RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 RNF8O76064 485 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 MTA2O94776 668 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 MICAL2O94851 1124 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 FTCDO95954 541 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 CXCL10P02778 98 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 ATP1A1P05023 1023 aaKnown RBP6.54□□□□□ -1.36
LIG3-206ENST00000586058 CYP1A2P05177 515 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 UQCRHP07919 91 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 FAM200BP0CF97 657 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 FGFR1P11362 822 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 PRLRP16471 622 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 CHRNB2P17787 502 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 TYMPP19971 482 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 MCM3P25205 808 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 ADORA2BP29275 332 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 CDH5P33151 784 aaPredicted RBP6.54□□□□□ -1.36
LIG3-206ENST00000586058 CYP2C18P33260 490 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 DNA2P51530 1060 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 YWHAHQ04917 246 aaPredicted RBP6.54□□□□□ -1.36
LIG3-206ENST00000586058 SOX4Q06945 474 aaPredicted RBP6.54□□□□□ -1.36
LIG3-206ENST00000586058 PDCLQ13371 301 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 PPIGQ13427 754 aaKnown RBP eCLIP6.54□□□□□ -1.363e-7■■□□□ 12.8
LIG3-206ENST00000586058 MESDQ14696 234 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 TCEAL1Q15170 157 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 UPP1Q16831 310 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 HADHQ16836 314 aaKnown RBP6.54□□□□□ -1.36
LIG3-206ENST00000586058 SOWAHAQ2M3V2 549 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 FAM102AQ5T9C2 384 aaPredicted RBP6.54□□□□□ -1.36
LIG3-206ENST00000586058 ARHGAP17Q68EM7 881 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 OVOS1Q6IE37 1185 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 ZNF280DQ6N043 979 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 LCLAT1Q6UWP7 414 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 MON1BQ7L1V2 547 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 ZNF598Q86UK7 904 aaKnown RBP6.54□□□□□ -1.36
LIG3-206ENST00000586058 DCP1BQ8IZD4 617 aaKnown RBP6.54□□□□□ -1.36
LIG3-206ENST00000586058 SIX6OS1Q8N1H7 587 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 PDCL2Q8N4E4 241 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 DNAJC5GQ8N7S2 189 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 C3orf20Q8ND61 904 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 MYRIPQ8NFW9 859 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 CXorf38Q8TB03 319 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 DIS3LQ8TF46 1054 aaKnown RBP6.54□□□□□ -1.36
LIG3-206ENST00000586058 MAIP1Q8WWC4 291 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 UBXN4Q92575 508 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 C18orf8Q96DM3 657 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 PBKQ96KB5 322 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 MRPL45Q9BRJ2 306 aaKnown RBP6.54□□□□□ -1.36
LIG3-206ENST00000586058 TMEM175Q9BSA9 504 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 HTATIP2Q9BUP3 242 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 OXCT2Q9BYC2 517 aaPredicted RBP6.54□□□□□ -1.36
LIG3-206ENST00000586058 ELOVL4Q9GZR5 314 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 SDCBP2Q9H190 292 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 WNT8AQ9H1J5 351 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 OSGEPQ9NPF4 335 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 ACP6Q9NPH0 428 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 CYLDQ9NQC7 956 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 PRDM10Q9NQV6 1147 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 TBC1D13Q9NVG8 400 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 ARGLU1Q9NWB6 273 aaPredicted RBP6.54□□□□□ -1.36
LIG3-206ENST00000586058 STK39Q9UEW8 545 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 TBX21Q9UL17 535 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 NENFQ9UMX5 172 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 SNX12Q9UMY4 172 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 L1RE1Q9UN81 338 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 STXBP5LQ9Y2K9 1186 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 DUSP10Q9Y6W6 482 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 OBSL1O75147 1896 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 HELZP42694 1942 aaKnown RBP6.53□□□□□ -1.36
LIG3-206ENST00000586058 MTCL1Q9Y4B5 1905 aaKnown RBP6.53□□□□□ -1.36
LIG3-206ENST00000586058 A0A0U1RQJ8 604 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 GRID2IPA4D2P6 1211 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 MEIS3P2A8K0S8 358 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 ZBBXA8MT70 800 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 EFCAB8A8MWE9 144 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 GOLGA8SH3BPF8 625 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 H7C4K7 107 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 PGRMC1O00264 195 aaKnown RBP6.53□□□□□ -1.36
LIG3-206ENST00000586058 O00370 1275 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 ENPP3O14638 875 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 KCNK3O14649 394 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 PPEF2O14830 753 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 SYN3O14994 580 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 PSTPIP1O43586 416 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 BUB1BO60566 1050 aaPredicted RBP6.53□□□□□ -1.36
LIG3-206ENST00000586058 UPP2O95045 317 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 TIMP1P01033 207 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 ALDH2P05091 517 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 PDGFRBP09619 1106 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 MMP8P22894 467 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 RRM1P23921 792 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 SSTR3P32745 418 aaPredicted RBP6.53□□□□□ -1.36
LIG3-206ENST00000586058 MAN1A1P33908 653 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 ALDH7A1P49419 539 aaKnown RBP6.53□□□□□ -1.36
LIG3-206ENST00000586058 GSCP56915 257 aaPredicted RBP6.53□□□□□ -1.36
LIG3-206ENST00000586058 PSMC1P62191 440 aaKnown RBP6.53□□□□□ -1.36
LIG3-206ENST00000586058 PDE4CQ08493 712 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 ORC1Q13415 861 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 PIGHQ14442 188 aaPredicted RBP6.53□□□□□ -1.36
LIG3-206ENST00000586058 ZNF268Q14587 947 aaPredicted RBP6.53□□□□□ -1.36
LIG3-206ENST00000586058 SMC1AQ14683 1233 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms