RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 ZNF12P17014 697 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 PSMC2P35998 433 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 HNRNPDQ14103 355 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 DOK7Q18PE1 504 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 C15orf59Q2T9L4 293 aaPredicted RBP12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 TTC23LQ6PF05 361 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 ERLEC1Q96DZ1 483 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 THEGQ9P2T0 379 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 ATF5Q9Y2D1 282 aaPredicted RBP12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 FOXD2O60548 495 aaPredicted RBP12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 TSPAN1O60635 241 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 ANPEPP15144 967 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 NOVP48745 357 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 VCPP55072 806 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 ACAP1Q15027 740 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 DCAF6Q58WW2 860 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 PDZD8Q8NEN9 1154 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 OR6Y1Q8NGX8 325 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 CYP2W1Q8TAV3 490 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 RFFLQ8WZ73 363 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 AMNQ9BXJ7 453 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 VPS51Q9UID3 782 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 DBR1Q9UK59 544 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 EXOC7Q9UPT5 735 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 LZTS1Q9Y250 596 aa12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 HEMK1Q9Y5R4 338 aaPredicted RBP12.8□□□□□ -0.36
SMARCA4-217ENST00000591595 MCF2LO15068 1137 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 EXOC3O60645 756 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 HNRNPCL1O60812 293 aaKnown RBP12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 TRPA1O75762 1119 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 CSPG5O95196 566 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 SOX5P35711 763 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 PHKA2P46019 1235 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 SLC29A2Q14542 456 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 NIPAL1Q6NVV3 410 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 USP43Q70EL4 1123 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 MIER3Q7Z3K6 550 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 SCYL3Q8IZE3 742 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 CALML6Q8TD86 181 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 RRN3Q9NYV6 651 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 DIS3Q9Y2L1 958 aaKnown RBP12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 AK5Q9Y6K8 562 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 ASTN1O14525 1302 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 FAM86B1E9PN63 330 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 FAM86B2P0C5J1 330 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 SPATA31C1P0DKV0 1188 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 CES1P23141 567 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 STX2P32856 288 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 TSPY1Q01534 308 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 BTKQ06187 659 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 NFIAQ12857 509 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 RALGDSQ12967 914 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 PDK3Q15120 406 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 LLGL1Q15334 1064 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 TMEM63BQ5T3F8 832 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 ITIH5Q86UX2 942 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 CCDC25Q86WR0 208 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 FBXO11Q86XK2 927 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 LSMEM2Q8N112 164 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 CENPSQ8N2Z9 138 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 VMP1Q96GC9 406 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 OSBPL6Q9BZF3 934 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 KCNK9Q9NPC2 374 aa12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 CCDC177Q9NQR7 707 aaPredicted RBP12.79□□□□□ -0.36
SMARCA4-217ENST00000591595 IGKV6D-41A0A0C4DH26 115 aa12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 PIK3CDO00329 1044 aa12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 ARHGAP33O14559 1287 aa12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 CCDC22O60826 627 aa12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 GAS8O95995 478 aa12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 MYCP01106 439 aaPredicted RBP12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 UQCRBP14927 111 aa12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 RPS3AP61247 264 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 TBC1D10BQ4KMP7 808 aaPredicted RBP12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 TAF1BQ53T94 588 aaPredicted RBP12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 C15orf52Q6ZUT6 534 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 REM2Q8IYK8 340 aaPredicted RBP12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 LILRB1Q8NHL6 650 aaPredicted RBP12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 LNX1Q8TBB1 728 aaPredicted RBP12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 BRSK1Q8TDC3 778 aa12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 CYTH2Q99418 400 aa12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 SENP6Q9GZR1 1112 aaPredicted RBP12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 MEIS2O14770 477 aa12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 RASGRF2O14827 1237 aa12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 CLASP2O75122 1294 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 BAG2O95816 211 aa12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 CRYZL1O95825 349 aa12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 SERPINB2P05120 415 aa12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 FYNP06241 537 aa12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 AP3B2Q13367 1082 aa12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 PDAP1Q13442 181 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 ELMSAN1Q6PJG2 1045 aa12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 TRMT1LQ7Z2T5 733 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 ERI1Q8IV48 349 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 FAM178BQ8IXR5 827 aa12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 VPS52Q8N1B4 723 aa12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 NAV1Q8NEY1 1877 aa12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 EXD1Q8NHP7 514 aa12.78□□□□□ -0.36
SMARCA4-217ENST00000591595 EIF2AK1Q9BQI3 630 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms