RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 SMG9Q9H0W8 520 aaKnown RBP22.83■■□□□ 1.25
LRP3-202ENST00000590275 APOBEC3GQ9HC16 384 aaKnown RBP22.83■■□□□ 1.25
LRP3-202ENST00000590275 ZFP14Q9HCL3 533 aa22.83■■□□□ 1.25
LRP3-202ENST00000590275 HMGXB4Q9UGU5 601 aa22.83■■□□□ 1.25
LRP3-202ENST00000590275 FRMD4BQ9Y2L6 1034 aa22.83■■□□□ 1.25
LRP3-202ENST00000590275 MTF2Q9Y483 593 aaPredicted RBP22.83■■□□□ 1.25
LRP3-202ENST00000590275 SLC38A8A6NNN8 435 aa22.82■■□□□ 1.24
LRP3-202ENST00000590275 HEPACAM2A8MVW5 462 aa22.82■■□□□ 1.24
LRP3-202ENST00000590275 HLA-DRAP01903 254 aa22.82■■□□□ 1.24
LRP3-202ENST00000590275 GLULP15104 373 aa22.82■■□□□ 1.24
LRP3-202ENST00000590275 BDNFP23560 247 aa22.82■■□□□ 1.24
LRP3-202ENST00000590275 AP3M2P53677 418 aa22.82■■□□□ 1.24
LRP3-202ENST00000590275 NLRP12P59046 1061 aa22.82■■□□□ 1.24
LRP3-202ENST00000590275 TNNC1P63316 161 aa22.82■■□□□ 1.24
LRP3-202ENST00000590275 EDRF1Q3B7T1 1238 aa22.82■■□□□ 1.24
LRP3-202ENST00000590275 SLC44A4Q53GD3 710 aa22.82■■□□□ 1.24
LRP3-202ENST00000590275 ARID3BQ8IVW6 561 aaPredicted RBP22.82■■□□□ 1.24
LRP3-202ENST00000590275 RIN3Q8TB24 985 aa22.82■■□□□ 1.24
LRP3-202ENST00000590275 MYCBPAPQ8TBZ2 947 aa22.82■■□□□ 1.24
LRP3-202ENST00000590275 TAS1R2Q8TE23 839 aa22.82■■□□□ 1.24
LRP3-202ENST00000590275 SMARCE1Q969G3 411 aa22.82■■□□□ 1.24
LRP3-202ENST00000590275 SLITRK6Q9H5Y7 841 aa22.82■■□□□ 1.24
LRP3-202ENST00000590275 ARNTLO00327 626 aa22.81■■□□□ 1.24
LRP3-202ENST00000590275 CLDN5O00501 218 aa22.81■■□□□ 1.24
LRP3-202ENST00000590275 IKBKBO14920 756 aa22.81■■□□□ 1.24
LRP3-202ENST00000590275 NOL4O94818 638 aa22.81■■□□□ 1.24
LRP3-202ENST00000590275 ASS1P00966 412 aaKnown RBP22.81■■□□□ 1.24
LRP3-202ENST00000590275 FAM163BP0C2L3 166 aa22.81■■□□□ 1.24
LRP3-202ENST00000590275 PTPN1P18031 435 aaKnown RBP22.81■■□□□ 1.24
LRP3-202ENST00000590275 CD72P21854 359 aa22.81■■□□□ 1.24
LRP3-202ENST00000590275 PSMC2P35998 433 aaKnown RBP22.81■■□□□ 1.24
LRP3-202ENST00000590275 STARD6P59095 220 aa22.81■■□□□ 1.24
LRP3-202ENST00000590275 USP46P62068 366 aa22.81■■□□□ 1.24
LRP3-202ENST00000590275 NHLH1Q02575 133 aa22.81■■□□□ 1.24
LRP3-202ENST00000590275 ORC1Q13415 861 aa22.81■■□□□ 1.24
LRP3-202ENST00000590275 VEPH1Q14D04 833 aa22.81■■□□□ 1.24
LRP3-202ENST00000590275 SCN4BQ8IWT1 228 aa22.81■■□□□ 1.24
LRP3-202ENST00000590275 ELOA2Q8IYF1 753 aaPredicted RBP22.81■■□□□ 1.24
LRP3-202ENST00000590275 SEMA4DQ92854 862 aa22.81■■□□□ 1.24
LRP3-202ENST00000590275 FUBP3Q96I24 572 aaKnown RBP eCLIP22.81■■□□□ 1.24
LRP3-202ENST00000590275 DDX23Q9BUQ8 820 aaKnown RBP22.81■■□□□ 1.24
LRP3-202ENST00000590275 B3GNT5Q9BYG0 378 aa22.81■■□□□ 1.24
LRP3-202ENST00000590275 SNX25Q9H3E2 840 aa22.81■■□□□ 1.24
LRP3-202ENST00000590275 RMND1Q9NWS8 449 aa22.81■■□□□ 1.24
LRP3-202ENST00000590275 DLGAP2Q9P1A6 1054 aa22.81■■□□□ 1.24
LRP3-202ENST00000590275 MAGED2Q9UNF1 606 aaPredicted RBP22.81■■□□□ 1.24
LRP3-202ENST00000590275 MAGEA11P43364 429 aa22.8■■□□□ 1.24
LRP3-202ENST00000590275 ASPAP45381 313 aa22.8■■□□□ 1.24
LRP3-202ENST00000590275 CYP27A1Q02318 531 aa22.8■■□□□ 1.24
LRP3-202ENST00000590275 ZNF667Q5HYK9 610 aa22.8■■□□□ 1.24
LRP3-202ENST00000590275 PAQR9Q6ZVX9 377 aa22.8■■□□□ 1.24
LRP3-202ENST00000590275 INTS8Q75QN2 995 aaKnown RBP22.8■■□□□ 1.24
LRP3-202ENST00000590275 ZNF518BQ9C0D4 1074 aa22.8■■□□□ 1.24
LRP3-202ENST00000590275 KCNH6Q9H252 994 aa22.8■■□□□ 1.24
LRP3-202ENST00000590275 MMRN2Q9H8L6 949 aa22.8■■□□□ 1.24
LRP3-202ENST00000590275 HEBP1Q9NRV9 189 aa22.8■■□□□ 1.24
LRP3-202ENST00000590275 CHMP5Q9NZZ3 219 aa22.8■■□□□ 1.24
LRP3-202ENST00000590275 MAGEC2Q9UBF1 373 aaPredicted RBP22.8■■□□□ 1.24
LRP3-202ENST00000590275 SMC2O95347 1197 aa22.79■■□□□ 1.24
LRP3-202ENST00000590275 DCNP07585 359 aaKnown RBP22.79■■□□□ 1.24
LRP3-202ENST00000590275 MLF2Q15773 248 aaPredicted RBP22.79■■□□□ 1.24
LRP3-202ENST00000590275 TXNDC8Q6A555 127 aa22.79■■□□□ 1.24
LRP3-202ENST00000590275 PHLDB3Q6NSJ2 640 aa22.79■■□□□ 1.24
LRP3-202ENST00000590275 MFSD6LQ8IWD5 586 aa22.79■■□□□ 1.24
LRP3-202ENST00000590275 B3GALNT2Q8NCR0 500 aa22.79■■□□□ 1.24
LRP3-202ENST00000590275 MYRFLQ96LU7 910 aa22.79■■□□□ 1.24
LRP3-202ENST00000590275 TASP1Q9H6P5 420 aa22.79■■□□□ 1.24
LRP3-202ENST00000590275 CCL26Q9Y258 94 aa22.79■■□□□ 1.24
LRP3-202ENST00000590275 MYO15AQ9UKN7 3530 aa22.79■■□□□ 1.24
LRP3-202ENST00000590275 DMDP11532 3685 aa22.79■■□□□ 1.24
LRP3-202ENST00000590275 A8MXQ7 604 aa22.78■■□□□ 1.24
LRP3-202ENST00000590275 PPP1R3GB7ZBB8 358 aa22.78■■□□□ 1.24
LRP3-202ENST00000590275 GALR2O43603 387 aaPredicted RBP22.78■■□□□ 1.24
LRP3-202ENST00000590275 COL4A2P08572 1712 aa22.78■■□□□ 1.24
LRP3-202ENST00000590275 CSH1P0DML2 217 aa22.78■■□□□ 1.24
LRP3-202ENST00000590275 CSH2P0DML3 217 aa22.78■■□□□ 1.24
LRP3-202ENST00000590275 PSMC3P17980 439 aa22.78■■□□□ 1.24
LRP3-202ENST00000590275 RPL13P26373 211 aaKnown RBP22.78■■□□□ 1.24
LRP3-202ENST00000590275 GDI1P31150 447 aa22.78■■□□□ 1.24
LRP3-202ENST00000590275 PIK3CAP42336 1068 aa22.78■■□□□ 1.24
LRP3-202ENST00000590275 RPL10AP62906 217 aaKnown RBP22.78■■□□□ 1.24
LRP3-202ENST00000590275 SGSM1Q2NKQ1 1148 aa22.78■■□□□ 1.24
LRP3-202ENST00000590275 FAM122AQ96E09 287 aa22.78■■□□□ 1.24
LRP3-202ENST00000590275 TWNKQ96RR1 684 aa22.78■■□□□ 1.24
LRP3-202ENST00000590275 SLC22A12Q96S37 553 aa22.78■■□□□ 1.24
LRP3-202ENST00000590275 DUSP9Q99956 384 aaKnown RBP22.78■■□□□ 1.24
LRP3-202ENST00000590275 TRMT61BQ9BVS5 477 aaKnown RBP22.78■■□□□ 1.24
LRP3-202ENST00000590275 GPR88Q9GZN0 384 aa22.78■■□□□ 1.24
LRP3-202ENST00000590275 F8VP50 259 aa22.77■■□□□ 1.24
LRP3-202ENST00000590275 BIN1O00499 593 aa22.77■■□□□ 1.24
LRP3-202ENST00000590275 KINO60870 393 aaKnown RBP22.77■■□□□ 1.24
LRP3-202ENST00000590275 CDC25CP30307 473 aa22.77■■□□□ 1.24
LRP3-202ENST00000590275 FCHO2Q0JRZ9 810 aa22.77■■□□□ 1.24
LRP3-202ENST00000590275 MORC3Q14149 939 aa22.77■■□□□ 1.24
LRP3-202ENST00000590275 TAF12Q16514 161 aa22.77■■□□□ 1.24
LRP3-202ENST00000590275 C4orf50Q6ZRC1 276 aa22.77■■□□□ 1.24
LRP3-202ENST00000590275 ZNF687Q8N1G0 1237 aa22.77■■□□□ 1.24
LRP3-202ENST00000590275 MAB21L3Q8N8X9 362 aa22.77■■□□□ 1.24
LRP3-202ENST00000590275 TRMT2BQ96GJ1 504 aaKnown RBP22.77■■□□□ 1.24
LRP3-202ENST00000590275 CCDC34Q96HJ3 373 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms