RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 STX6O43752 255 aa17.47■□□□□ 0.39
MBD3-206ENST00000589901 NOL4O94818 638 aa17.47■□□□□ 0.39
MBD3-206ENST00000589901 RETP07949 1114 aa17.47■□□□□ 0.39
MBD3-206ENST00000589901 RPL10AP62906 217 aaKnown RBP17.47■□□□□ 0.39
MBD3-206ENST00000589901 FSTL4Q6MZW2 842 aa17.47■□□□□ 0.39
MBD3-206ENST00000589901 CBWD2Q8IUF1 395 aa17.47■□□□□ 0.39
MBD3-206ENST00000589901 TOP6BLQ8N6T0 577 aa17.47■□□□□ 0.39
MBD3-206ENST00000589901 LINC00301Q8NCQ3 95 aa17.47■□□□□ 0.39
MBD3-206ENST00000589901 MYRFLQ96LU7 910 aa17.47■□□□□ 0.39
MBD3-206ENST00000589901 SLC22A12Q96S37 553 aa17.47■□□□□ 0.39
MBD3-206ENST00000589901 BACH2Q9BYV9 841 aa17.47■□□□□ 0.39
MBD3-206ENST00000589901 ZSCAN16Q9H4T2 348 aaPredicted RBP17.47■□□□□ 0.39
MBD3-206ENST00000589901 KIF9Q9HAQ2 790 aa17.47■□□□□ 0.39
MBD3-206ENST00000589901 TRPC7Q9HCX4 862 aa17.47■□□□□ 0.39
MBD3-206ENST00000589901 INTS13Q9NVM9 706 aa17.47■□□□□ 0.39
MBD3-206ENST00000589901 CDV3Q9UKY7 258 aaKnown RBP17.47■□□□□ 0.39
MBD3-206ENST00000589901 GTF3C3Q9Y5Q9 886 aa17.47■□□□□ 0.39
MBD3-206ENST00000589901 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.47■□□□□ 0.39
MBD3-206ENST00000589901 ATP2C2O75185 946 aa17.46■□□□□ 0.39
MBD3-206ENST00000589901 SDHBP21912 280 aa17.46■□□□□ 0.39
MBD3-206ENST00000589901 CNR2P34972 360 aa17.46■□□□□ 0.39
MBD3-206ENST00000589901 HOXD13P35453 343 aa17.46■□□□□ 0.39
MBD3-206ENST00000589901 LHX1P48742 406 aa17.46■□□□□ 0.39
MBD3-206ENST00000589901 STK38Q15208 465 aa17.46■□□□□ 0.39
MBD3-206ENST00000589901 E2F4Q16254 413 aa17.46■□□□□ 0.39
MBD3-206ENST00000589901 CFAP221Q4G0U5 840 aa17.46■□□□□ 0.39
MBD3-206ENST00000589901 TMEM196Q5HYL7 178 aa17.46■□□□□ 0.39
MBD3-206ENST00000589901 NAIF1Q69YI7 327 aaPredicted RBP17.46■□□□□ 0.39
MBD3-206ENST00000589901 CC2D1AQ6P1N0 951 aaPredicted RBP17.46■□□□□ 0.39
MBD3-206ENST00000589901 SPATA2LQ8IUW3 424 aaPredicted RBP17.46■□□□□ 0.39
MBD3-206ENST00000589901 SCN4BQ8IWT1 228 aa17.46■□□□□ 0.39
MBD3-206ENST00000589901 TTC16Q8NEE8 873 aa17.46■□□□□ 0.39
MBD3-206ENST00000589901 KBTBD7Q8WVZ9 684 aa17.46■□□□□ 0.39
MBD3-206ENST00000589901 TRMT2BQ96GJ1 504 aaKnown RBP17.46■□□□□ 0.39
MBD3-206ENST00000589901 HPDLQ96IR7 371 aa17.46■□□□□ 0.39
MBD3-206ENST00000589901 ANKRD36BP1Q96IX9 119 aa17.46■□□□□ 0.39
MBD3-206ENST00000589901 CYP2S1Q96SQ9 504 aa17.46■□□□□ 0.39
MBD3-206ENST00000589901 TRIM9Q9C026 710 aa17.46■□□□□ 0.39
MBD3-206ENST00000589901 TNMDQ9H2S6 317 aa17.46■□□□□ 0.39
MBD3-206ENST00000589901 TFIP11Q9UBB9 837 aaKnown RBP17.46■□□□□ 0.39
MBD3-206ENST00000589901 UXTQ9UBK9 157 aaPredicted RBP17.46■□□□□ 0.39
MBD3-206ENST00000589901 TCHHQ07283 1943 aa17.45■□□□□ 0.38
MBD3-206ENST00000589901 ZNF233A6NK53 670 aa17.45■□□□□ 0.38
MBD3-206ENST00000589901 SOBPA7XYQ1 873 aa17.45■□□□□ 0.38
MBD3-206ENST00000589901 TRDMT1O14717 391 aaKnown RBP17.45■□□□□ 0.38
MBD3-206ENST00000589901 SPTLC2O15270 562 aa17.45■□□□□ 0.38
MBD3-206ENST00000589901 LMO2P25791 158 aa17.45■□□□□ 0.38
MBD3-206ENST00000589901 PCSK1P29120 753 aa17.45■□□□□ 0.38
MBD3-206ENST00000589901 HOXA6P31267 233 aa17.45■□□□□ 0.38
MBD3-206ENST00000589901 PXNP49023 591 aaPredicted RBP17.45■□□□□ 0.38
MBD3-206ENST00000589901 PSMC1P62191 440 aaKnown RBP17.45■□□□□ 0.38
MBD3-206ENST00000589901 GRSF1Q12849 480 aaKnown RBP eCLIP17.45■□□□□ 0.38
MBD3-206ENST00000589901 MYO1EQ12965 1108 aa17.45■□□□□ 0.38
MBD3-206ENST00000589901 ZNF268Q14587 947 aaPredicted RBP17.45■□□□□ 0.38
MBD3-206ENST00000589901 FAM171BQ6P995 826 aa17.45■□□□□ 0.38
MBD3-206ENST00000589901 LIMS2Q7Z4I7 341 aa17.45■□□□□ 0.38
MBD3-206ENST00000589901 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.45■□□□□ 0.38
MBD3-206ENST00000589901 WDR5BQ86VZ2 330 aa17.45■□□□□ 0.38
MBD3-206ENST00000589901 SPATA18Q8TC71 538 aa17.45■□□□□ 0.38
MBD3-206ENST00000589901 FBRSL1Q9HCM7 1045 aaKnown RBP17.45■□□□□ 0.38
MBD3-206ENST00000589901 SEMA4GQ9NTN9 838 aa17.45■□□□□ 0.38
MBD3-206ENST00000589901 KBTBD4Q9NVX7 518 aa17.45■□□□□ 0.38
MBD3-206ENST00000589901 POLR3BQ9NW08 1133 aaPredicted RBP17.45■□□□□ 0.38
MBD3-206ENST00000589901 HSPBP1Q9NZL4 362 aa17.45■□□□□ 0.38
MBD3-206ENST00000589901 R3HCC1Q9Y3T6 440 aaKnown RBP17.45■□□□□ 0.38
MBD3-206ENST00000589901 DCDC2BA2VCK2 349 aa17.44■□□□□ 0.38
MBD3-206ENST00000589901 K7ELQ4 463 aaPredicted RBP17.44■□□□□ 0.38
MBD3-206ENST00000589901 KIAA0391O15091 583 aaKnown RBP17.44■□□□□ 0.38
MBD3-206ENST00000589901 EGFP01133 1207 aa17.44■□□□□ 0.38
MBD3-206ENST00000589901 TNNC2P02585 160 aa17.44■□□□□ 0.38
MBD3-206ENST00000589901 GALK1P51570 392 aa17.44■□□□□ 0.38
MBD3-206ENST00000589901 FAM160A1Q05DH4 1040 aa17.44■□□□□ 0.38
MBD3-206ENST00000589901 MTF1Q14872 753 aa17.44■□□□□ 0.38
MBD3-206ENST00000589901 DUOXA2Q1HG44 320 aa17.44■□□□□ 0.38
MBD3-206ENST00000589901 STXBP4Q6ZWJ1 553 aa17.44■□□□□ 0.38
MBD3-206ENST00000589901 CEP68Q76N32 757 aa17.44■□□□□ 0.38
MBD3-206ENST00000589901 DPH6Q7L8W6 267 aa17.44■□□□□ 0.38
MBD3-206ENST00000589901 MYLPFQ96A32 169 aa17.44■□□□□ 0.38
MBD3-206ENST00000589901 DHX58Q96C10 678 aa17.44■□□□□ 0.38
MBD3-206ENST00000589901 FUBP3Q96I24 572 aaKnown RBP eCLIP17.44■□□□□ 0.38
MBD3-206ENST00000589901 SYT15Q9BQS2 421 aa17.44■□□□□ 0.38
MBD3-206ENST00000589901 CRTAC1Q9NQ79 661 aa17.44■□□□□ 0.38
MBD3-206ENST00000589901 SPTBN2O15020 2390 aa17.43■□□□□ 0.38
MBD3-206ENST00000589901 C2orf78A6NCI8 922 aa17.43■□□□□ 0.38
MBD3-206ENST00000589901 LRP3O75074 770 aa17.43■□□□□ 0.38
MBD3-206ENST00000589901 CKMP06732 381 aa17.43■□□□□ 0.38
MBD3-206ENST00000589901 PDGFRBP09619 1106 aa17.43■□□□□ 0.38
MBD3-206ENST00000589901 MAGEA11P43364 429 aa17.43■□□□□ 0.38
MBD3-206ENST00000589901 ASIC1P78348 528 aa17.43■□□□□ 0.38
MBD3-206ENST00000589901 PDGFRLQ15198 375 aa17.43■□□□□ 0.38
MBD3-206ENST00000589901 SURF1Q15526 300 aa17.43■□□□□ 0.38
MBD3-206ENST00000589901 ZNF77Q15935 545 aa17.43■□□□□ 0.38
MBD3-206ENST00000589901 EPM2AIP1Q7L775 607 aaPredicted RBP17.43■□□□□ 0.38
MBD3-206ENST00000589901 WDR49Q8IV35 697 aa17.43■□□□□ 0.38
MBD3-206ENST00000589901 FAM160A2Q8N612 972 aaPredicted RBP17.43■□□□□ 0.38
MBD3-206ENST00000589901 ARL14EPQ8N8R7 260 aaPredicted RBP17.43■□□□□ 0.38
MBD3-206ENST00000589901 RDH13Q8NBN7 331 aa17.43■□□□□ 0.38
MBD3-206ENST00000589901 RTKNQ9BST9 563 aa17.43■□□□□ 0.38
MBD3-206ENST00000589901 LRRC27Q9C0I9 530 aa17.43■□□□□ 0.38
MBD3-206ENST00000589901 CDH9Q9ULB4 789 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms