RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 ITGB3P05106 788 aa20.02■□□□□ 0.8
PDE4C-208ENST00000595343 ACAT1P24752 427 aaKnown RBP20.02■□□□□ 0.8
PDE4C-208ENST00000595343 POLR2BP30876 1174 aaKnown RBP20.02■□□□□ 0.8
PDE4C-208ENST00000595343 RPL10AP62906 217 aaKnown RBP20.02■□□□□ 0.8
PDE4C-208ENST00000595343 TFAMQ00059 246 aaKnown RBP20.02■□□□□ 0.8
PDE4C-208ENST00000595343 FAM160A1Q05DH4 1040 aa20.02■□□□□ 0.8
PDE4C-208ENST00000595343 INTS6LQ5JSJ4 861 aaKnown RBP20.02■□□□□ 0.8
PDE4C-208ENST00000595343 SYT13Q7L8C5 426 aa20.02■□□□□ 0.8
PDE4C-208ENST00000595343 DYMQ7RTS9 669 aa20.02■□□□□ 0.8
PDE4C-208ENST00000595343 CPA6Q8N4T0 437 aa20.02■□□□□ 0.8
PDE4C-208ENST00000595343 C1orf127Q8N9H9 656 aa20.02■□□□□ 0.8
PDE4C-208ENST00000595343 RPLP0P6Q8NHW5 317 aa20.02■□□□□ 0.8
PDE4C-208ENST00000595343 EZH1Q92800 747 aaPredicted RBP20.02■□□□□ 0.8
PDE4C-208ENST00000595343 EXOC4Q96A65 974 aa20.02■□□□□ 0.8
PDE4C-208ENST00000595343 TRMT2BQ96GJ1 504 aaKnown RBP20.02■□□□□ 0.8
PDE4C-208ENST00000595343 MYRFLQ96LU7 910 aa20.02■□□□□ 0.8
PDE4C-208ENST00000595343 SLC22A12Q96S37 553 aa20.02■□□□□ 0.8
PDE4C-208ENST00000595343 CYP2S1Q96SQ9 504 aa20.02■□□□□ 0.8
PDE4C-208ENST00000595343 PKMYT1Q99640 499 aa20.02■□□□□ 0.8
PDE4C-208ENST00000595343 FAM213AQ9BRX8 229 aa20.02■□□□□ 0.8
PDE4C-208ENST00000595343 STRA6Q9BX79 667 aa20.02■□□□□ 0.8
PDE4C-208ENST00000595343 DUSP15Q9H1R2 295 aaPredicted RBP20.02■□□□□ 0.8
PDE4C-208ENST00000595343 VPS45Q9NRW7 570 aa20.02■□□□□ 0.8
PDE4C-208ENST00000595343 DUS2Q9NX74 493 aaKnown RBP20.02■□□□□ 0.8
PDE4C-208ENST00000595343 AGAP1Q9UPQ3 857 aa20.02■□□□□ 0.8
PDE4C-208ENST00000595343 TULP1O00294 542 aaPredicted RBP20.01■□□□□ 0.79
PDE4C-208ENST00000595343 HUS1O60921 280 aa20.01■□□□□ 0.79
PDE4C-208ENST00000595343 SHC2P98077 582 aa20.01■□□□□ 0.79
PDE4C-208ENST00000595343 KCNA1Q09470 495 aa20.01■□□□□ 0.79
PDE4C-208ENST00000595343 SF3A1Q15459 793 aaKnown RBP20.01■□□□□ 0.79
PDE4C-208ENST00000595343 ZNF77Q15935 545 aa20.01■□□□□ 0.79
PDE4C-208ENST00000595343 C8orf34Q49A92 452 aa20.01■□□□□ 0.79
PDE4C-208ENST00000595343 TMEM86AQ8N2M4 240 aa20.01■□□□□ 0.79
PDE4C-208ENST00000595343 TTC16Q8NEE8 873 aa20.01■□□□□ 0.79
PDE4C-208ENST00000595343 ZSWIM2Q8NEG5 633 aa20.01■□□□□ 0.79
PDE4C-208ENST00000595343 OSCP1Q8WVF1 389 aa20.01■□□□□ 0.79
PDE4C-208ENST00000595343 CD101Q93033 1021 aa20.01■□□□□ 0.79
PDE4C-208ENST00000595343 LSM14BQ9BX40 385 aaKnown RBP20.01■□□□□ 0.79
PDE4C-208ENST00000595343 TMEM206Q9H813 350 aa20.01■□□□□ 0.79
PDE4C-208ENST00000595343 TRPC7Q9HCX4 862 aa20.01■□□□□ 0.79
PDE4C-208ENST00000595343 GTF3C4Q9UKN8 822 aa20.01■□□□□ 0.79
PDE4C-208ENST00000595343 CFAP47Q6ZTR5 3102 aa20■□□□□ 0.79
PDE4C-208ENST00000595343 DCLK1O15075 740 aa20■□□□□ 0.79
PDE4C-208ENST00000595343 CD2BP2O95400 341 aaKnown RBP20■□□□□ 0.79
PDE4C-208ENST00000595343 APBB3O95704 486 aa20■□□□□ 0.79
PDE4C-208ENST00000595343 USP17L7P0C7H9 530 aa20■□□□□ 0.79
PDE4C-208ENST00000595343 MYL7Q01449 175 aa20■□□□□ 0.79
PDE4C-208ENST00000595343 USP4Q13107 963 aa20■□□□□ 0.79
PDE4C-208ENST00000595343 DMC1Q14565 340 aa20■□□□□ 0.79
PDE4C-208ENST00000595343 ELF2Q15723 593 aa20■□□□□ 0.79
PDE4C-208ENST00000595343 CCDC142Q17RM4 750 aa20■□□□□ 0.79
PDE4C-208ENST00000595343 SCARA3Q6AZY7 606 aa20■□□□□ 0.79
PDE4C-208ENST00000595343 TCEAL6Q6IPX3 200 aa20■□□□□ 0.79
PDE4C-208ENST00000595343 BRAPQ7Z569 592 aa20■□□□□ 0.79
PDE4C-208ENST00000595343 BRSK2Q8IWQ3 736 aa20■□□□□ 0.79
PDE4C-208ENST00000595343 CACTINQ8WUQ7 758 aaKnown RBP20■□□□□ 0.79
PDE4C-208ENST00000595343 ATP2A3Q93084 1043 aa20■□□□□ 0.79
PDE4C-208ENST00000595343 TCEAL3Q969E4 200 aa20■□□□□ 0.79
PDE4C-208ENST00000595343 SAAL1Q96ER3 474 aa20■□□□□ 0.79
PDE4C-208ENST00000595343 EPSTI1Q96J88 318 aa20■□□□□ 0.79
PDE4C-208ENST00000595343 MRPL44Q9H9J2 332 aaKnown RBP20■□□□□ 0.79
PDE4C-208ENST00000595343 EBF1Q9UH73 591 aa20■□□□□ 0.79
PDE4C-208ENST00000595343 EXOC7Q9UPT5 735 aa20■□□□□ 0.79
PDE4C-208ENST00000595343 SMC3Q9UQE7 1217 aa20■□□□□ 0.79
PDE4C-208ENST00000595343 WNT6Q9Y6F9 365 aa20■□□□□ 0.79
PDE4C-208ENST00000595343 TRAV19A0A0A6YYK7 116 aa19.99■□□□□ 0.79
PDE4C-208ENST00000595343 KCNK5O95279 499 aa19.99■□□□□ 0.79
PDE4C-208ENST00000595343 CKMP06732 381 aa19.99■□□□□ 0.79
PDE4C-208ENST00000595343 IFNAR2P48551 515 aa19.99■□□□□ 0.79
PDE4C-208ENST00000595343 EML3Q32P44 896 aa19.99■□□□□ 0.79
PDE4C-208ENST00000595343 CFAP221Q4G0U5 840 aa19.99■□□□□ 0.79
PDE4C-208ENST00000595343 L1TD1Q5T7N2 865 aaKnown RBP19.99■□□□□ 0.79
PDE4C-208ENST00000595343 LARP1BQ659C4 914 aaKnown RBP19.99■□□□□ 0.79
PDE4C-208ENST00000595343 RNF43Q68DV7 783 aa19.99■□□□□ 0.79
PDE4C-208ENST00000595343 USP49Q70CQ1 688 aa19.99■□□□□ 0.79
PDE4C-208ENST00000595343 OSTM1Q86WC4 334 aa19.99■□□□□ 0.79
PDE4C-208ENST00000595343 CSGALNACT2Q8N6G5 542 aa19.99■□□□□ 0.79
PDE4C-208ENST00000595343 LRRC52Q8N7C0 313 aa19.99■□□□□ 0.79
PDE4C-208ENST00000595343 CXorf38Q8TB03 319 aa19.99■□□□□ 0.79
PDE4C-208ENST00000595343 ACDQ96AP0 544 aa19.99■□□□□ 0.79
PDE4C-208ENST00000595343 FAM84AQ96KN4 292 aa19.99■□□□□ 0.79
PDE4C-208ENST00000595343 ACCSQ96QU6 501 aa19.99■□□□□ 0.79
PDE4C-208ENST00000595343 GDAP2Q9NXN4 497 aa19.99■□□□□ 0.79
PDE4C-208ENST00000595343 TBC1D7Q9P0N9 293 aa19.99■□□□□ 0.79
PDE4C-208ENST00000595343 SEL1LQ9UBV2 794 aa19.99■□□□□ 0.79
PDE4C-208ENST00000595343 HCRTO43612 131 aa19.98■□□□□ 0.79
PDE4C-208ENST00000595343 RHOBTB1O94844 696 aa19.98■□□□□ 0.79
PDE4C-208ENST00000595343 CREB5Q02930 508 aa19.98■□□□□ 0.79
PDE4C-208ENST00000595343 PSMD2Q13200 908 aa19.98■□□□□ 0.79
PDE4C-208ENST00000595343 SPATA2LQ8IUW3 424 aaPredicted RBP19.98■□□□□ 0.79
PDE4C-208ENST00000595343 ARL14EPQ8N8R7 260 aaPredicted RBP19.98■□□□□ 0.79
PDE4C-208ENST00000595343 SPATA18Q8TC71 538 aa19.98■□□□□ 0.79
PDE4C-208ENST00000595343 RBAKQ9NYW8 714 aaPredicted RBP19.98■□□□□ 0.79
PDE4C-208ENST00000595343 GCNT4Q9P109 453 aa19.98■□□□□ 0.79
PDE4C-208ENST00000595343 STK17AQ9UEE5 414 aa19.98■□□□□ 0.79
PDE4C-208ENST00000595343 ITGA11Q9UKX5 1188 aa19.98■□□□□ 0.79
PDE4C-208ENST00000595343 SNX9Q9Y5X1 595 aa19.98■□□□□ 0.79
PDE4C-208ENST00000595343 LAMA1P25391 3075 aa19.97■□□□□ 0.79
PDE4C-208ENST00000595343 C2orf78A6NCI8 922 aa19.97■□□□□ 0.79
PDE4C-208ENST00000595343 MYMKA6NI61 221 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms