RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 ATMINO43313 823 aaPredicted RBP23.57■■□□□ 1.36
ATG4D-209ENST00000588857 ATP2C2O75185 946 aa23.57■■□□□ 1.36
ATG4D-209ENST00000588857 CCDC130P13994 396 aa23.57■■□□□ 1.36
ATG4D-209ENST00000588857 BCAR1P56945 870 aa23.57■■□□□ 1.36
ATG4D-209ENST00000588857 YWHAHQ04917 246 aaPredicted RBP23.57■■□□□ 1.36
ATG4D-209ENST00000588857 TMEM240Q5SV17 173 aa23.57■■□□□ 1.36
ATG4D-209ENST00000588857 PSRC1Q6PGN9 363 aaPredicted RBP23.57■■□□□ 1.36
ATG4D-209ENST00000588857 TMCO2Q7Z6W1 182 aaPredicted RBP23.57■■□□□ 1.36
ATG4D-209ENST00000588857 ZNF689Q96CS4 500 aaPredicted RBP23.57■■□□□ 1.36
ATG4D-209ENST00000588857 ACBD6Q9BR61 282 aa23.57■■□□□ 1.36
ATG4D-209ENST00000588857 AVENQ9NQS1 362 aaPredicted RBP23.57■■□□□ 1.36
ATG4D-209ENST00000588857 SF3B1O75533 1304 aaKnown RBP eCLIP23.56■■□□□ 1.363e-6■■■■■ 119.6
ATG4D-209ENST00000588857 ADORA2BP29275 332 aa23.56■■□□□ 1.36
ATG4D-209ENST00000588857 GPD2P43304 727 aa23.56■■□□□ 1.36
ATG4D-209ENST00000588857 ELAVL2Q12926 359 aaKnown RBP23.56■■□□□ 1.36
ATG4D-209ENST00000588857 TCEAL1Q15170 157 aa23.56■■□□□ 1.36
ATG4D-209ENST00000588857 SPOUT1Q5T280 376 aaKnown RBP23.56■■□□□ 1.36
ATG4D-209ENST00000588857 SLC2A14Q8TDB8 520 aa23.56■■□□□ 1.36
ATG4D-209ENST00000588857 RNPC3Q96LT9 517 aaKnown RBP23.56■■□□□ 1.36
ATG4D-209ENST00000588857 SYNCQ9H7C4 482 aa23.56■■□□□ 1.36
ATG4D-209ENST00000588857 OSGEPQ9NPF4 335 aa23.56■■□□□ 1.36
ATG4D-209ENST00000588857 MARCH5Q9NX47 278 aa23.56■■□□□ 1.36
ATG4D-209ENST00000588857 UVRAGQ9P2Y5 699 aa23.56■■□□□ 1.36
ATG4D-209ENST00000588857 COL4A6Q14031 1691 aa23.55■■□□□ 1.36
ATG4D-209ENST00000588857 CTAGE9A4FU28 777 aa23.55■■□□□ 1.36
ATG4D-209ENST00000588857 SYN3O14994 580 aa23.55■■□□□ 1.36
ATG4D-209ENST00000588857 RRM1P23921 792 aa23.55■■□□□ 1.36
ATG4D-209ENST00000588857 BTG3Q14201 252 aaPredicted RBP23.55■■□□□ 1.36
ATG4D-209ENST00000588857 C2CD6Q53TS8 623 aa23.55■■□□□ 1.36
ATG4D-209ENST00000588857 MDH1BQ5I0G3 518 aa23.55■■□□□ 1.36
ATG4D-209ENST00000588857 GPR153Q6NV75 609 aa23.55■■□□□ 1.36
ATG4D-209ENST00000588857 CMTR2Q8IYT2 770 aaKnown RBP23.55■■□□□ 1.36
ATG4D-209ENST00000588857 ANKRD52Q8NB46 1076 aa23.55■■□□□ 1.36
ATG4D-209ENST00000588857 HNRNPABQ99729 332 aaKnown RBP23.55■■□□□ 1.36
ATG4D-209ENST00000588857 NUP85Q9BW27 656 aa23.55■■□□□ 1.36
ATG4D-209ENST00000588857 CWH43Q9H720 699 aa23.55■■□□□ 1.36
ATG4D-209ENST00000588857 STRIP2Q9ULQ0 834 aa23.55■■□□□ 1.36
ATG4D-209ENST00000588857 PCDHGC5Q9Y5F6 944 aa23.55■■□□□ 1.36
ATG4D-209ENST00000588857 VWA8A3KMH1 1905 aa23.55■■□□□ 1.36
ATG4D-209ENST00000588857 NT5C1B-RDH14C9J2C7 533 aa23.54■■□□□ 1.36
ATG4D-209ENST00000588857 PALMO75781 387 aa23.54■■□□□ 1.36
ATG4D-209ENST00000588857 SETSIPP0DME0 302 aa23.54■■□□□ 1.36
ATG4D-209ENST00000588857 TKTP29401 623 aaKnown RBP23.54■■□□□ 1.36
ATG4D-209ENST00000588857 PBX3P40426 434 aa23.54■■□□□ 1.36
ATG4D-209ENST00000588857 PTP4A2Q12974 167 aa23.54■■□□□ 1.36
ATG4D-209ENST00000588857 FAM171A1Q5VUB5 890 aa23.54■■□□□ 1.36
ATG4D-209ENST00000588857 KIAA0319Q5VV43 1072 aa23.54■■□□□ 1.36
ATG4D-209ENST00000588857 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.54■■□□□ 1.36
ATG4D-209ENST00000588857 TTC30AQ86WT1 665 aa23.54■■□□□ 1.36
ATG4D-209ENST00000588857 TPCN2Q8NHX9 752 aa23.54■■□□□ 1.36
ATG4D-209ENST00000588857 YME1L1Q96TA2 773 aa23.54■■□□□ 1.36
ATG4D-209ENST00000588857 NAPGQ99747 312 aaPredicted RBP23.54■■□□□ 1.36
ATG4D-209ENST00000588857 RTP3Q9BQQ7 232 aa23.54■■□□□ 1.36
ATG4D-209ENST00000588857 MED10Q9BTT4 135 aa23.54■■□□□ 1.36
ATG4D-209ENST00000588857 MRPL47Q9HD33 250 aaKnown RBP23.54■■□□□ 1.36
ATG4D-209ENST00000588857 CRTAC1Q9NQ79 661 aa23.54■■□□□ 1.36
ATG4D-209ENST00000588857 CHORDC1Q9UHD1 332 aaPredicted RBP23.54■■□□□ 1.36
ATG4D-209ENST00000588857 CYTH4Q9UIA0 394 aa23.54■■□□□ 1.36
ATG4D-209ENST00000588857 OAZ2O95190 189 aa23.53■■□□□ 1.36
ATG4D-209ENST00000588857 BCAT1P54687 386 aa23.53■■□□□ 1.36
ATG4D-209ENST00000588857 HADHBP55084 474 aaKnown RBP23.53■■□□□ 1.36
ATG4D-209ENST00000588857 SLC8A3P57103 927 aa23.53■■□□□ 1.36
ATG4D-209ENST00000588857 TSPY1Q01534 308 aa23.53■■□□□ 1.36
ATG4D-209ENST00000588857 BST2Q10589 180 aaKnown RBP23.53■■□□□ 1.36
ATG4D-209ENST00000588857 PDCLQ13371 301 aa23.53■■□□□ 1.36
ATG4D-209ENST00000588857 PKDCCQ504Y2 493 aa23.53■■□□□ 1.36
ATG4D-209ENST00000588857 FUT10Q6P4F1 479 aa23.53■■□□□ 1.36
ATG4D-209ENST00000588857 PHLDB2Q86SQ0 1253 aa23.53■■□□□ 1.36
ATG4D-209ENST00000588857 MYCBPAPQ8TBZ2 947 aa23.53■■□□□ 1.36
ATG4D-209ENST00000588857 C18orf8Q96DM3 657 aa23.53■■□□□ 1.36
ATG4D-209ENST00000588857 MIS12Q9H081 205 aa23.53■■□□□ 1.36
ATG4D-209ENST00000588857 RC3H2Q9HBD1 1191 aaKnown RBP23.53■■□□□ 1.36
ATG4D-209ENST00000588857 ST7Q9NRC1 585 aa23.53■■□□□ 1.36
ATG4D-209ENST00000588857 COG5Q9UP83 839 aa23.53■■□□□ 1.36
ATG4D-209ENST00000588857 SCINQ9Y6U3 715 aa23.53■■□□□ 1.36
ATG4D-209ENST00000588857 GRID2IPA4D2P6 1211 aa23.52■■□□□ 1.36
ATG4D-209ENST00000588857 MTA2O94776 668 aa23.52■■□□□ 1.36
ATG4D-209ENST00000588857 SNX16P57768 344 aa23.52■■□□□ 1.36
ATG4D-209ENST00000588857 PTPN20Q4JDL3 420 aa23.52■■□□□ 1.36
ATG4D-209ENST00000588857 INTS6LQ5JSJ4 861 aaKnown RBP23.52■■□□□ 1.36
ATG4D-209ENST00000588857 CEP57Q86XR8 500 aa23.52■■□□□ 1.36
ATG4D-209ENST00000588857 SYCE1Q8N0S2 351 aa23.52■■□□□ 1.36
ATG4D-209ENST00000588857 FUKQ8N0W3 1084 aa23.52■■□□□ 1.36
ATG4D-209ENST00000588857 ZNF564Q8TBZ8 553 aaPredicted RBP23.52■■□□□ 1.36
ATG4D-209ENST00000588857 IPO4Q8TEX9 1081 aaKnown RBP23.52■■□□□ 1.36
ATG4D-209ENST00000588857 CPXM1Q96SM3 734 aa23.52■■□□□ 1.36
ATG4D-209ENST00000588857 GPR62Q9BZJ7 368 aa23.52■■□□□ 1.36
ATG4D-209ENST00000588857 PARVAQ9NVD7 372 aa23.52■■□□□ 1.36
ATG4D-209ENST00000588857 JRKLQ9Y4A0 524 aa23.52■■□□□ 1.36
ATG4D-209ENST00000588857 MYBPHLA2RUH7 354 aa23.52■■□□□ 1.36
ATG4D-209ENST00000588857 CARNS1A5YM72 827 aa23.52■■□□□ 1.36
ATG4D-209ENST00000588857 FANCGO15287 622 aa23.52■■□□□ 1.36
ATG4D-209ENST00000588857 PLCB3Q01970 1234 aa23.52■■□□□ 1.36
ATG4D-209ENST00000588857 PDE4CQ08493 712 aa23.52■■□□□ 1.36
ATG4D-209ENST00000588857 MAPRE1Q15691 268 aaKnown RBP23.52■■□□□ 1.36
ATG4D-209ENST00000588857 RASIP1Q5U651 963 aa23.52■■□□□ 1.36
ATG4D-209ENST00000588857 DAAM2Q86T65 1068 aa23.52■■□□□ 1.36
ATG4D-209ENST00000588857 B3GNT5Q9BYG0 378 aa23.52■■□□□ 1.36
ATG4D-209ENST00000588857 FGFR3P22607 806 aa23.51■■□□□ 1.35
ATG4D-209ENST00000588857 VARS2Q5ST30 1063 aaKnown RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms