RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 GPR158Q5T848 1215 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 DCLK2Q8N568 766 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 ST13P5Q8NFI4 369 aaPredicted RBP11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 PJA1Q8NG27 643 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 CXorf38Q8TB03 319 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 TMEM174Q8WUU8 243 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 IRF7Q92985 503 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 MSANTD3Q96H12 275 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 SYT15Q9BQS2 421 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 PI4K2AQ9BTU6 479 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 SNX25Q9H3E2 840 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 TRPV4Q9HBA0 871 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 GDPD2Q9HCC8 539 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 MRPS17Q9Y2R5 130 aaKnown RBP11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 KANSL1LA0AUZ9 987 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 ZNF263O14978 683 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 TRIM66O15016 1216 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 NCAM2O15394 837 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 MOSPD3O75425 235 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 FAM163BP0C2L3 166 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 PRR29P0C7W0 189 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 GJA1P17302 382 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 NR2F2P24468 414 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 STARD6P59095 220 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 GRM2Q14416 872 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 UBXN2BQ14CS0 331 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 SOWAHAQ2M3V2 549 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 ZNF699Q32M78 642 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 CFAP221Q4G0U5 840 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 SLC44A4Q53GD3 710 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 CEP135Q66GS9 1140 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 TANGO2Q6ICL3 276 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 C1orf228Q6PIY5 440 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 TPRG1Q6ZUI0 275 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 OSTM1Q86WC4 334 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 CSGALNACT1Q8TDX6 532 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 GIPC2Q8TF65 315 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 MRPS31Q92665 395 aaKnown RBP11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 CHAMP1Q96JM3 812 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 FAM84AQ96KN4 292 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 HINFPQ9BQA5 517 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 RPP25Q9BUL9 199 aaKnown RBP11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 LRRC3Q9BY71 257 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 BCO2Q9BYV7 579 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 GTPBP4Q9BZE4 634 aaKnown RBP11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 IMPG2Q9BZV3 1241 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 KCTD10Q9H3F6 313 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 GOLPH3LQ9H4A5 285 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 ZNF334Q9HCZ1 680 aaPredicted RBP11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 OBP2AQ9NY56 170 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 EHD2Q9NZN4 543 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 DLGAP2Q9P1A6 1054 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 MAGEC2Q9UBF1 373 aaPredicted RBP11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 SIT1Q9Y3P8 196 aa11.33□□□□□ -0.6
CLPTM1-211ENST00000589347 F5P12259 2224 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 CACNA1IQ9P0X4 2223 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 LRRIQ3A6PVS8 624 aaPredicted RBP11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 HEPACAM2A8MVW5 462 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 MAN2B1O00754 1011 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 GABRDO14764 452 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 MAPK13O15264 365 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 TACC1O75410 805 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 SMC2O95347 1197 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 SP9P0CG40 484 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 KRT13P13646 458 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 SDHBP21912 280 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 GDI1P31150 447 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 AVPR1AP37288 418 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 PIK3CAP42336 1068 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 MAGEA11P43364 429 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 ATXN1P54253 815 aaKnown RBP11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 PSMC1P62191 440 aaKnown RBP11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 CYP4F8P98187 520 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 PLCB2Q00722 1185 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 CYP27A1Q02318 531 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 NCOA4Q13772 614 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 NFIL3Q16649 462 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 WDR72Q3MJ13 1102 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 ZNF667Q5HYK9 610 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 VSTM1Q6UX27 236 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 VITQ6UXI7 678 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 ZNF852Q6ZMS4 543 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 INTS8Q75QN2 995 aaKnown RBP11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 GAREM2Q75VX8 874 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 LRRTM3Q86VH5 581 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 MFSD6LQ8IWD5 586 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 SCN4BQ8IWT1 228 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 GUF1Q8N442 669 aaKnown RBP11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 CCDC150Q8NCX0 1101 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 OR6B3Q8NGW1 331 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 PARD3BQ8TEW8 1205 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 KBTBD7Q8WVZ9 684 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 MYLPFQ96A32 169 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 TRMT2BQ96GJ1 504 aaKnown RBP11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 CEP295NLQ96MC4 621 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 TSG101Q99816 390 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 OSBPL6Q9BZF3 934 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 DNAI2Q9GZS0 605 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 TASP1Q9H6P5 420 aa11.32□□□□□ -0.6
CLPTM1-211ENST00000589347 KIF9Q9HAQ2 790 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms