RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 KINO60870 393 aaKnown RBP19.25■□□□□ 0.67
CIRBP-227ENST00000590188 FGF19O95750 216 aa19.25■□□□□ 0.67
CIRBP-227ENST00000590188 STAU1O95793 577 aaKnown RBP19.25■□□□□ 0.67
CIRBP-227ENST00000590188 DCNP07585 359 aaKnown RBP19.25■□□□□ 0.67
CIRBP-227ENST00000590188 KRT13P13646 458 aa19.25■□□□□ 0.67
CIRBP-227ENST00000590188 RPL13P26373 211 aaKnown RBP19.25■□□□□ 0.67
CIRBP-227ENST00000590188 GCLMP48507 274 aa19.25■□□□□ 0.67
CIRBP-227ENST00000590188 RPL10AP62906 217 aaKnown RBP19.25■□□□□ 0.67
CIRBP-227ENST00000590188 PFKPQ01813 784 aa19.25■□□□□ 0.67
CIRBP-227ENST00000590188 NHLH1Q02575 133 aa19.25■□□□□ 0.67
CIRBP-227ENST00000590188 NFIL3Q16649 462 aa19.25■□□□□ 0.67
CIRBP-227ENST00000590188 ZACNQ401N2 412 aa19.25■□□□□ 0.67
CIRBP-227ENST00000590188 ZCWPW2Q504Y3 356 aa19.25■□□□□ 0.67
CIRBP-227ENST00000590188 ZNF658Q5TYW1 1059 aaPredicted RBP19.25■□□□□ 0.67
CIRBP-227ENST00000590188 PCED1BQ96HM7 432 aa19.25■□□□□ 0.67
CIRBP-227ENST00000590188 TIGD1Q96MW7 591 aa19.25■□□□□ 0.67
CIRBP-227ENST00000590188 TRMT61BQ9BVS5 477 aaKnown RBP19.25■□□□□ 0.67
CIRBP-227ENST00000590188 SDCBP2Q9H190 292 aa19.25■□□□□ 0.67
CIRBP-227ENST00000590188 ABCB6Q9NP58 842 aa19.25■□□□□ 0.67
CIRBP-227ENST00000590188 HEBP1Q9NRV9 189 aa19.25■□□□□ 0.67
CIRBP-227ENST00000590188 FAM86C1Q9NVL1 165 aa19.25■□□□□ 0.67
CIRBP-227ENST00000590188 TRIM49BA6NDI0 452 aa19.24■□□□□ 0.67
CIRBP-227ENST00000590188 H0Y858 1186 aa19.24■□□□□ 0.67
CIRBP-227ENST00000590188 DPYSL4O14531 572 aa19.24■□□□□ 0.67
CIRBP-227ENST00000590188 GALR2O43603 387 aaPredicted RBP19.24■□□□□ 0.67
CIRBP-227ENST00000590188 LRRN2O75325 713 aa19.24■□□□□ 0.67
CIRBP-227ENST00000590188 HLA-DRAP01903 254 aa19.24■□□□□ 0.67
CIRBP-227ENST00000590188 CSH1P0DML2 217 aa19.24■□□□□ 0.67
CIRBP-227ENST00000590188 CSH2P0DML3 217 aa19.24■□□□□ 0.67
CIRBP-227ENST00000590188 PSMC3P17980 439 aa19.24■□□□□ 0.67
CIRBP-227ENST00000590188 PSMC2P35998 433 aaKnown RBP19.24■□□□□ 0.67
CIRBP-227ENST00000590188 GRIK1P39086 918 aa19.24■□□□□ 0.67
CIRBP-227ENST00000590188 PTPN5P54829 565 aa19.24■□□□□ 0.67
CIRBP-227ENST00000590188 PPP3CAQ08209 521 aa19.24■□□□□ 0.67
CIRBP-227ENST00000590188 ORC1Q13415 861 aa19.24■□□□□ 0.67
CIRBP-227ENST00000590188 CFAP221Q4G0U5 840 aa19.24■□□□□ 0.67
CIRBP-227ENST00000590188 TPRG1Q6ZUI0 275 aa19.24■□□□□ 0.67
CIRBP-227ENST00000590188 INTS8Q75QN2 995 aaKnown RBP19.24■□□□□ 0.67
CIRBP-227ENST00000590188 YAF2Q8IY57 180 aa19.24■□□□□ 0.67
CIRBP-227ENST00000590188 FUBP3Q96I24 572 aaKnown RBP eCLIP19.24■□□□□ 0.67
CIRBP-227ENST00000590188 GSDMAQ96QA5 445 aa19.24■□□□□ 0.67
CIRBP-227ENST00000590188 TASP1Q9H6P5 420 aa19.24■□□□□ 0.67
CIRBP-227ENST00000590188 HOOK1Q9UJC3 728 aaKnown RBP19.24■□□□□ 0.67
CIRBP-227ENST00000590188 CLDN5O00501 218 aa19.23■□□□□ 0.67
CIRBP-227ENST00000590188 PRAMEF12O95522 483 aa19.23■□□□□ 0.67
CIRBP-227ENST00000590188 F11P03951 625 aa19.23■□□□□ 0.67
CIRBP-227ENST00000590188 PTPN1P18031 435 aaKnown RBP19.23■□□□□ 0.67
CIRBP-227ENST00000590188 PMS1P54277 932 aaKnown RBP19.23■□□□□ 0.67
CIRBP-227ENST00000590188 NLRP12P59046 1061 aa19.23■□□□□ 0.67
CIRBP-227ENST00000590188 UBXN2BQ14CS0 331 aa19.23■□□□□ 0.67
CIRBP-227ENST00000590188 TXNDC8Q6A555 127 aa19.23■□□□□ 0.67
CIRBP-227ENST00000590188 TMEM150AQ86TG1 271 aa19.23■□□□□ 0.67
CIRBP-227ENST00000590188 MAB21L3Q8N8X9 362 aa19.23■□□□□ 0.67
CIRBP-227ENST00000590188 MYCBPAPQ8TBZ2 947 aa19.23■□□□□ 0.67
CIRBP-227ENST00000590188 PHOX2BQ99453 314 aa19.23■□□□□ 0.67
CIRBP-227ENST00000590188 PRRX2Q99811 253 aa19.23■□□□□ 0.67
CIRBP-227ENST00000590188 TSG101Q99816 390 aa19.23■□□□□ 0.67
CIRBP-227ENST00000590188 SLC46A2Q9BY10 475 aa19.23■□□□□ 0.67
CIRBP-227ENST00000590188 VRTNQ9H8Y1 702 aa19.23■□□□□ 0.67
CIRBP-227ENST00000590188 TRPV4Q9HBA0 871 aa19.23■□□□□ 0.67
CIRBP-227ENST00000590188 MAN1B1Q9UKM7 699 aa19.23■□□□□ 0.67
CIRBP-227ENST00000590188 ZNF263O14978 683 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 CETN3O15182 167 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 MAPK13O15264 365 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 NOL4O94818 638 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 STARD6P59095 220 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 MAPRE1Q15691 268 aaKnown RBP19.22■□□□□ 0.67
CIRBP-227ENST00000590188 SGSM1Q2NKQ1 1148 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 EDRF1Q3B7T1 1238 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 ANKRD40Q6AI12 368 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 PHLDB3Q6NSJ2 640 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 MFSD6LQ8IWD5 586 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 B3GALNT2Q8NCR0 500 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 TTC16Q8NEE8 873 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 TTC8Q8TAM2 541 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 SPATA20Q8TB22 786 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 TAS1R2Q8TE23 839 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 DEPDC1BQ8WUY9 529 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 SHDQ96IW2 340 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 ZFYVE19Q96K21 471 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 LRRC3BQ96PB8 259 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 ZNF518BQ9C0D4 1074 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 TRPC7Q9HCX4 862 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 CHMP5Q9NZZ3 219 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 SIT1Q9Y3P8 196 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 MTF2Q9Y483 593 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-227ENST00000590188 WDFY4Q6ZS81 3184 aa19.22■□□□□ 0.67
CIRBP-227ENST00000590188 KANSL1LA0AUZ9 987 aa19.21■□□□□ 0.67
CIRBP-227ENST00000590188 BIN1O00499 593 aa19.21■□□□□ 0.67
CIRBP-227ENST00000590188 IKBKBO14920 756 aa19.21■□□□□ 0.67
CIRBP-227ENST00000590188 TADA3O75528 432 aa19.21■□□□□ 0.67
CIRBP-227ENST00000590188 EPB41P11171 864 aaKnown RBP19.21■□□□□ 0.67
CIRBP-227ENST00000590188 ANXA13P27216 316 aa19.21■□□□□ 0.67
CIRBP-227ENST00000590188 ANP32AP39687 249 aaKnown RBP19.21■□□□□ 0.67
CIRBP-227ENST00000590188 MAGEA11P43364 429 aa19.21■□□□□ 0.67
CIRBP-227ENST00000590188 CACNA2D1P54289 1103 aa19.21■□□□□ 0.67
CIRBP-227ENST00000590188 PRKCQQ04759 706 aa19.21■□□□□ 0.67
CIRBP-227ENST00000590188 IFRD2Q12894 506 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-227ENST00000590188 CCDC105Q8IYK2 499 aa19.21■□□□□ 0.67
CIRBP-227ENST00000590188 DTWD2Q8NBA8 298 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms