RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 KMT2EQ8IZD2 1858 aa15.77■□□□□ 0.11
USE1-205ENST00000594724 ZNF318Q5VUA4 2279 aa15.77■□□□□ 0.11
USE1-205ENST00000594724 HEPACAM2A8MVW5 462 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 A8MXQ7 604 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 HLA-DRAP01903 254 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 CSH1P0DML2 217 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 CSH2P0DML3 217 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 KRT13P13646 458 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 PTPN1P18031 435 aaKnown RBP15.76■□□□□ 0.11
USE1-205ENST00000594724 CDC25CP30307 473 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 GCLMP48507 274 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 TCF15Q12870 199 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 SGSM1Q2NKQ1 1148 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 ARHGAP15Q53QZ3 475 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 MDH1BQ5I0G3 518 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 SPOPLQ6IQ16 392 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 C4orf50Q6ZRC1 276 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 TMEM150AQ86TG1 271 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 MYCBPAPQ8TBZ2 947 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 PCED1BQ96HM7 432 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 FUBP3Q96I24 572 aaKnown RBP eCLIP15.76■□□□□ 0.11
USE1-205ENST00000594724 SDCBP2Q9H190 292 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 TASP1Q9H6P5 420 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 BRD9Q9H8M2 597 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 TRPV4Q9HBA0 871 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 CHMP5Q9NZZ3 219 aa15.76■□□□□ 0.11
USE1-205ENST00000594724 SLC38A8A6NNN8 435 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 KINO60870 393 aaKnown RBP15.75■□□□□ 0.11
USE1-205ENST00000594724 F11P03951 625 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 PSMC3P17980 439 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 CD72P21854 359 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 GDI1P31150 447 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 GRIK1P39086 918 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 MAGEA11P43364 429 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 PMS1P54277 932 aaKnown RBP15.75■□□□□ 0.11
USE1-205ENST00000594724 NLRP12P59046 1061 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 STARD6P59095 220 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 PFKPQ01813 784 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 PPP3CAQ08209 521 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 MAPRE1Q15691 268 aaKnown RBP15.75■□□□□ 0.11
USE1-205ENST00000594724 MLF2Q15773 248 aaPredicted RBP15.75■□□□□ 0.11
USE1-205ENST00000594724 EDRF1Q3B7T1 1238 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 ANKRD40Q6AI12 368 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 PHLDB3Q6NSJ2 640 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 INTS8Q75QN2 995 aaKnown RBP15.75■□□□□ 0.11
USE1-205ENST00000594724 MFSD6LQ8IWD5 586 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 LRRC3BQ96PB8 259 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 GCNAQ96QF7 691 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 PRRX2Q99811 253 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 SLC46A2Q9BY10 475 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 FOXQ1Q9C009 403 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 HEBP1Q9NRV9 189 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 MAN1B1Q9UKM7 699 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 COL4A3Q01955 1670 aa15.75■□□□□ 0.11
USE1-205ENST00000594724 ZDBF2Q9HCK1 2354 aa15.74■□□□□ 0.11
USE1-205ENST00000594724 TRIM49BA6NDI0 452 aa15.74■□□□□ 0.11
USE1-205ENST00000594724 H0Y858 1186 aa15.74■□□□□ 0.11
USE1-205ENST00000594724 CETN3O15182 167 aa15.74■□□□□ 0.11
USE1-205ENST00000594724 GALR2O43603 387 aaPredicted RBP15.74■□□□□ 0.11
USE1-205ENST00000594724 LRRN2O75325 713 aa15.74■□□□□ 0.11
USE1-205ENST00000594724 DCNP07585 359 aaKnown RBP15.74■□□□□ 0.11
USE1-205ENST00000594724 PIK3CAP42336 1068 aa15.74■□□□□ 0.11
USE1-205ENST00000594724 NHLH1Q02575 133 aa15.74■□□□□ 0.11
USE1-205ENST00000594724 COBLL1Q53SF7 1204 aa15.74■□□□□ 0.11
USE1-205ENST00000594724 ELOA2Q8IYF1 753 aaPredicted RBP15.74■□□□□ 0.11
USE1-205ENST00000594724 ADSSL1Q8N142 457 aa15.74■□□□□ 0.11
USE1-205ENST00000594724 MAB21L3Q8N8X9 362 aa15.74■□□□□ 0.11
USE1-205ENST00000594724 TAS1R2Q8TE23 839 aa15.74■□□□□ 0.11
USE1-205ENST00000594724 SHDQ96IW2 340 aa15.74■□□□□ 0.11
USE1-205ENST00000594724 B3GNT5Q9BYG0 378 aa15.74■□□□□ 0.11
USE1-205ENST00000594724 SMG9Q9H0W8 520 aaKnown RBP15.74■□□□□ 0.11
USE1-205ENST00000594724 SIT1Q9Y3P8 196 aa15.74■□□□□ 0.11
USE1-205ENST00000594724 CLDN5O00501 218 aa15.73■□□□□ 0.11
USE1-205ENST00000594724 DPYSL4O14531 572 aa15.73■□□□□ 0.11
USE1-205ENST00000594724 ZNF263O14978 683 aa15.73■□□□□ 0.11
USE1-205ENST00000594724 NOL4O94818 638 aa15.73■□□□□ 0.11
USE1-205ENST00000594724 PRAMEF12O95522 483 aa15.73■□□□□ 0.11
USE1-205ENST00000594724 ASS1P00966 412 aaKnown RBP15.73■□□□□ 0.11
USE1-205ENST00000594724 EPB41P11171 864 aaKnown RBP15.73■□□□□ 0.11
USE1-205ENST00000594724 CD44P16070 742 aaKnown RBP15.73■□□□□ 0.11
USE1-205ENST00000594724 CACNA2D1P54289 1103 aa15.73■□□□□ 0.11
USE1-205ENST00000594724 PTPN5P54829 565 aa15.73■□□□□ 0.11
USE1-205ENST00000594724 PRKCQQ04759 706 aa15.73■□□□□ 0.11
USE1-205ENST00000594724 TXNDC8Q6A555 127 aa15.73■□□□□ 0.11
USE1-205ENST00000594724 VSTM1Q6UX27 236 aa15.73■□□□□ 0.11
USE1-205ENST00000594724 TPRG1Q6ZUI0 275 aa15.73■□□□□ 0.11
USE1-205ENST00000594724 B3GALNT2Q8NCR0 500 aa15.73■□□□□ 0.11
USE1-205ENST00000594724 DEPDC1BQ8WUY9 529 aa15.73■□□□□ 0.11
USE1-205ENST00000594724 IRF7Q92985 503 aa15.73■□□□□ 0.11
USE1-205ENST00000594724 E2F7Q96AV8 911 aa15.73■□□□□ 0.11
USE1-205ENST00000594724 MYRFLQ96LU7 910 aa15.73■□□□□ 0.11
USE1-205ENST00000594724 TSG101Q99816 390 aa15.73■□□□□ 0.11
USE1-205ENST00000594724 APOBEC3GQ9HC16 384 aaKnown RBP15.73■□□□□ 0.11
USE1-205ENST00000594724 MTF2Q9Y483 593 aaPredicted RBP15.73■□□□□ 0.11
USE1-205ENST00000594724 KANSL1LA0AUZ9 987 aa15.72■□□□□ 0.11
USE1-205ENST00000594724 F8VP50 259 aa15.72■□□□□ 0.11
USE1-205ENST00000594724 BIN1O00499 593 aa15.72■□□□□ 0.11
USE1-205ENST00000594724 TADA3O75528 432 aa15.72■□□□□ 0.11
USE1-205ENST00000594724 P4HA1P13674 534 aa15.72■□□□□ 0.11
USE1-205ENST00000594724 ANP32AP39687 249 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms