RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 CACNA1IQ9P0X4 2223 aa18.25■□□□□ 0.51
CCDC9-202ENST00000595659 LILRB5O75023 590 aa18.25■□□□□ 0.51
CCDC9-202ENST00000595659 TADA3O75528 432 aa18.25■□□□□ 0.51
CCDC9-202ENST00000595659 CST3P01034 146 aaPredicted RBP18.25■□□□□ 0.51
CCDC9-202ENST00000595659 TNNI1P19237 187 aa18.25■□□□□ 0.51
CCDC9-202ENST00000595659 PCSK1P29120 753 aa18.25■□□□□ 0.51
CCDC9-202ENST00000595659 CCR3P51677 355 aa18.25■□□□□ 0.51
CCDC9-202ENST00000595659 DNM1Q05193 864 aaKnown RBP18.25■□□□□ 0.51
CCDC9-202ENST00000595659 DMWDQ09019 674 aa18.25■□□□□ 0.51
CCDC9-202ENST00000595659 LRRC32Q14392 662 aa18.25■□□□□ 0.51
CCDC9-202ENST00000595659 CNNM4Q6P4Q7 775 aa18.25■□□□□ 0.51
CCDC9-202ENST00000595659 TRAPPC11Q7Z392 1133 aa18.25■□□□□ 0.51
CCDC9-202ENST00000595659 WDR49Q8IV35 697 aa18.25■□□□□ 0.51
CCDC9-202ENST00000595659 RIN3Q8TB24 985 aa18.25■□□□□ 0.51
CCDC9-202ENST00000595659 MSANTD3Q96H12 275 aa18.25■□□□□ 0.51
CCDC9-202ENST00000595659 CYP2S1Q96SQ9 504 aa18.25■□□□□ 0.51
CCDC9-202ENST00000595659 SYT15Q9BQS2 421 aa18.25■□□□□ 0.51
CCDC9-202ENST00000595659 KIAA1586Q9HCI6 787 aa18.25■□□□□ 0.51
CCDC9-202ENST00000595659 ABCB6Q9NP58 842 aa18.25■□□□□ 0.51
CCDC9-202ENST00000595659 FAM13BQ9NYF5 915 aa18.25■□□□□ 0.51
CCDC9-202ENST00000595659 SMG5Q9UPR3 1016 aaKnown RBP18.25■□□□□ 0.51
CCDC9-202ENST00000595659 ANK1P16157 1881 aa18.24■□□□□ 0.51
CCDC9-202ENST00000595659 OTOL1A6NHN0 477 aaPredicted RBP18.24■□□□□ 0.51
CCDC9-202ENST00000595659 NOL4O94818 638 aa18.24■□□□□ 0.51
CCDC9-202ENST00000595659 ARSAP15289 507 aa18.24■□□□□ 0.51
CCDC9-202ENST00000595659 PLCB2Q00722 1185 aa18.24■□□□□ 0.51
CCDC9-202ENST00000595659 CYP24A1Q07973 514 aa18.24■□□□□ 0.51
CCDC9-202ENST00000595659 ITPRIPL2Q3MIP1 535 aa18.24■□□□□ 0.51
CCDC9-202ENST00000595659 RESP18Q5W5W9 173 aa18.24■□□□□ 0.51
CCDC9-202ENST00000595659 HEATR6Q6AI08 1181 aaKnown RBP18.24■□□□□ 0.51
CCDC9-202ENST00000595659 FAM171BQ6P995 826 aa18.24■□□□□ 0.51
CCDC9-202ENST00000595659 MAMSTRQ6ZN01 415 aa18.24■□□□□ 0.51
CCDC9-202ENST00000595659 MON1AQ86VX9 555 aa18.24■□□□□ 0.51
CCDC9-202ENST00000595659 MYLPFQ96A32 169 aa18.24■□□□□ 0.51
CCDC9-202ENST00000595659 FNBP1Q96RU3 617 aa18.24■□□□□ 0.51
CCDC9-202ENST00000595659 SLC22A12Q96S37 553 aa18.24■□□□□ 0.51
CCDC9-202ENST00000595659 FAM83CQ9BQN1 747 aa18.24■□□□□ 0.51
CCDC9-202ENST00000595659 MRPL45Q9BRJ2 306 aaKnown RBP18.24■□□□□ 0.51
CCDC9-202ENST00000595659 EPC1Q9H2F5 836 aa18.24■□□□□ 0.51
CCDC9-202ENST00000595659 CRTAC1Q9NQ79 661 aa18.24■□□□□ 0.51
CCDC9-202ENST00000595659 HPS4Q9NQG7 708 aa18.24■□□□□ 0.51
CCDC9-202ENST00000595659 TDP1Q9NUW8 608 aa18.24■□□□□ 0.51
CCDC9-202ENST00000595659 SERTAD1Q9UHV2 236 aa18.24■□□□□ 0.51
CCDC9-202ENST00000595659 CHURC1-FNTBB4DL54 471 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 BDNFP23560 247 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 DDX6P26196 483 aaKnown RBP eCLIP18.23■□□□□ 0.51
CCDC9-202ENST00000595659 FNTBP49356 437 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 CASP4P49662 377 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 NRLP54845 237 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 CYP27A1Q02318 531 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 EHHADHQ08426 723 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 RUNX3Q13761 415 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 PPP2R5DQ14738 602 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 CFAP221Q4G0U5 840 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 C1orf228Q6PIY5 440 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 DPH6Q7L8W6 267 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 LIMS2Q7Z4I7 341 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 SPEM1Q8N4L4 309 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 XXYLT1Q8NBI6 393 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 ZNF516Q92618 1163 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 CHAMP1Q96JM3 812 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 IER2Q9BTL4 223 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 MAGEF1Q9HAY2 307 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 MAGEC2Q9UBF1 373 aaPredicted RBP18.23■□□□□ 0.51
CCDC9-202ENST00000595659 CDH9Q9ULB4 789 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 NME7Q9Y5B8 376 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 MIA3Q5JRA6 1907 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 COL4A2P08572 1712 aa18.23■□□□□ 0.51
CCDC9-202ENST00000595659 TICRRQ7Z2Z1 1910 aa18.22■□□□□ 0.51
CCDC9-202ENST00000595659 FAM186AA6NE01 2351 aa18.22■□□□□ 0.51
CCDC9-202ENST00000595659 GRIK1P39086 918 aa18.22■□□□□ 0.51
CCDC9-202ENST00000595659 SRSF5Q13243 272 aaKnown RBP18.22■□□□□ 0.51
CCDC9-202ENST00000595659 CCINQ13939 588 aa18.22■□□□□ 0.51
CCDC9-202ENST00000595659 PSMD6Q15008 389 aa18.22■□□□□ 0.51
CCDC9-202ENST00000595659 DGKKQ5KSL6 1271 aa18.22■□□□□ 0.51
CCDC9-202ENST00000595659 CC2D1AQ6P1N0 951 aaPredicted RBP18.22■□□□□ 0.51
CCDC9-202ENST00000595659 HS2ST1Q7LGA3 356 aa18.22■□□□□ 0.51
CCDC9-202ENST00000595659 ARL14EPQ8N8R7 260 aaPredicted RBP18.22■□□□□ 0.51
CCDC9-202ENST00000595659 OR6B3Q8NGW1 331 aa18.22■□□□□ 0.51
CCDC9-202ENST00000595659 SPATA18Q8TC71 538 aa18.22■□□□□ 0.51
CCDC9-202ENST00000595659 ELMO3Q96BJ8 720 aa18.22■□□□□ 0.51
CCDC9-202ENST00000595659 MYRFLQ96LU7 910 aa18.22■□□□□ 0.51
CCDC9-202ENST00000595659 CGRRF1Q99675 332 aa18.22■□□□□ 0.51
CCDC9-202ENST00000595659 FAM126AQ9BYI3 521 aaPredicted RBP18.22■□□□□ 0.51
CCDC9-202ENST00000595659 GZF1Q9H116 711 aaPredicted RBP18.22■□□□□ 0.51
CCDC9-202ENST00000595659 UXTQ9UBK9 157 aaPredicted RBP18.22■□□□□ 0.51
CCDC9-202ENST00000595659 ZMYM5Q9UJ78 669 aa18.22■□□□□ 0.51
CCDC9-202ENST00000595659 FRYLO94915 3013 aa18.22■□□□□ 0.51
CCDC9-202ENST00000595659 WDR87Q6ZQQ6 2873 aa18.21■□□□□ 0.51
CCDC9-202ENST00000595659 C2orf78A6NCI8 922 aa18.21■□□□□ 0.51
CCDC9-202ENST00000595659 CKMP06732 381 aa18.21■□□□□ 0.51
CCDC9-202ENST00000595659 WARSP23381 471 aaKnown RBP18.21■□□□□ 0.51
CCDC9-202ENST00000595659 GNL1P36915 607 aaPredicted RBP18.21■□□□□ 0.51
CCDC9-202ENST00000595659 USP46P62068 366 aa18.21■□□□□ 0.51
CCDC9-202ENST00000595659 KNOP1Q1ED39 458 aaKnown RBP18.21■□□□□ 0.51
CCDC9-202ENST00000595659 MDH1BQ5I0G3 518 aa18.21■□□□□ 0.51
CCDC9-202ENST00000595659 NAIF1Q69YI7 327 aaPredicted RBP18.21■□□□□ 0.51
CCDC9-202ENST00000595659 PKN3Q6P5Z2 889 aa18.21■□□□□ 0.51
CCDC9-202ENST00000595659 C4orf50Q6ZRC1 276 aa18.21■□□□□ 0.51
CCDC9-202ENST00000595659 PRR23BQ6ZRT6 265 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms