02318 531 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 PLD1Q13393 1074 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 CCDC40Q4G0X9 1142 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 FAM78AQ5JUQ0 283 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 CYP4A22Q5TCH4 519 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 TRIM67Q6ZTA4 783 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 PDZD4Q76G19 769 aaPredicted RBP11.89□□□□□ -0.51
VRK3-210ENST00000596121 ACOT1Q86TX2 421 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 SPATA2LQ8IUW3 424 aaPredicted RBP11.89□□□□□ -0.51
VRK3-210ENST00000596121 GPIHBP1Q8IV16 184 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 CRYBG2Q8N1P7 616 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 ELMOD1Q8N336 334 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 C12orf29Q8N999 325 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 B3GALNT2Q8NCR0 500 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 LMO3Q8TAP4 145 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 FAM200AQ8TCP9 573 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 RSPRY1Q96DX4 576 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 ASIC4Q96FT7 647 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 FUBP3Q96I24 572 aaKnown RBP eCLIP11.89□□□□□ -0.51
VRK3-210ENST00000596121 ELOVL4Q9GZR5 314 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 METTL14Q9HCE5 456 aaKnown RBP11.89□□□□□ -0.51
VRK3-210ENST00000596121 IGSF9Q9P2J2 1179 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 MAGEC2Q9UBF1 373 aaPredicted RBP11.89□□□□□ -0.51
VRK3-210ENST00000596121 SORCS3Q9UPU3 1222 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 ASB3Q9Y575 518 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 NUMBLQ9Y6R0 609 aa11.89□□□□□ -0.51
VRK3-210ENST00000596121 SLC38A8A6NNN8 435 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 ZNF197O14709 1029 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 STX10O60499 249 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 NOL4O94818 638 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 CLSTN1O94985 981 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 F11P03951 625 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 CCDC130P13994 396 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 CD58P19256 250 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 GABRR2P28476 465 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 USP46P62068 366 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 CYP4F8P98187 520 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 INCA1Q0VD86 236 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 LRMPQ12912 555 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 TDGQ13569 410 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 IER5LQ5T953 404 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 TANGO2Q6ICL3 276 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 C4orf50Q6ZRC1 276 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 SCN4BQ8IWT1 228 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 FUKQ8N0W3 1084 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 KXD1Q9BQD3 176 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 LRFN3Q9BTN0 628 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 NIF3L1Q9GZT8 377 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 CYP3A43Q9HB55 503 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 GDE1Q9NZC3 331 aa11.88□□□□□ -0.51
VRK3-210ENST00000596121 ZFP37Q9Y6Q3 630 aaPredicted RBP11.88□□□□□ -0.51
VRK3-210ENST00000596121 PMM2O15305 246 aa11.87□□□□□ -0.51
VRK3-210ENST00000596121 GPR37L1O60883 481 aa11.87□□□□□ -0.51
VRK3-210ENST00000596121 CILPO75339 1184 aa11.87□□□□□ -0.51
VRK3-210ENST00000596121 TADA3O75528 432 aa11.87□□□□□ -0.51
VRK3-210ENST00000596121 PDGFBP01127 241 aaPredicted RBP11.87□□□□□ -0.51
VRK3-210ENST00000596121 VIPR2P41587 438 aa11.87□□□□□ -0.51
VRK3-210ENST00000596121 RPL10AP62906 217 aaKnown RBP11.87□□□□□ -0.51
VRK3-210ENST00000596121 KCNH2Q12809 1159 aa11.87□□□□□ -0.51
VRK3-210ENST00000596121 VSTM1Q6UX27 236 aa11.87□□□□□ -0.51
VRK3-210ENST00000596121 ITIH5Q86UX2 942 aa11.87□□□□□ -0.51
VRK3-210ENST00000596121 UNC93AQ86WB7 457 aa11.87□□□□□ -0.51
VRK3-210ENST00000596121 UBR7Q8N806 425 aa11.87□□□□□ -0.51
VRK3-210ENST00000596121 LEMD2Q8NC56 503 aa11.87□□□□□ -0.51
VRK3-210ENST00000596121 ZMIZ2Q8NF64 920 aa11.87□□□□□ -0.51
VRK3-210ENST00000596121 KAT5Q92993 513 aa11.87□□□□□ -0.51
VRK3-210ENST00000596121 CNOT6LQ96LI5 555 aaKnown RBP11.87□□□□□ -0.51
VRK3-210ENST00000596121 MYRFLQ96LU7 910 aa11.87□□□□□ -0.51
VRK3-210ENST00000596121 ASB16Q96NS5 453 aa11.87□□□□□ -0.51
VRK3-210ENST00000596121 LRRC3BQ96PB8 259 aa11.87□□□□□ -0.51
VRK3-210ENST00000596121 KCNK16Q96T55 309 aa11.87□□□□□ -0.51
VRK3-210ENST00000596121 SLC46A2Q9BY10 475 aa11.87□□□□□ -0.51
VRK3-210ENST00000596121 ATXN3LQ9H3M9 355 aa11.87□□□□□ -0.51
VRK3-210ENST00000596121 TMEM63CQ9P1W3 806 aa11.87□□□□□ -0.51
VRK3-210ENST00000596121 PTPRDP23468 1912 aa11.87□□□□□ -0.51
VRK3-210ENST00000596121 TMEM221A6NGB7 291 aa11.86□□□□□ -0.51
VRK3-210ENST00000596121 F8VP50 259 aa11.86□□□□□ -0.51
VRK3-210ENST00000596121 GOLGA6L22H0YM25 854 aa11.86□□□□□ -0.51
VRK3-210ENST00000596121 M0R296 226 aa11.86□□□□□ -0.51
VRK3-210ENST00000596121 BEST1O76090 585 aa11.86□□□□□ -0.51
VRK3-210ENST00000596121 GNA14O95837 355 aa11.86□□□□□ -0.51
VRK3-210ENST00000596121 P4HA1P13674 534 aa11.86□□□□□ -0.51
VRK3-210ENST00000596121 ERCC5P28715 1186 aaPredicted RBP11.86□□□□□ -0.51
VRK3-210ENST00000596121 GRIK1P39086 918 aa11.86□□□□□ -0.51
VRK3-210ENST00000596121 RAD23BP54727 409 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms