RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 NFE2Q16621 373 aaPredicted RBP11.18□□□□□ -0.62
NEDD4L-224ENST00000588712 PKDCCQ504Y2 493 aa11.18□□□□□ -0.62
NEDD4L-224ENST00000588712 INTS6LQ5JSJ4 861 aaKnown RBP11.18□□□□□ -0.62
NEDD4L-224ENST00000588712 FUT10Q6P4F1 479 aa11.18□□□□□ -0.62
NEDD4L-224ENST00000588712 FAM171BQ6P995 826 aa11.18□□□□□ -0.62
NEDD4L-224ENST00000588712 ANKS3Q6ZW76 656 aa11.18□□□□□ -0.62
NEDD4L-224ENST00000588712 WDTC1Q8N5D0 677 aa11.18□□□□□ -0.62
NEDD4L-224ENST00000588712 HASPINQ8TF76 798 aa11.18□□□□□ -0.62
NEDD4L-224ENST00000588712 HSFY1Q96LI6 401 aa11.18□□□□□ -0.62
NEDD4L-224ENST00000588712 ZNF558Q96NG5 402 aa11.18□□□□□ -0.62
NEDD4L-224ENST00000588712 ZBED2Q9BTP6 218 aa11.18□□□□□ -0.62
NEDD4L-224ENST00000588712 MED10Q9BTT4 135 aa11.18□□□□□ -0.62
NEDD4L-224ENST00000588712 DUSP16Q9BY84 665 aa11.18□□□□□ -0.62
NEDD4L-224ENST00000588712 DPEP3Q9H4B8 488 aa11.18□□□□□ -0.62
NEDD4L-224ENST00000588712 CWH43Q9H720 699 aa11.18□□□□□ -0.62
NEDD4L-224ENST00000588712 FAM49BQ9NUQ9 324 aa11.18□□□□□ -0.62
NEDD4L-224ENST00000588712 TFR2Q9UP52 801 aa11.18□□□□□ -0.62
NEDD4L-224ENST00000588712 A0A0U1RQJ8 604 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 BUB1O43683 1085 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 GJB5O95377 273 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 MOCS3O95396 460 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 ABL1P00519 1130 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 ITGB1P05556 798 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 CFHP08603 1231 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 PRLRP16471 622 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 FGFR3P22607 806 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 GATMP50440 423 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 DEFB103AP81534 67 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 PDCLQ13371 301 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 TMEM240Q5SV17 173 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 FAM171A1Q5VUB5 890 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 PLEKHA7Q6IQ23 1121 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 ZNF280DQ6N043 979 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 MMS22LQ6ZRQ5 1243 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 C16orf59Q7L2K0 433 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 SLC35F6Q8N357 371 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 TPCN2Q8NHX9 752 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 SLC2A14Q8TDB8 520 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 SLC35F5Q8WV83 523 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 ATRIPQ8WXE1 791 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 ABHD8Q96I13 439 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 C11orf70Q9BRQ4 267 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 NUP85Q9BW27 656 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 IRX2Q9BZI1 471 aaPredicted RBP11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 RC3H2Q9HBD1 1191 aaKnown RBP11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 PCDHB12Q9Y5F1 795 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 TIMM13Q9Y5L4 95 aaPredicted RBP11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 SLC4A7Q9Y6M7 1214 aa11.17□□□□□ -0.62
NEDD4L-224ENST00000588712 MYO1FO00160 1098 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 XPO1O14980 1071 aaKnown RBP11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 B4GALT3O60512 393 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 PALMO75781 387 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 FAM200BP0CF97 657 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 NPR3P17342 541 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 DESP17661 470 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 RRM1P23921 792 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 ACAT1P24752 427 aaKnown RBP11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 SLC1A1P43005 524 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 HTRA4P83105 476 aaPredicted RBP11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 PTP4A2Q12974 167 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 MRPL58Q14197 206 aaKnown RBP11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 USP41Q3LFD5 358 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 MDH1BQ5I0G3 518 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 C11orf63Q6NUN7 778 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 KCNT2Q6UVM3 1135 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 DAAM2Q86T65 1068 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 TMEM110Q86TL2 294 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 GPR65Q8IYL9 337 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 C3orf20Q8ND61 904 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 UBA3Q8TBC4 463 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 ZNF564Q8TBZ8 553 aaPredicted RBP11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 SMARCD1Q96GM5 515 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 TMEM169Q96HH4 297 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 IGSF21Q96ID5 467 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 WDR24Q96S15 920 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 TTPALQ9BTX7 342 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 SLC4A5Q9BY07 1137 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 MARCH5Q9NX47 278 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 NME7Q9Y5B8 376 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 I3L4J1 428 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 ADORA2BP29275 332 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 SCNN1AP37088 669 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 PLA2G4AP47712 749 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 RPL34P49207 117 aaKnown RBP11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 PSMC1P62191 440 aaKnown RBP11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 KRT17Q04695 432 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 MAMLD1Q13495 774 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 VARS2Q5ST30 1063 aaKnown RBP11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 DNAJC24Q6P3W2 148 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 SLFN11Q7Z7L1 901 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 CEP57Q86XR8 500 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 FUKQ8N0W3 1084 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 FIBCD1Q8N539 461 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 FEZF2Q8TBJ5 459 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 C2orf15Q8WU43 125 aaKnown RBP11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 KCTD13Q8WZ19 329 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 ARHGEF26Q96DR7 871 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 FUBP3Q96I24 572 aaKnown RBP eCLIP11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 RAD9AQ99638 391 aa11.16□□□□□ -0.62
NEDD4L-224ENST00000588712 SELENOOQ9BVL4 669 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms