RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 AADACL2Q6P093 401 aa20.96■□□□□ 0.95
TRIM47-204ENST00000587339 TMCO3Q6UWJ1 677 aa20.96■□□□□ 0.95
TRIM47-204ENST00000587339 LPIN3Q9BQK8 851 aa20.96■□□□□ 0.95
TRIM47-204ENST00000587339 PAAF1Q9BRP4 392 aa20.96■□□□□ 0.95
TRIM47-204ENST00000587339 SETSIPP0DME0 302 aa20.95■□□□□ 0.94
TRIM47-204ENST00000587339 RFC1P35251 1148 aaPredicted RBP20.95■□□□□ 0.94
TRIM47-204ENST00000587339 TUSC3Q13454 348 aa20.95■□□□□ 0.94
TRIM47-204ENST00000587339 PIGHQ14442 188 aaPredicted RBP20.95■□□□□ 0.94
TRIM47-204ENST00000587339 DSTYKQ6XUX3 929 aa20.95■□□□□ 0.94
TRIM47-204ENST00000587339 OSTM1Q86WC4 334 aa20.95■□□□□ 0.94
TRIM47-204ENST00000587339 RHOT1Q8IXI2 618 aa20.95■□□□□ 0.94
TRIM47-204ENST00000587339 KLHL7Q8IXQ5 586 aa20.95■□□□□ 0.94
TRIM47-204ENST00000587339 HDAC7Q8WUI4 952 aa20.95■□□□□ 0.94
TRIM47-204ENST00000587339 DDX27Q96GQ7 796 aaKnown RBP20.95■□□□□ 0.94
TRIM47-204ENST00000587339 E5RJQ4 531 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 GABRDO14764 452 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 PSTPIP1O43586 416 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 PQBP1O60828 265 aaKnown RBP20.94■□□□□ 0.94
TRIM47-204ENST00000587339 CCDC130P13994 396 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 SSR1P43307 286 aaKnown RBP20.94■□□□□ 0.94
TRIM47-204ENST00000587339 ZNF252P-AS1Q0IIN9 211 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 GLB1LQ6UWU2 654 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 B3GALNT2Q8NCR0 500 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 SLC35F5Q8WV83 523 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 LINC01599Q8WXQ3 324 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 MCRS1Q96EZ8 462 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 METTL5Q9NRN9 209 aaKnown RBP20.94■□□□□ 0.94
TRIM47-204ENST00000587339 GOLGA6L10A0A0M3HER8 536 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 PITPNM1O00562 1244 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 ERLIN1O75477 346 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 B3GAT3O94766 335 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 ADORA2BP29275 332 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 MRPS25P82663 173 aaKnown RBP20.94■□□□□ 0.94
TRIM47-204ENST00000587339 SLC7A5Q01650 507 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 OGDHQ02218 1023 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 PDE4CQ08493 712 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 PMF1Q6P1K2 205 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 TMEM86AQ8N2M4 240 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 ANKRD52Q8NB46 1076 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 ARFGAP3Q9NP61 516 aa20.94■□□□□ 0.94
TRIM47-204ENST00000587339 DMGDHQ9UI17 866 aaKnown RBP20.94■□□□□ 0.94
TRIM47-204ENST00000587339 F8VP50 259 aa20.93■□□□□ 0.94
TRIM47-204ENST00000587339 TULP2O00295 520 aa20.93■□□□□ 0.94
TRIM47-204ENST00000587339 INPPL1O15357 1258 aa20.93■□□□□ 0.94
TRIM47-204ENST00000587339 NBNO60934 754 aa20.93■□□□□ 0.94
TRIM47-204ENST00000587339 ZMYND10O75800 440 aa20.93■□□□□ 0.94
TRIM47-204ENST00000587339 HSPA6P17066 643 aa20.93■□□□□ 0.94
TRIM47-204ENST00000587339 LHX1P48742 406 aa20.93■□□□□ 0.94
TRIM47-204ENST00000587339 RGS7P49802 495 aa20.93■□□□□ 0.94
TRIM47-204ENST00000587339 BCAT1P54687 386 aa20.93■□□□□ 0.94
TRIM47-204ENST00000587339 FAM189BP81408 668 aa20.93■□□□□ 0.94
TRIM47-204ENST00000587339 BST2Q10589 180 aaKnown RBP20.93■□□□□ 0.94
TRIM47-204ENST00000587339 FAM102AQ5T9C2 384 aaPredicted RBP20.93■□□□□ 0.94
TRIM47-204ENST00000587339 ADAT2Q7Z6V5 191 aaKnown RBP20.93■□□□□ 0.94
TRIM47-204ENST00000587339 NIPA2Q8N8Q9 360 aa20.93■□□□□ 0.94
TRIM47-204ENST00000587339 JOSD2Q8TAC2 188 aa20.93■□□□□ 0.94
TRIM47-204ENST00000587339 SLC2A14Q8TDB8 520 aa20.93■□□□□ 0.94
TRIM47-204ENST00000587339 FNIP1Q8TF40 1166 aa20.93■□□□□ 0.94
TRIM47-204ENST00000587339 UROC1Q96N76 676 aa20.93■□□□□ 0.94
TRIM47-204ENST00000587339 DDX43Q9NXZ2 648 aaKnown RBP20.93■□□□□ 0.94
TRIM47-204ENST00000587339 STIM2Q9P246 746 aa20.93■□□□□ 0.94
TRIM47-204ENST00000587339 PIK3R2O00459 728 aa20.92■□□□□ 0.94
TRIM47-204ENST00000587339 AARSP49588 968 aaKnown RBP eCLIP20.92■□□□□ 0.94
TRIM47-204ENST00000587339 ATN1P54259 1190 aaPredicted RBP20.92■□□□□ 0.94
TRIM47-204ENST00000587339 SNX16P57768 344 aa20.92■□□□□ 0.94
TRIM47-204ENST00000587339 TAS2R40P59535 323 aa20.92■□□□□ 0.94
TRIM47-204ENST00000587339 CC2D1AQ6P1N0 951 aaPredicted RBP20.92■□□□□ 0.94
TRIM47-204ENST00000587339 STK32AQ8WU08 396 aa20.92■□□□□ 0.94
TRIM47-204ENST00000587339 HNRNPLLQ8WVV9 542 aaKnown RBP20.92■□□□□ 0.94
TRIM47-204ENST00000587339 RUBCNQ92622 972 aa20.92■□□□□ 0.94
TRIM47-204ENST00000587339 SLC4A5Q9BY07 1137 aa20.92■□□□□ 0.94
TRIM47-204ENST00000587339 DDX47Q9H0S4 455 aaKnown RBP20.92■□□□□ 0.94
TRIM47-204ENST00000587339 SART1O43290 800 aaKnown RBP20.92■□□□□ 0.94
TRIM47-204ENST00000587339 ACAT1P24752 427 aaKnown RBP20.92■□□□□ 0.94
TRIM47-204ENST00000587339 PSMA2P25787 234 aa20.92■□□□□ 0.94
TRIM47-204ENST00000587339 TIGD5Q53EQ6 642 aa20.92■□□□□ 0.94
TRIM47-204ENST00000587339 OR6B2Q6IFH4 312 aa20.92■□□□□ 0.94
TRIM47-204ENST00000587339 TMEM110Q86TL2 294 aa20.92■□□□□ 0.94
TRIM47-204ENST00000587339 EMC1Q8N766 993 aa20.92■□□□□ 0.94
TRIM47-204ENST00000587339 DBF4BQ8NFT6 615 aa20.92■□□□□ 0.94
TRIM47-204ENST00000587339 NR2E1Q9Y466 385 aa20.92■□□□□ 0.94
TRIM47-204ENST00000587339 TIMM13Q9Y5L4 95 aaPredicted RBP20.92■□□□□ 0.94
TRIM47-204ENST00000587339 ATP2C2O75185 946 aa20.91■□□□□ 0.94
TRIM47-204ENST00000587339 PTPN1P18031 435 aaKnown RBP20.91■□□□□ 0.94
TRIM47-204ENST00000587339 GPNMBQ14956 572 aa20.91■□□□□ 0.94
TRIM47-204ENST00000587339 PAN2Q504Q3 1202 aaKnown RBP20.91■□□□□ 0.94
TRIM47-204ENST00000587339 PLEKHG4Q58EX7 1191 aa20.91■□□□□ 0.94
TRIM47-204ENST00000587339 FAM183BPQ6ZVS7 135 aa20.91■□□□□ 0.94
TRIM47-204ENST00000587339 SLC13A5Q86YT5 568 aaPredicted RBP20.91■□□□□ 0.94
TRIM47-204ENST00000587339 HINFPQ9BQA5 517 aa20.91■□□□□ 0.94
TRIM47-204ENST00000587339 ZNF446Q9NWS9 450 aa20.91■□□□□ 0.94
TRIM47-204ENST00000587339 ODC1P11926 461 aa20.9■□□□□ 0.94
TRIM47-204ENST00000587339 PAX3P23760 479 aa20.9■□□□□ 0.94
TRIM47-204ENST00000587339 PPP2R5EQ16537 467 aa20.9■□□□□ 0.94
TRIM47-204ENST00000587339 KATNAL2Q8IYT4 538 aa20.9■□□□□ 0.94
TRIM47-204ENST00000587339 HNRNPABQ99729 332 aaKnown RBP20.9■□□□□ 0.94
TRIM47-204ENST00000587339 SLITRK6Q9H5Y7 841 aa20.9■□□□□ 0.94
TRIM47-204ENST00000587339 TDRD15B5MCY1 1934 aaKnown RBP20.9■□□□□ 0.94
TRIM47-204ENST00000587339 RAD51CO43502 376 aa20.9■□□□□ 0.94
TRIM47-204ENST00000587339 SEC31AO94979 1220 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms