RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 GPD1LQ8N335 351 aa16.31■□□□□ 0.2
PRKCSH-204ENST00000587290 LRRC52Q8N7C0 313 aa16.31■□□□□ 0.2
PRKCSH-204ENST00000587290 CACTINQ8WUQ7 758 aaKnown RBP16.31■□□□□ 0.2
PRKCSH-204ENST00000587290 MRPS31Q92665 395 aaKnown RBP16.31■□□□□ 0.2
PRKCSH-204ENST00000587290 CYP2S1Q96SQ9 504 aa16.31■□□□□ 0.2
PRKCSH-204ENST00000587290 FBRSL1Q9HCM7 1045 aaKnown RBP16.31■□□□□ 0.2
PRKCSH-204ENST00000587290 TDP1Q9NUW8 608 aa16.31■□□□□ 0.2
PRKCSH-204ENST00000587290 THG1LQ9NWX6 298 aaKnown RBP16.31■□□□□ 0.2
PRKCSH-204ENST00000587290 CDV3Q9UKY7 258 aaKnown RBP16.31■□□□□ 0.2
PRKCSH-204ENST00000587290 MYOFQ9NZM1 2061 aa16.31■□□□□ 0.2
PRKCSH-204ENST00000587290 STX6O43752 255 aa16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 LDHAP00338 332 aaKnown RBP16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 EGFP01133 1207 aa16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 CSH1P0DML2 217 aa16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 CSH2P0DML3 217 aa16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 LMO2P25791 158 aa16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 NASPP49321 788 aaPredicted RBP16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 MYL7Q01449 175 aa16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 ALCAMQ13740 583 aa16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 RUNX3Q13761 415 aa16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 E2F4Q16254 413 aa16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 FOXD4L6Q3SYB3 417 aaPredicted RBP16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 LAIR1Q6GTX8 287 aa16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 C1orf228Q6PIY5 440 aa16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 FOXD4L3Q6VB84 417 aaPredicted RBP16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 CCDC65Q8IXS2 484 aa16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 LEO1Q8WVC0 666 aaPredicted RBP16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 KBTBD7Q8WVZ9 684 aa16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 DHX58Q96C10 678 aa16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 ACBD6Q9BR61 282 aa16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 INTS13Q9NVM9 706 aa16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 GDAP2Q9NXN4 497 aa16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 TPRP12270 2363 aaKnown RBP16.3■□□□□ 0.2
PRKCSH-204ENST00000587290 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 C2orf78A6NCI8 922 aa16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 NOL4O94818 638 aa16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 RBP5P82980 135 aa16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 LMNB2Q03252 620 aa16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 CCDC6Q16204 474 aa16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 TMEM196Q5HYL7 178 aa16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 MON1AQ86VX9 555 aa16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 LONP2Q86WA8 852 aa16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 SPATA2LQ8IUW3 424 aaPredicted RBP16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 TMEM86AQ8N2M4 240 aa16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 RDH13Q8NBN7 331 aa16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 LINC00301Q8NCQ3 95 aa16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 MYLPFQ96A32 169 aa16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 HPDLQ96IR7 371 aa16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 ANKRD36BP1Q96IX9 119 aa16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 SYT15Q9BQS2 421 aa16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 TRIM9Q9C026 710 aa16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 TMEM206Q9H813 350 aa16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 HSPBP1Q9NZL4 362 aa16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 NME7Q9Y5B8 376 aa16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 WNT6Q9Y6F9 365 aa16.29■□□□□ 0.2
PRKCSH-204ENST00000587290 K7ELQ4 463 aaPredicted RBP16.28■□□□□ 0.2
PRKCSH-204ENST00000587290 GABRDO14764 452 aa16.28■□□□□ 0.2
PRKCSH-204ENST00000587290 GDF9O60383 454 aa16.28■□□□□ 0.2
PRKCSH-204ENST00000587290 RNF40O75150 1001 aa16.28■□□□□ 0.2
PRKCSH-204ENST00000587290 PAPSS2O95340 614 aaPredicted RBP16.28■□□□□ 0.2
PRKCSH-204ENST00000587290 CKMP06732 381 aa16.28■□□□□ 0.2
PRKCSH-204ENST00000587290 PDGFRBP09619 1106 aa16.28■□□□□ 0.2
PRKCSH-204ENST00000587290 RPL10AP62906 217 aaKnown RBP16.28■□□□□ 0.2
PRKCSH-204ENST00000587290 ASIC1P78348 528 aa16.28■□□□□ 0.2
PRKCSH-204ENST00000587290 MTF1Q14872 753 aa16.28■□□□□ 0.2
PRKCSH-204ENST00000587290 SHC4Q6S5L8 630 aa16.28■□□□□ 0.2
PRKCSH-204ENST00000587290 FAM160A2Q8N612 972 aaPredicted RBP16.28■□□□□ 0.2
PRKCSH-204ENST00000587290 TOP6BLQ8N6T0 577 aa16.28■□□□□ 0.2
PRKCSH-204ENST00000587290 GPR161Q8N6U8 529 aaKnown RBP16.28■□□□□ 0.2
PRKCSH-204ENST00000587290 ARL14EPQ8N8R7 260 aaPredicted RBP16.28■□□□□ 0.2
PRKCSH-204ENST00000587290 INTS4Q96HW7 963 aaKnown RBP16.28■□□□□ 0.2
PRKCSH-204ENST00000587290 TNMDQ9H2S6 317 aa16.28■□□□□ 0.2
PRKCSH-204ENST00000587290 ABCB6Q9NP58 842 aa16.28■□□□□ 0.2
PRKCSH-204ENST00000587290 CRTAC1Q9NQ79 661 aa16.28■□□□□ 0.2
PRKCSH-204ENST00000587290 MORC2Q9Y6X9 1032 aaPredicted RBP16.28■□□□□ 0.2
PRKCSH-204ENST00000587290 CNOT1A5YKK6 2376 aaKnown RBP16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 ANTXRLA6NF34 631 aa16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 ZNF233A6NK53 670 aa16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 CLIC2O15247 247 aa16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 SPTLC2O15270 562 aa16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 TNNC2P02585 160 aa16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 RETP07949 1114 aa16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 BDNFP23560 247 aa16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 DDX6P26196 483 aaKnown RBP eCLIP16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 PCSK1P29120 753 aa16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 CYP2J2P51589 502 aa16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 USP46P62068 366 aa16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 ZNF77Q15935 545 aa16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 CC2D1AQ6P1N0 951 aaPredicted RBP16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 CEP68Q76N32 757 aa16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 NELFCDQ8IXH7 590 aa16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 EZH1Q92800 747 aaPredicted RBP16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 ELMO3Q96BJ8 720 aa16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 TRMT2BQ96GJ1 504 aaKnown RBP16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 HHIPQ96QV1 700 aa16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 MRPL45Q9BRJ2 306 aaKnown RBP16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 BLZF1Q9H2G9 400 aa16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 ZSCAN16Q9H4T2 348 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms