RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 NCOA4Q13772 614 aa16.24■□□□□ 0.19
ERCC1-213ENST00000592023 UBXN2BQ14CS0 331 aa16.24■□□□□ 0.19
ERCC1-213ENST00000592023 MDH1BQ5I0G3 518 aa16.24■□□□□ 0.19
ERCC1-213ENST00000592023 FAM171BQ6P995 826 aa16.24■□□□□ 0.19
ERCC1-213ENST00000592023 ARID3BQ8IVW6 561 aaPredicted RBP16.24■□□□□ 0.19
ERCC1-213ENST00000592023 YAF2Q8IY57 180 aa16.24■□□□□ 0.19
ERCC1-213ENST00000592023 DTWD2Q8NBA8 298 aa16.24■□□□□ 0.19
ERCC1-213ENST00000592023 ENGASEQ8NFI3 743 aa16.24■□□□□ 0.19
ERCC1-213ENST00000592023 TMC2Q8TDI7 906 aa16.24■□□□□ 0.19
ERCC1-213ENST00000592023 ERCC4Q92889 916 aaPredicted RBP16.24■□□□□ 0.19
ERCC1-213ENST00000592023 PHOX2BQ99453 314 aa16.24■□□□□ 0.19
ERCC1-213ENST00000592023 DPEP3Q9H4B8 488 aa16.24■□□□□ 0.19
ERCC1-213ENST00000592023 SIT1Q9Y3P8 196 aa16.24■□□□□ 0.19
ERCC1-213ENST00000592023 KANSL1LA0AUZ9 987 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 SLC38A8A6NNN8 435 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 DPYSL4O14531 572 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 ZNF263O14978 683 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 AKAP3O75969 853 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 TRIM49P0CI25 452 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 TRIM49CP0CI26 452 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 CD72P21854 359 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 PIK3CAP42336 1068 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 RAP1GAPP47736 663 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 NLRP12P59046 1061 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 MAPRE1Q15691 268 aaKnown RBP16.23■□□□□ 0.19
ERCC1-213ENST00000592023 NFIL3Q16649 462 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 ZACNQ401N2 412 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 ZCWPW2Q504Y3 356 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 ZNF667Q5HYK9 610 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 TMEM150AQ86TG1 271 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 FAM186BQ8IYM0 893 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 ATOH1Q92858 354 aaPredicted RBP16.23■□□□□ 0.19
ERCC1-213ENST00000592023 IRF7Q92985 503 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 E2F7Q96AV8 911 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 PCED1BQ96HM7 432 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 DDX23Q9BUQ8 820 aaKnown RBP16.23■□□□□ 0.19
ERCC1-213ENST00000592023 SMG9Q9H0W8 520 aaKnown RBP16.23■□□□□ 0.19
ERCC1-213ENST00000592023 TASP1Q9H6P5 420 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 RMND1Q9NWS8 449 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 MAGEC2Q9UBF1 373 aaPredicted RBP16.23■□□□□ 0.19
ERCC1-213ENST00000592023 DENND4CQ5VZ89 1909 aa16.23■□□□□ 0.19
ERCC1-213ENST00000592023 A8MXQ7 604 aa16.22■□□□□ 0.19
ERCC1-213ENST00000592023 TADA3O75528 432 aa16.22■□□□□ 0.19
ERCC1-213ENST00000592023 NOL4O94818 638 aa16.22■□□□□ 0.19
ERCC1-213ENST00000592023 F11P03951 625 aa16.22■□□□□ 0.19
ERCC1-213ENST00000592023 BDNFP23560 247 aa16.22■□□□□ 0.19
ERCC1-213ENST00000592023 RPL13P26373 211 aaKnown RBP16.22■□□□□ 0.19
ERCC1-213ENST00000592023 HOXD11P31277 338 aaPredicted RBP16.22■□□□□ 0.19
ERCC1-213ENST00000592023 GNL1P36915 607 aaPredicted RBP16.22■□□□□ 0.19
ERCC1-213ENST00000592023 MAGEA11P43364 429 aa16.22■□□□□ 0.19
ERCC1-213ENST00000592023 VAMP7P51809 220 aa16.22■□□□□ 0.19
ERCC1-213ENST00000592023 C1orf220Q5T0J3 134 aa16.22■□□□□ 0.19
ERCC1-213ENST00000592023 SV2AQ7L0J3 742 aa16.22■□□□□ 0.19
ERCC1-213ENST00000592023 ALYREFQ86V81 257 aaKnown RBP16.22■□□□□ 0.19
ERCC1-213ENST00000592023 MFSD6LQ8IWD5 586 aa16.22■□□□□ 0.19
ERCC1-213ENST00000592023 MYCBPAPQ8TBZ2 947 aa16.22■□□□□ 0.19
ERCC1-213ENST00000592023 MMRN2Q9H8L6 949 aa16.22■□□□□ 0.19
ERCC1-213ENST00000592023 VRTNQ9H8Y1 702 aa16.22■□□□□ 0.19
ERCC1-213ENST00000592023 LTB4R2Q9NPC1 389 aa16.22■□□□□ 0.19
ERCC1-213ENST00000592023 KIF26AQ9ULI4 1882 aaPredicted RBP16.21■□□□□ 0.19
ERCC1-213ENST00000592023 MAPK13O15264 365 aa16.21■□□□□ 0.19
ERCC1-213ENST00000592023 SMC2O95347 1197 aa16.21■□□□□ 0.19
ERCC1-213ENST00000592023 KRT13P13646 458 aa16.21■□□□□ 0.19
ERCC1-213ENST00000592023 GLULP15104 373 aa16.21■□□□□ 0.19
ERCC1-213ENST00000592023 TARSP26639 723 aaKnown RBP16.21■□□□□ 0.19
ERCC1-213ENST00000592023 ANXA13P27216 316 aa16.21■□□□□ 0.19
ERCC1-213ENST00000592023 PSMC2P35998 433 aaKnown RBP16.21■□□□□ 0.19
ERCC1-213ENST00000592023 GRIK1P39086 918 aa16.21■□□□□ 0.19
ERCC1-213ENST00000592023 GCLMP48507 274 aa16.21■□□□□ 0.19
ERCC1-213ENST00000592023 MRE11P49959 708 aa16.21■□□□□ 0.19
ERCC1-213ENST00000592023 CDH8P55286 799 aa16.21■□□□□ 0.19
ERCC1-213ENST00000592023 ADAM9Q13443 819 aa16.21■□□□□ 0.19
ERCC1-213ENST00000592023 ANGPT1Q15389 498 aa16.21■□□□□ 0.19
ERCC1-213ENST00000592023 INTS8Q75QN2 995 aaKnown RBP16.21■□□□□ 0.19
ERCC1-213ENST00000592023 MAB21L3Q8N8X9 362 aa16.21■□□□□ 0.19
ERCC1-213ENST00000592023 MRPS31Q92665 395 aaKnown RBP16.21■□□□□ 0.19
ERCC1-213ENST00000592023 SMARCE1Q969G3 411 aa16.21■□□□□ 0.19
ERCC1-213ENST00000592023 EEF2KMTQ96G04 330 aa16.21■□□□□ 0.19
ERCC1-213ENST00000592023 TRMT2BQ96GJ1 504 aaKnown RBP16.21■□□□□ 0.19
ERCC1-213ENST00000592023 SLC46A2Q9BY10 475 aa16.21■□□□□ 0.19
ERCC1-213ENST00000592023 SDCBP2Q9H190 292 aa16.21■□□□□ 0.19
ERCC1-213ENST00000592023 IRF2BPLQ9H1B7 796 aa16.21■□□□□ 0.19
ERCC1-213ENST00000592023 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.21■□□□□ 0.19
ERCC1-213ENST00000592023 DLGAP2Q9P1A6 1054 aa16.21■□□□□ 0.19
ERCC1-213ENST00000592023 UXTQ9UBK9 157 aaPredicted RBP16.21■□□□□ 0.19
ERCC1-213ENST00000592023 MTF2Q9Y483 593 aaPredicted RBP16.21■□□□□ 0.19
ERCC1-213ENST00000592023 PATJQ8NI35 1801 aa16.2■□□□□ 0.18
ERCC1-213ENST00000592023 GREB1Q4ZG55 1949 aa16.2■□□□□ 0.18
ERCC1-213ENST00000592023 KINO60870 393 aaKnown RBP16.2■□□□□ 0.18
ERCC1-213ENST00000592023 HLA-DRAP01903 254 aa16.2■□□□□ 0.18
ERCC1-213ENST00000592023 PTPN1P18031 435 aaKnown RBP16.2■□□□□ 0.18
ERCC1-213ENST00000592023 AVPR1AP37288 418 aa16.2■□□□□ 0.18
ERCC1-213ENST00000592023 PRCPP42785 496 aa16.2■□□□□ 0.18
ERCC1-213ENST00000592023 FCHO2Q0JRZ9 810 aa16.2■□□□□ 0.18
ERCC1-213ENST00000592023 EDRF1Q3B7T1 1238 aa16.2■□□□□ 0.18
ERCC1-213ENST00000592023 ZNF658Q5TYW1 1059 aaPredicted RBP16.2■□□□□ 0.18
ERCC1-213ENST00000592023 TXNDC8Q6A555 127 aa16.2■□□□□ 0.18
ERCC1-213ENST00000592023 SPOPLQ6IQ16 392 aa16.2■□□□□ 0.18
ERCC1-213ENST00000592023 VSTM1Q6UX27 236 aa16.2■□□□□ 0.18
ERCC1-213ENST00000592023 CMTM8Q8IZV2 173 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms